RNA–Protein interactions for RNA: ENST00000414711.5

CPNE1-208, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-208ENST00000414711 NISCHQ9Y2I1 1504 aa41.04■■■■■ 4.16
CPNE1-208ENST00000414711 ABCC9O60706 1549 aa38.33■■■■□ 3.73
CPNE1-208ENST00000414711 CCDC180Q9P1Z9 1646 aa37.32■■■■□ 3.56
CPNE1-208ENST00000414711 DNAJC5BQ9UF47 199 aa36.82■■■■□ 3.48
CPNE1-208ENST00000414711 RB1CC1Q8TDY2 1594 aa36.02■■■■□ 3.36
CPNE1-208ENST00000414711 NACADO15069 1562 aa35.51■■■■□ 3.28
CPNE1-208ENST00000414711 PABPN1Q86U42 306 aaKnown RBP eCLIP35.47■■■■□ 3.27
CPNE1-208ENST00000414711 UNC13AQ9UPW8 1703 aa35.18■■■■□ 3.22
CPNE1-208ENST00000414711 DCAF8L2P0C7V8 631 aa35.02■■■■□ 3.2
CPNE1-208ENST00000414711 BICRAQ9NZM4 1560 aa35.01■■■■□ 3.2
CPNE1-208ENST00000414711 MYO15BQ96JP2 1530 aa34.68■■■■□ 3.14
CPNE1-208ENST00000414711 CECR2Q9BXF3 1484 aa34.65■■■■□ 3.14
CPNE1-208ENST00000414711 DNAJC5Q9H3Z4 198 aa34.59■■■■□ 3.13
CPNE1-208ENST00000414711 CC2D2AQ9P2K1 1620 aa34.57■■■■□ 3.12
CPNE1-208ENST00000414711 SHROOM4Q9ULL8 1493 aa34.47■■■■□ 3.11
CPNE1-208ENST00000414711 EIF4G1Q04637 1599 aaKnown RBP34.25■■■■□ 3.07
CPNE1-208ENST00000414711 SCRIBQ14160 1630 aa33.94■■■■□ 3.02
CPNE1-208ENST00000414711 DCAF1Q9Y4B6 1507 aa33.84■■■■□ 3.01
CPNE1-208ENST00000414711 ZCCHC6Q5VYS8 1495 aaKnown RBP33.82■■■■□ 3.01
CPNE1-208ENST00000414711 CUX2O14529 1486 aa33.49■■■□□ 2.95
CPNE1-208ENST00000414711 ERCC6Q03468 1493 aa33.18■■■□□ 2.9
CPNE1-208ENST00000414711 NCAPD3P42695 1498 aa32.79■■■□□ 2.84
CPNE1-208ENST00000414711 TRIM41Q8WV44 630 aa32.66■■■□□ 2.82
CPNE1-208ENST00000414711 NESP48681 1621 aa32.62■■■□□ 2.81
CPNE1-208ENST00000414711 ATAD2BQ9ULI0 1458 aa32.54■■■□□ 2.8
CPNE1-208ENST00000414711 THOC2Q8NI27 1593 aaKnown RBP32.54■■■□□ 2.8
CPNE1-208ENST00000414711 HMGXB3Q12766 1538 aa32.48■■■□□ 2.79
CPNE1-208ENST00000414711 SMARCA2P51531 1590 aa32.41■■■□□ 2.78
CPNE1-208ENST00000414711 SMARCA4P51532 1647 aa32.26■■■□□ 2.76
CPNE1-208ENST00000414711 LAMC3Q9Y6N6 1575 aa32.23■■■□□ 2.75
CPNE1-208ENST00000414711 BAZ1BQ9UIG0 1483 aaKnown RBP32.19■■■□□ 2.74
CPNE1-208ENST00000414711 KIF21AQ7Z4S6 1674 aa32.17■■■□□ 2.74
CPNE1-208ENST00000414711 PDS5BQ9NTI5 1447 aa32.07■■■□□ 2.72
