Protein–RNA interactions for Protein: Q9Y6V0

PCLO, Protein piccolo, humanhuman

Predictions only

Length 5,065 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCLOQ9Y6V0 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC22.15■■□□□ 1.14
PCLOQ9Y6V0 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC22.02■■□□□ 1.11
PCLOQ9Y6V0 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCLOQ9Y6V0 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCLOQ9Y6V0 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
PCLOQ9Y6V0 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PCLOQ9Y6V0 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCLOQ9Y6V0 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
PCLOQ9Y6V0 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCLOQ9Y6V0 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC21.06■□□□□ 0.96
PCLOQ9Y6V0 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCLOQ9Y6V0 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
PCLOQ9Y6V0 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC20.89■□□□□ 0.94
PCLOQ9Y6V0 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCLOQ9Y6V0 ZNRF2P1-201ENST00000441407 443 ntBASIC20.81■□□□□ 0.92
PCLOQ9Y6V0 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCLOQ9Y6V0 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PCLOQ9Y6V0 AC006077.2-201ENST00000623591 457 ntBASIC20.66■□□□□ 0.9
PCLOQ9Y6V0 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
PCLOQ9Y6V0 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
PCLOQ9Y6V0 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCLOQ9Y6V0 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC20.45■□□□□ 0.86
PCLOQ9Y6V0 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC20.45■□□□□ 0.86
PCLOQ9Y6V0 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC20.42■□□□□ 0.86
PCLOQ9Y6V0 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCLOQ9Y6V0 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC20.38■□□□□ 0.85
PCLOQ9Y6V0 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PCLOQ9Y6V0 INO80B-203ENST00000409917 796 ntTSL 2 BASIC20.3■□□□□ 0.84
PCLOQ9Y6V0 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PCLOQ9Y6V0 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCLOQ9Y6V0 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCLOQ9Y6V0 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
PCLOQ9Y6V0 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCLOQ9Y6V0 AP002365.1-201ENST00000603448 772 ntBASIC20.18■□□□□ 0.82
PCLOQ9Y6V0 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC20.16■□□□□ 0.82
PCLOQ9Y6V0 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC20.15■□□□□ 0.82
PCLOQ9Y6V0 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
PCLOQ9Y6V0 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PCLOQ9Y6V0 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.8
PCLOQ9Y6V0 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCLOQ9Y6V0 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC20.04■□□□□ 0.8
PCLOQ9Y6V0 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCLOQ9Y6V0 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
PCLOQ9Y6V0 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC19.95■□□□□ 0.78
PCLOQ9Y6V0 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC19.93■□□□□ 0.78
PCLOQ9Y6V0 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
PCLOQ9Y6V0 RPS2P35-201ENST00000443417 897 ntBASIC19.83■□□□□ 0.76
PCLOQ9Y6V0 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PCLOQ9Y6V0 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC19.83■□□□□ 0.76
PCLOQ9Y6V0 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC19.75■□□□□ 0.75
PCLOQ9Y6V0 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC19.73■□□□□ 0.75
PCLOQ9Y6V0 AC015813.7-201ENST00000623294 581 ntBASIC19.69■□□□□ 0.74
PCLOQ9Y6V0 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC19.67■□□□□ 0.74
PCLOQ9Y6V0 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC19.67■□□□□ 0.74
PCLOQ9Y6V0 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
PCLOQ9Y6V0 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
PCLOQ9Y6V0 AL356512.1-201ENST00000607453 1739 ntBASIC19.61■□□□□ 0.73
PCLOQ9Y6V0 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC19.59■□□□□ 0.73
PCLOQ9Y6V0 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCLOQ9Y6V0 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC19.52■□□□□ 0.72
PCLOQ9Y6V0 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
PCLOQ9Y6V0 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCLOQ9Y6V0 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC19.48■□□□□ 0.71
PCLOQ9Y6V0 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCLOQ9Y6V0 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PCLOQ9Y6V0 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC19.46■□□□□ 0.71
PCLOQ9Y6V0 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC19.43■□□□□ 0.7
PCLOQ9Y6V0 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
PCLOQ9Y6V0 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PCLOQ9Y6V0 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCLOQ9Y6V0 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCLOQ9Y6V0 SUZ12P1-203ENST00000578195 985 ntBASIC19.3■□□□□ 0.68
PCLOQ9Y6V0 RARRES2P7-201ENST00000567349 469 ntBASIC19.29■□□□□ 0.68
PCLOQ9Y6V0 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PCLOQ9Y6V0 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC19.25■□□□□ 0.67
PCLOQ9Y6V0 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC19.24■□□□□ 0.67
PCLOQ9Y6V0 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCLOQ9Y6V0 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
PCLOQ9Y6V0 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCLOQ9Y6V0 HLA-V-202ENST00000446817 847 ntBASIC19.19■□□□□ 0.66
PCLOQ9Y6V0 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCLOQ9Y6V0 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCLOQ9Y6V0 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCLOQ9Y6V0 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCLOQ9Y6V0 DYNLL1-208ENST00000550178 581 ntBASIC19.18■□□□□ 0.66
PCLOQ9Y6V0 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC19.16■□□□□ 0.66
PCLOQ9Y6V0 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC19.16■□□□□ 0.66
PCLOQ9Y6V0 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
PCLOQ9Y6V0 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PCLOQ9Y6V0 AC136428.2-201ENST00000563187 214 ntBASIC19.12■□□□□ 0.65
PCLOQ9Y6V0 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
PCLOQ9Y6V0 AC097358.2-201ENST00000607541 1159 ntBASIC19.11■□□□□ 0.65
PCLOQ9Y6V0 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC19.11■□□□□ 0.65
PCLOQ9Y6V0 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCLOQ9Y6V0 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCLOQ9Y6V0 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PCLOQ9Y6V0 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC19.07■□□□□ 0.64
PCLOQ9Y6V0 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC19.07■□□□□ 0.64
PCLOQ9Y6V0 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC19.07■□□□□ 0.64
PCLOQ9Y6V0 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms