RNA–Protein interactions for RNA: ENSMUST00000113054.8

Shroom3-202, Transcript of Protein Shroom3, mousemouse

TSL 1 (best) BASIC

Gene Shroom3, Length 6,401 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3-202ENSMUST00000113054 Rhox8Q6VSS7 320 aa26.15■■□□□ 1.78
Shroom3-202ENSMUST00000113054 Ehmt2Q9Z148 1263 aaKnown RBP23.77■■□□□ 1.4
Shroom3-202ENSMUST00000113054 Ccdc136Q3TVA9 1136 aa23.17■■□□□ 1.3
Shroom3-202ENSMUST00000113054 Esf1Q3V1V3 845 aaKnown RBP23.17■■□□□ 1.3
Shroom3-202ENSMUST00000113054 Cngb1E1AZ71 1325 aa23.16■■□□□ 1.3
Shroom3-202ENSMUST00000113054 Ube2uB1AUC4 352 aa23.12■■□□□ 1.29
Shroom3-202ENSMUST00000113054 Wdr66E9Q743 1299 aa22.97■■□□□ 1.27
Shroom3-202ENSMUST00000113054 Zeb1Q64318 1117 aa22.93■■□□□ 1.26
Shroom3-202ENSMUST00000113054 Gab3Q8BSM5 595 aa22.88■■□□□ 1.25
Shroom3-202ENSMUST00000113054 Rpgrip1Q9EPQ2 1331 aa22.69■■□□□ 1.22
Shroom3-202ENSMUST00000113054 Npm2Q80W85 207 aa22.68■■□□□ 1.22
Shroom3-202ENSMUST00000113054 Las1lA2BE28 776 aaKnown RBP22.66■■□□□ 1.22
Shroom3-202ENSMUST00000113054 Myt1lP97500 1187 aa22.59■■□□□ 1.21
Shroom3-202ENSMUST00000113054 Trim41Q5NCC3 630 aa22.18■■□□□ 1.14
Shroom3-202ENSMUST00000113054 Pelp1Q9DBD5 1123 aaKnown RBP22.14■■□□□ 1.13
Shroom3-202ENSMUST00000113054 Slc24a1Q91WD8 1130 aa21.98■■□□□ 1.11
Shroom3-202ENSMUST00000113054 UbtfP25976 765 aaKnown RBP21.94■■□□□ 1.1
Shroom3-202ENSMUST00000113054 Il27Q8K3I6 234 aa21.85■■□□□ 1.09
Shroom3-202ENSMUST00000113054 Amer1Q7TS75 1132 aa21.73■■□□□ 1.07
Shroom3-202ENSMUST00000113054 Ap3b1Q9Z1T1 1105 aa21.56■■□□□ 1.04
Shroom3-202ENSMUST00000113054 NischQ80TM9 1593 aa21.53■■□□□ 1.04
Shroom3-202ENSMUST00000113054 Neurod1Q60867 357 aa21.48■■□□□ 1.03
Shroom3-202ENSMUST00000113054 Os9Q8K2C7 672 aa21.34■■□□□ 1.01
Shroom3-202ENSMUST00000113054 Fam50aQ9WV03 339 aaKnown RBP21.32■■□□□ 1
Shroom3-202ENSMUST00000113054 Ppargc1bQ8VHJ7 1014 aa21.27■■□□□ 1
Shroom3-202ENSMUST00000113054 CenpbP27790 599 aa21.27■□□□□ 0.99
Shroom3-202ENSMUST00000113054 Ttbk1Q6PCN3 1308 aa21.22■□□□□ 0.99
Shroom3-202ENSMUST00000113054 NefmP08553 848 aa21.21■□□□□ 0.99
Shroom3-202ENSMUST00000113054 Stra8P70278 393 aa21.2■□□□□ 0.98
Shroom3-202ENSMUST00000113054 Acin1Q9JIX8 1338 aaKnown RBP21.16■□□□□ 0.98
Shroom3-202ENSMUST00000113054 Eif5bQ05D44 1216 aaKnown RBP21.15■□□□□ 0.98
Shroom3-202ENSMUST00000113054 Zbtb7cQ8VCZ7 619 aa21.15■□□□□ 0.98
