RNA–Protein interactions for RNA: ENST00000422190.6

ATP2C1-203, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-203ENST00000422190 NISCHQ9Y2I1 1504 aa13.23□□□□□ -0.29
ATP2C1-203ENST00000422190 SHROOM4Q9ULL8 1493 aa11.33□□□□□ -0.6
ATP2C1-203ENST00000422190 CCDC180Q9P1Z9 1646 aa11.23□□□□□ -0.61
ATP2C1-203ENST00000422190 DCAF8L2P0C7V8 631 aa11.18□□□□□ -0.62
ATP2C1-203ENST00000422190 ZCCHC6Q5VYS8 1495 aaKnown RBP11.16□□□□□ -0.62
ATP2C1-203ENST00000422190 SUPT5HO00267 1087 aaKnown RBP11.08□□□□□ -0.64
ATP2C1-203ENST00000422190 DCAF1Q9Y4B6 1507 aa10.81□□□□□ -0.68
ATP2C1-203ENST00000422190 CHIC1Q5VXU3 224 aa10.68□□□□□ -0.7
ATP2C1-203ENST00000422190 ABCC9O60706 1549 aa10.62□□□□□ -0.71
ATP2C1-203ENST00000422190 SCRIBQ14160 1630 aa10.59□□□□□ -0.71
ATP2C1-203ENST00000422190 MYO15BQ96JP2 1530 aa10.55□□□□□ -0.72
ATP2C1-203ENST00000422190 RSF1Q96T23 1441 aaPredicted RBP10.46□□□□□ -0.73
ATP2C1-203ENST00000422190 NACADO15069 1562 aa10.45□□□□□ -0.74
ATP2C1-203ENST00000422190 LOC105371045A0A1W2PR82 267 aa10.39□□□□□ -0.75
ATP2C1-203ENST00000422190 CECR2Q9BXF3 1484 aa10.36□□□□□ -0.75
ATP2C1-203ENST00000422190 RB1CC1Q8TDY2 1594 aa10.31□□□□□ -0.76
ATP2C1-203ENST00000422190 TRIM41Q8WV44 630 aa10.31□□□□□ -0.76
ATP2C1-203ENST00000422190 MROH2BQ7Z745 1585 aa10.3□□□□□ -0.76
ATP2C1-203ENST00000422190 PCGF6Q9BYE7 350 aa10.28□□□□□ -0.76
ATP2C1-203ENST00000422190 FAM9AQ8IZU1 332 aaPredicted RBP10.26□□□□□ -0.77
ATP2C1-203ENST00000422190 WIZO95785 1651 aa10.22□□□□□ -0.77
ATP2C1-203ENST00000422190 EHMT2Q96KQ7 1210 aa10.21□□□□□ -0.78
ATP2C1-203ENST00000422190 PABPN1Q86U42 306 aaKnown RBP eCLIP10.18□□□□□ -0.78
ATP2C1-203ENST00000422190 BAZ1AQ9NRL2 1556 aaPredicted RBP10.17□□□□□ -0.78
ATP2C1-203ENST00000422190 HRCP23327 699 aa10.17□□□□□ -0.78
ATP2C1-203ENST00000422190 UNC13AQ9UPW8 1703 aa10.09□□□□□ -0.79
ATP2C1-203ENST00000422190 SMARCA4P51532 1647 aa10.08□□□□□ -0.8
ATP2C1-203ENST00000422190 TRIM26Q12899 539 aaPredicted RBP10.07□□□□□ -0.8
ATP2C1-203ENST00000422190 TOP2AP11388 1531 aaKnown RBP10.05□□□□□ -0.8
ATP2C1-203ENST00000422190 CCDC88BA6NC98 1476 aa10.04□□□□□ -0.8
ATP2C1-203ENST00000422190 BICRAQ9NZM4 1560 aa10.02□□□□□ -0.81
ATP2C1-203ENST00000422190 PPARGC1BQ86YN6 1023 aaKnown RBP10.01□□□□□ -0.81