CPNE1-208ENST00000414711 PEG3Q9GZU2 1588 aa31.95■■■□□ 2.71
CPNE1-208ENST00000414711 BAZ1AQ9NRL2 1556 aaPredicted RBP31.94■■■□□ 2.7
CPNE1-208ENST00000414711 MRC2Q9UBG0 1479 aa31.89■■■□□ 2.7
CPNE1-208ENST00000414711 WDR62O43379 1518 aa31.85■■■□□ 2.69
CPNE1-208ENST00000414711 CADPSQ9ULU8 1353 aa31.73■■■□□ 2.67
CPNE1-208ENST00000414711 OSCARQ8IYS5 282 aa31.7■■■□□ 2.67
CPNE1-208ENST00000414711 MROH2BQ7Z745 1585 aa31.61■■■□□ 2.65
CPNE1-208ENST00000414711 CEP164Q9UPV0 1460 aa31.55■■■□□ 2.64
CPNE1-208ENST00000414711 RIMBP3CA6NJZ7 1639 aa31.47■■■□□ 2.63
CPNE1-208ENST00000414711 RIMBP3BA6NNM3 1639 aa31.47■■■□□ 2.63
CPNE1-208ENST00000414711 RIMBP3Q9UFD9 1639 aa31.47■■■□□ 2.63
CPNE1-208ENST00000414711 FANCD2Q9BXW9 1451 aa31.4■■■□□ 2.62
CPNE1-208ENST00000414711 ARHGEF11O15085 1522 aa31.28■■■□□ 2.6
CPNE1-208ENST00000414711 URB2Q14146 1524 aaKnown RBP31.21■■■□□ 2.59
CPNE1-208ENST00000414711 WIZO95785 1651 aa31.17■■■□□ 2.58
CPNE1-208ENST00000414711 CFTRP13569 1480 aa31.17■■■□□ 2.58
CPNE1-208ENST00000414711 TRHP20396 242 aaPredicted RBP31.04■■■□□ 2.56
CPNE1-208ENST00000414711 CYB5RLQ6IPT4 315 aa31.04■■■□□ 2.56
CPNE1-208ENST00000414711 ZNF608Q9ULD9 1512 aaPredicted RBP31■■■□□ 2.55
CPNE1-208ENST00000414711 IFT140Q96RY7 1462 aa30.95■■■□□ 2.54
CPNE1-208ENST00000414711 AEBP2Q6ZN18 517 aaPredicted RBP30.92■■■□□ 2.54
CPNE1-208ENST00000414711 ARAP1Q96P48 1450 aa30.9■■■□□ 2.54
CPNE1-208ENST00000414711 EIF4G3O43432 1585 aaKnown RBP30.8■■■□□ 2.52
CPNE1-208ENST00000414711 PRDM2Q13029 1718 aa30.77■■■□□ 2.52
CPNE1-208ENST00000414711 CHD1O14646 1710 aa30.75■■■□□ 2.51
CPNE1-208ENST00000414711 TOP2AP11388 1531 aaKnown RBP30.74■■■□□ 2.51
CPNE1-208ENST00000414711 RSF1Q96T23 1441 aaPredicted RBP30.73■■■□□ 2.51
CPNE1-208ENST00000414711 TOPBP1Q92547 1522 aa30.69■■■□□ 2.5
CPNE1-208ENST00000414711 AQRO60306 1485 aaKnown RBP eCLIP30.56■■■□□ 2.487e-7■■■■□ 21.9
CPNE1-208ENST00000414711 FBLN2P98095 1184 aa30.55■■■□□ 2.48
CPNE1-208ENST00000414711 ABCC8Q09428 1581 aa30.52■■■□□ 2.48
CPNE1-208ENST00000414711 DNMBPQ6XZF7 1577 aa30.49■■■□□ 2.47
CPNE1-208ENST00000414711 TARBP1Q13395 1621 aaKnown RBP30.49■■■□□ 2.47
CPNE1-208ENST00000414711 CLASP1Q7Z460 1538 aa30.39■■■□□ 2.46