Shroom3-202ENSMUST00000113054 NclP09405 707 aaKnown RBP21.05■□□□□ 0.96
Shroom3-202ENSMUST00000113054 Gm35339A0A140LHH9 1649 aa21.03■□□□□ 0.96
Shroom3-202ENSMUST00000113054 NrdcQ8BHG1 1161 aa21.03■□□□□ 0.96
Shroom3-202ENSMUST00000113054 Ifnlr1Q8CGK5 535 aa21.02■□□□□ 0.96
Shroom3-202ENSMUST00000113054 HrcG5E8J6 738 aa20.98■□□□□ 0.95
Shroom3-202ENSMUST00000113054 Chic1Q8CBW7 227 aa20.96■□□□□ 0.95
Shroom3-202ENSMUST00000113054 Abcc9P70170 1546 aa20.95■□□□□ 0.95
Shroom3-202ENSMUST00000113054 Anp32bQ9EST5 272 aaKnown RBP20.92■□□□□ 0.94
Shroom3-202ENSMUST00000113054 Zcchc6Q5BLK4 1491 aaKnown RBP20.89■□□□□ 0.93
Shroom3-202ENSMUST00000113054 Cdk11bP24788 784 aaKnown RBP20.88■□□□□ 0.93
Shroom3-202ENSMUST00000113054 4933416C03RikQ3V063 378 aa20.87■□□□□ 0.93
Shroom3-202ENSMUST00000113054 NeflP08551 543 aa20.83■□□□□ 0.92
Shroom3-202ENSMUST00000113054 Gm13697A2AK42 830 aa20.82■□□□□ 0.92
Shroom3-202ENSMUST00000113054 Zbtb4Q5F293 982 aa20.8■□□□□ 0.92
Shroom3-202ENSMUST00000113054 Hnrnpul2Q00PI9 745 aaKnown RBP20.79■□□□□ 0.92
Shroom3-202ENSMUST00000113054 Plppr3Q7TPB0 716 aa20.78■□□□□ 0.92
Shroom3-202ENSMUST00000113054 Lmod2Q3UHZ5 550 aa20.75■□□□□ 0.91
Shroom3-202ENSMUST00000113054 Prdm10Q3UTQ7 1184 aa20.68■□□□□ 0.9
Shroom3-202ENSMUST00000113054 4930567H17RikQ3V0K5 233 aa20.67■□□□□ 0.9
Shroom3-202ENSMUST00000113054 Nop58Q6DFW4 536 aaKnown RBP20.65■□□□□ 0.9
Shroom3-202ENSMUST00000113054 Atp1b4Q99ME6 356 aa20.65■□□□□ 0.9
Shroom3-202ENSMUST00000113054 Erich6D3Z6S9 713 aa20.61■□□□□ 0.89
Shroom3-202ENSMUST00000113054 Npm1Q61937 292 aaKnown RBP20.56■□□□□ 0.88
Shroom3-202ENSMUST00000113054 Ccdc180J3QNE4 1664 aa20.55■□□□□ 0.88
Shroom3-202ENSMUST00000113054 TonslQ6NZL6 1363 aa20.54■□□□□ 0.88
Shroom3-202ENSMUST00000113054 Fkbp15Q6P9Q6 1216 aaKnown RBP20.52■□□□□ 0.88
Shroom3-202ENSMUST00000113054 Pcgf6Q99NA9 353 aa20.52■□□□□ 0.87
Shroom3-202ENSMUST00000113054 Plekhg3Q4VAC9 1341 aa20.49■□□□□ 0.87
Shroom3-202ENSMUST00000113054 Gm13695A2AK44 830 aa20.42■□□□□ 0.86
Shroom3-202ENSMUST00000113054 Mapk8ip2Q9ERE9 830 aa20.41■□□□□ 0.86
Shroom3-202ENSMUST00000113054 Tnnt3Q9QZ47 272 aa20.41■□□□□ 0.86
Shroom3-202ENSMUST00000113054 Supt5hO55201 1082 aaKnown RBP20.39■□□□□ 0.85
Shroom3-202ENSMUST00000113054 Polr3glQ8R0C0 218 aa20.39■□□□□ 0.85
Shroom3-202ENSMUST00000113054 Mier1Q5UAK0 511 aa20.38■□□□□ 0.85