ATP2C1-203ENST00000422190 SMARCA2P51531 1590 aa9.99□□□□□ -0.81
ATP2C1-203ENST00000422190 ABCC8Q09428 1581 aa9.99□□□□□ -0.81
ATP2C1-203ENST00000422190 EIF4G1Q04637 1599 aaKnown RBP9.98□□□□□ -0.81
ATP2C1-203ENST00000422190 SOGA1O94964 1423 aa9.9□□□□□ -0.83
ATP2C1-203ENST00000422190 ATAD2BQ9ULI0 1458 aa9.88□□□□□ -0.83
ATP2C1-203ENST00000422190 CSRNP3Q8WYN3 585 aa9.87□□□□□ -0.83
ATP2C1-203ENST00000422190 UBTFP17480 764 aaKnown RBP9.86□□□□□ -0.83
ATP2C1-203ENST00000422190 BAZ1BQ9UIG0 1483 aaKnown RBP9.86□□□□□ -0.83
ATP2C1-203ENST00000422190 PEG3Q9GZU2 1588 aa9.86□□□□□ -0.83
ATP2C1-203ENST00000422190 WRNQ14191 1432 aaPredicted RBP eCLIP9.85□□□□□ -0.83
ATP2C1-203ENST00000422190 RUSC2Q8N2Y8 1516 aa9.84□□□□□ -0.83
ATP2C1-203ENST00000422190 TTBK1Q5TCY1 1321 aaPredicted RBP9.84□□□□□ -0.83
ATP2C1-203ENST00000422190 ZEB1P37275 1124 aaPredicted RBP9.8□□□□□ -0.84
ATP2C1-203ENST00000422190 EEA1Q15075 1411 aa9.8□□□□□ -0.84
ATP2C1-203ENST00000422190 CEP162Q5TB80 1403 aa9.8□□□□□ -0.84
ATP2C1-203ENST00000422190 TNIKQ9UKE5 1360 aa9.78□□□□□ -0.84
ATP2C1-203ENST00000422190 SYNJ1O43426 1573 aa9.76□□□□□ -0.85
ATP2C1-203ENST00000422190 GOLGA3Q08378 1498 aa9.74□□□□□ -0.85
ATP2C1-203ENST00000422190 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.73□□□□□ -0.85
ATP2C1-203ENST00000422190 RANGAP1P46060 587 aaPredicted RBP9.73□□□□□ -0.85
ATP2C1-203ENST00000422190 CCER1Q8TC90 406 aaPredicted RBP9.7□□□□□ -0.86
ATP2C1-203ENST00000422190 NCAPD3P42695 1498 aa9.7□□□□□ -0.86
ATP2C1-203ENST00000422190 CEP164Q9UPV0 1460 aa9.69□□□□□ -0.86
ATP2C1-203ENST00000422190 HMGXB3Q12766 1538 aa9.65□□□□□ -0.86
ATP2C1-203ENST00000422190 CLIP1P30622 1438 aa9.65□□□□□ -0.86
ATP2C1-203ENST00000422190 RAPGEF2Q9Y4G8 1499 aa9.65□□□□□ -0.87
ATP2C1-203ENST00000422190 TOP2BQ02880 1626 aa9.63□□□□□ -0.87
ATP2C1-203ENST00000422190 KIF21BO75037 1637 aa9.62□□□□□ -0.87
ATP2C1-203ENST00000422190 APLP2Q06481 763 aa9.62□□□□□ -0.87
ATP2C1-203ENST00000422190 CFTRP13569 1480 aa9.59□□□□□ -0.87
ATP2C1-203ENST00000422190 CUX1P39880 1505 aa9.59□□□□□ -0.87
ATP2C1-203ENST00000422190 HNRNPUL2Q1KMD3 747 aaKnown RBP9.58□□□□□ -0.88
ATP2C1-203ENST00000422190 VPS8Q8N3P4 1428 aa9.57□□□□□ -0.88
ATP2C1-203ENST00000422190 BIVM-ERCC5R4GMW8 1640 aa9.57□□□□□ -0.88
ATP2C1-203ENST00000422190 KIF27Q86VH2 1401 aa9.56□□□□□ -0.88
ATP2C1-203ENST00000422190 CADPSQ9ULU8 1353 aa9.54□□□□□ -0.88
ATP2C1-203ENST00000422190 PRXQ9BXM0 1461 aa9.54□□□□□ -0.88
ATP2C1-203ENST00000422190 CC2D2AQ9P2K1 1620 aa9.5□□□□□ -0.89
ATP2C1-203ENST00000422190 ERICH3Q5RHP9 1530 aa9.5□□□□□ -0.89
ATP2C1-203ENST00000422190 CUX2O14529 1486 aa9.5□□□□□ -0.89
ATP2C1-203ENST00000422190 KANK4Q5T7N3 995 aaPredicted RBP9.47□□□□□ -0.89
ATP2C1-203ENST00000422190 IGF1RP08069 1367 aa9.47□□□□□ -0.89
ATP2C1-203ENST00000422190 ARAP1Q96P48 1450 aa9.46□□□□□ -0.89
ATP2C1-203ENST00000422190 FGD5Q6ZNL6 1462 aa9.45□□□□□ -0.9
ATP2C1-203ENST00000422190 FANCD2Q9BXW9 1451 aa9.44□□□□□ -0.9
ATP2C1-203ENST00000422190 CARMIL1Q5VZK9 1371 aa9.44□□□□□ -0.9
ATP2C1-203ENST00000422190 DIEXFQ68CQ4 756 aaKnown RBP9.43□□□□□ -0.9
ATP2C1-203ENST00000422190 NESP48681 1621 aa9.41□□□□□ -0.9
ATP2C1-203ENST00000422190 ARHGAP35Q9NRY4 1499 aa9.41□□□□□ -0.9
ATP2C1-203ENST00000422190 PRDM2Q13029 1718 aa9.41□□□□□ -0.9
ATP2C1-203ENST00000422190 P3H3Q8IVL6 736 aa9.41□□□□□ -0.9
ATP2C1-203ENST00000422190 RAD54L2Q9Y4B4 1467 aa9.39□□□□□ -0.91
ATP2C1-203ENST00000422190 ITGAEP38570 1179 aa9.39□□□□□ -0.91
ATP2C1-203ENST00000422190 ATP1B4Q9UN42 357 aaPredicted RBP9.39□□□□□ -0.91
ATP2C1-203ENST00000422190 DNAJC5BQ9UF47 199 aa9.38□□□□□ -0.91
ATP2C1-203ENST00000422190 ZNF316A6NFI3 1004 aaPredicted RBP9.38□□□□□ -0.91
ATP2C1-203ENST00000422190 TOPBP1Q92547 1522 aa9.35□□□□□ -0.91
ATP2C1-203ENST00000422190 POLA1P09884 1462 aaPredicted RBP9.35□□□□□ -0.91
ATP2C1-203ENST00000422190 DNMBPQ6XZF7 1577 aa9.34□□□□□ -0.91
ATP2C1-203ENST00000422190 CCNB3Q8WWL7 1395 aa9.33□□□□□ -0.92
ATP2C1-203ENST00000422190 TDRD9Q8NDG6 1382 aaKnown RBP9.31□□□□□ -0.92
ATP2C1-203ENST00000422190 ABCA10Q8WWZ4 1543 aa9.31□□□□□ -0.92
ATP2C1-203ENST00000422190 RRBP1Q9P2E9 1410 aaKnown RBP9.31□□□□□ -0.92
ATP2C1-203ENST00000422190 DHX57Q6P158 1386 aaKnown RBP9.3□□□□□ -0.92
ATP2C1-203ENST00000422190 SCAF1Q9H7N4 1312 aaKnown RBP9.3□□□□□ -0.92
ATP2C1-203ENST00000422190 FHOD3Q2V2M9 1422 aa9.29□□□□□ -0.92
ATP2C1-203ENST00000422190 FAM50AQ14320 339 aaKnown RBP9.29□□□□□ -0.92
ATP2C1-203ENST00000422190 URB2Q14146 1524 aaKnown RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms