Protein–RNA interactions for Protein: Q96QR1

SCGB3A1, Secretoglobin family 3A member 1, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCGB3A1Q96QR1 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC25.64■■□□□ 1.7
SCGB3A1Q96QR1 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC24.08■■□□□ 1.45
SCGB3A1Q96QR1 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC23.75■■□□□ 1.39
SCGB3A1Q96QR1 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SCGB3A1Q96QR1 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SCGB3A1Q96QR1 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
SCGB3A1Q96QR1 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SCGB3A1Q96QR1 HES6-203ENST00000409160 1600 ntTSL 2 BASIC23.04■■□□□ 1.28
SCGB3A1Q96QR1 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SCGB3A1Q96QR1 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
SCGB3A1Q96QR1 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC22.78■■□□□ 1.24
SCGB3A1Q96QR1 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC22.77■■□□□ 1.24
SCGB3A1Q96QR1 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC22.71■■□□□ 1.23
SCGB3A1Q96QR1 AL356512.1-201ENST00000607453 1739 ntBASIC22.67■■□□□ 1.22
SCGB3A1Q96QR1 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
SCGB3A1Q96QR1 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SCGB3A1Q96QR1 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
SCGB3A1Q96QR1 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC22.56■■□□□ 1.2
SCGB3A1Q96QR1 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC22.5■■□□□ 1.19
SCGB3A1Q96QR1 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
SCGB3A1Q96QR1 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
SCGB3A1Q96QR1 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SCGB3A1Q96QR1 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC21.94■■□□□ 1.1
SCGB3A1Q96QR1 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SCGB3A1Q96QR1 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
SCGB3A1Q96QR1 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC21.9■■□□□ 1.1
SCGB3A1Q96QR1 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SCGB3A1Q96QR1 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
SCGB3A1Q96QR1 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
SCGB3A1Q96QR1 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SCGB3A1Q96QR1 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
SCGB3A1Q96QR1 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SCGB3A1Q96QR1 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SCGB3A1Q96QR1 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SCGB3A1Q96QR1 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SCGB3A1Q96QR1 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
SCGB3A1Q96QR1 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SCGB3A1Q96QR1 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
SCGB3A1Q96QR1 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SCGB3A1Q96QR1 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
SCGB3A1Q96QR1 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SCGB3A1Q96QR1 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
SCGB3A1Q96QR1 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SCGB3A1Q96QR1 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SCGB3A1Q96QR1 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC21.41■■□□□ 1.02
SCGB3A1Q96QR1 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SCGB3A1Q96QR1 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
SCGB3A1Q96QR1 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SCGB3A1Q96QR1 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC21.31■■□□□ 1
SCGB3A1Q96QR1 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC21.3■■□□□ 1
SCGB3A1Q96QR1 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
SCGB3A1Q96QR1 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SCGB3A1Q96QR1 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
SCGB3A1Q96QR1 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
SCGB3A1Q96QR1 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SCGB3A1Q96QR1 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC21.17■□□□□ 0.98
SCGB3A1Q96QR1 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SCGB3A1Q96QR1 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SCGB3A1Q96QR1 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
SCGB3A1Q96QR1 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC21.14■□□□□ 0.98
SCGB3A1Q96QR1 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SCGB3A1Q96QR1 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SCGB3A1Q96QR1 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SCGB3A1Q96QR1 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SCGB3A1Q96QR1 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SCGB3A1Q96QR1 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.96
SCGB3A1Q96QR1 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SCGB3A1Q96QR1 ILK-212ENST00000532063 1617 ntTSL 2 BASIC20.99■□□□□ 0.95
SCGB3A1Q96QR1 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC20.97■□□□□ 0.95
SCGB3A1Q96QR1 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SCGB3A1Q96QR1 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SCGB3A1Q96QR1 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SCGB3A1Q96QR1 ST7-205ENST00000393446 2114 ntTSL 5 BASIC20.93■□□□□ 0.94
SCGB3A1Q96QR1 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
SCGB3A1Q96QR1 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
SCGB3A1Q96QR1 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SCGB3A1Q96QR1 ST7-202ENST00000323984 2142 ntTSL 5 BASIC20.89■□□□□ 0.94
SCGB3A1Q96QR1 ST7-207ENST00000393449 2127 ntTSL 5 BASIC20.89■□□□□ 0.94
SCGB3A1Q96QR1 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SCGB3A1Q96QR1 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SCGB3A1Q96QR1 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SCGB3A1Q96QR1 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
SCGB3A1Q96QR1 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC20.85■□□□□ 0.93
SCGB3A1Q96QR1 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SCGB3A1Q96QR1 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SCGB3A1Q96QR1 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC20.81■□□□□ 0.92
SCGB3A1Q96QR1 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SCGB3A1Q96QR1 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC20.8■□□□□ 0.92
SCGB3A1Q96QR1 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SCGB3A1Q96QR1 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC20.78■□□□□ 0.92
SCGB3A1Q96QR1 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SCGB3A1Q96QR1 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SCGB3A1Q96QR1 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
SCGB3A1Q96QR1 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SCGB3A1Q96QR1 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SCGB3A1Q96QR1 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
SCGB3A1Q96QR1 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
SCGB3A1Q96QR1 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SCGB3A1Q96QR1 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC20.69■□□□□ 0.9
SCGB3A1Q96QR1 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 717.8 ms