Shroom3-202ENSMUST00000113054 Nlrp6Q91WS2 869 aa20.31■□□□□ 0.84
Shroom3-202ENSMUST00000113054 Rangap1P46061 589 aaKnown RBP20.26■□□□□ 0.83
Shroom3-202ENSMUST00000113054 ArxO35085 564 aa20.25■□□□□ 0.83
Shroom3-202ENSMUST00000113054 Eid3Q3V124 375 aa20.14■□□□□ 0.81
Shroom3-202ENSMUST00000113054 Rtl1Q7M732 1744 aa20.1■□□□□ 0.81
Shroom3-202ENSMUST00000113054 Csrnp3P59055 597 aa20.07■□□□□ 0.8
Shroom3-202ENSMUST00000113054 DiexfQ8BTT6 772 aaKnown RBP20.05■□□□□ 0.8
Shroom3-202ENSMUST00000113054 DaxxO35613 739 aa19.99■□□□□ 0.79
Shroom3-202ENSMUST00000113054 Gm38655A0A286YDK6 273 aa19.98■□□□□ 0.79
Shroom3-202ENSMUST00000113054 Safb2Q80YR5 991 aaKnown RBP19.91■□□□□ 0.78
Shroom3-202ENSMUST00000113054 Chic2Q9D9G3 165 aa19.86■□□□□ 0.77
Shroom3-202ENSMUST00000113054 Ubl4bQ9CQ84 188 aa19.86■□□□□ 0.77
Shroom3-202ENSMUST00000113054 P3h3Q8CG70 732 aa19.85■□□□□ 0.77
Shroom3-202ENSMUST00000113054 Rad21Q61550 635 aaKnown RBP19.83■□□□□ 0.76
Shroom3-202ENSMUST00000113054 ClspnQ80YR7 1315 aa19.81■□□□□ 0.76
Shroom3-202ENSMUST00000113054 Myt1Q8CFC2 1127 aa19.8■□□□□ 0.76
Shroom3-202ENSMUST00000113054 Irx6Q9ER75 438 aa19.75■□□□□ 0.75
Shroom3-202ENSMUST00000113054 Clip1Q922J3 1391 aa19.75■□□□□ 0.75
Shroom3-202ENSMUST00000113054 Anp32aO35381 247 aa19.71■□□□□ 0.75
Shroom3-202ENSMUST00000113054 Trim26Q99PN3 545 aa19.69■□□□□ 0.74
Shroom3-202ENSMUST00000113054 Rtl5Q5DTT4 599 aa19.64■□□□□ 0.73
Shroom3-202ENSMUST00000113054 Hdac5Q9Z2V6 1113 aa19.63■□□□□ 0.73
Shroom3-202ENSMUST00000113054 Vsig10D3YX43 558 aa19.6■□□□□ 0.73
Shroom3-202ENSMUST00000113054 Ythdc1E9Q5K9 736 aaKnown RBP19.57■□□□□ 0.72
Shroom3-202ENSMUST00000113054 Fgd1P52734 960 aa19.51■□□□□ 0.71
Shroom3-202ENSMUST00000113054 Ppp4r2Q0VGB7 417 aa19.51■□□□□ 0.71
Shroom3-202ENSMUST00000113054 Sall2Q9QX96 1004 aa19.5■□□□□ 0.71
Shroom3-202ENSMUST00000113054 CatipB9EKE5 520 aa19.48■□□□□ 0.71
Shroom3-202ENSMUST00000113054 Hsp90aa1P07901 733 aaKnown RBP19.45■□□□□ 0.7
Shroom3-202ENSMUST00000113054 BlmO88700 1416 aa19.43■□□□□ 0.7
Shroom3-202ENSMUST00000113054 MyclP10166 368 aa19.43■□□□□ 0.7
Shroom3-202ENSMUST00000113054 DekQ7TNV0 380 aaKnown RBP19.43■□□□□ 0.7
Shroom3-202ENSMUST00000113054 Brd4Q9ESU6 1400 aaKnown RBP19.43■□□□□ 0.7
Shroom3-202ENSMUST00000113054 Rgl3Q3UYI5 709 aa19.42■□□□□ 0.7
Retrieved 100 of 22,080 RNA–protein pairs in 58.9 ms