CPNE1-208ENST00000414711 CCDC88BA6NC98 1476 aa30.36■■■□□ 2.45
CPNE1-208ENST00000414711 POLA1P09884 1462 aaPredicted RBP30.31■■■□□ 2.44
CPNE1-208ENST00000414711 SYNJ1O43426 1573 aa30.27■■■□□ 2.44
CPNE1-208ENST00000414711 SNAPC4Q5SXM2 1469 aa30.26■■■□□ 2.44
CPNE1-208ENST00000414711 RAD54L2Q9Y4B4 1467 aa30.2■■■□□ 2.43
CPNE1-208ENST00000414711 TDRD9Q8NDG6 1382 aaKnown RBP30.2■■■□□ 2.43
CPNE1-208ENST00000414711 CHMP7Q8WUX9 453 aaPredicted RBP30.14■■■□□ 2.42
CPNE1-208ENST00000414711 WDR97A6NE52 1622 aa30.13■■■□□ 2.41
CPNE1-208ENST00000414711 GAPVD1Q14C86 1478 aa30.12■■■□□ 2.41
CPNE1-208ENST00000414711 MAGI1Q96QZ7 1491 aaPredicted RBP30.12■■■□□ 2.41
CPNE1-208ENST00000414711 SOGA1O94964 1423 aa30.12■■■□□ 2.41
CPNE1-208ENST00000414711 SYNJ2O15056 1496 aa30.04■■■□□ 2.4
CPNE1-208ENST00000414711 GRIN2BQ13224 1484 aa30.01■■■□□ 2.4
CPNE1-208ENST00000414711 FGD5Q6ZNL6 1462 aa29.97■■■□□ 2.39
CPNE1-208ENST00000414711 PBRM1Q86U86 1689 aa29.82■■■□□ 2.36
CPNE1-208ENST00000414711 ERCC6L2Q5T890 1561 aa29.82■■■□□ 2.36
CPNE1-208ENST00000414711 CUX1P39880 1505 aa29.78■■■□□ 2.36
CPNE1-208ENST00000414711 KIF13AQ9H1H9 1805 aa29.73■■■□□ 2.35
CPNE1-208ENST00000414711 ILDR1Q86SU0 546 aaPredicted RBP29.72■■■□□ 2.35
CPNE1-208ENST00000414711 CEP170Q5SW79 1584 aa29.69■■■□□ 2.34
CPNE1-208ENST00000414711 ABCA5Q8WWZ7 1642 aa29.64■■■□□ 2.34
CPNE1-208ENST00000414711 GRIN2AQ12879 1464 aa29.63■■■□□ 2.33
CPNE1-208ENST00000414711 NUP160Q12769 1436 aa29.57■■■□□ 2.32
CPNE1-208ENST00000414711 SHROOM2Q13796 1616 aa29.56■■■□□ 2.32
CPNE1-208ENST00000414711 ABCA10Q8WWZ4 1543 aa29.56■■■□□ 2.32
CPNE1-208ENST00000414711 KDM4FA0A1W2PPD8 638 aa29.52■■■□□ 2.32
CPNE1-208ENST00000414711 ADAMTS12P58397 1594 aa29.52■■■□□ 2.32
CPNE1-208ENST00000414711 ABCC10Q5T3U5 1492 aa29.46■■■□□ 2.31
CPNE1-208ENST00000414711 FAM69CQ0P6D2 419 aa29.44■■■□□ 2.3
CPNE1-208ENST00000414711 KDM6BO15054 1643 aa29.4■■■□□ 2.3
CPNE1-208ENST00000414711 DIP2BQ9P265 1576 aa29.38■■■□□ 2.29
CPNE1-208ENST00000414711 MAPKBP1O60336 1514 aa29.36■■■□□ 2.29
CPNE1-208ENST00000414711 PRG4Q92954 1404 aaPredicted RBP29.35■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms