RNA–Protein interactions for RNA: ENST00000548058.5

ACSS3-203, Transcript of acyl-CoA synthetase short chain family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ACSS3, Length 9,254 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSS3-203ENST00000548058 PELP1Q8IZL8 1130 aaKnown RBP19.39■□□□□ 0.69
ACSS3-203ENST00000548058 DCAF8L2P0C7V8 631 aa18.58■□□□□ 0.56
ACSS3-203ENST00000548058 CCER1Q8TC90 406 aaPredicted RBP18.45■□□□□ 0.54
ACSS3-203ENST00000548058 FAM9AQ8IZU1 332 aaPredicted RBP18.34■□□□□ 0.53
ACSS3-203ENST00000548058 ERICH6Q7L0X2 663 aa18.33■□□□□ 0.53
ACSS3-203ENST00000548058 YTHDC1Q96MU7 727 aaKnown RBP18.01■□□□□ 0.47
ACSS3-203ENST00000548058 APLP2Q06481 763 aa17.94■□□□□ 0.46
ACSS3-203ENST00000548058 MYT1Q01538 1121 aa17.84■□□□□ 0.45
ACSS3-203ENST00000548058 DAXXQ9UER7 740 aaPredicted RBP17.61■□□□□ 0.41
ACSS3-203ENST00000548058 NEFLP07196 543 aa17.54■□□□□ 0.4
ACSS3-203ENST00000548058 CENPBP07199 599 aaPredicted RBP17.52■□□□□ 0.4
ACSS3-203ENST00000548058 SUPT5HO00267 1087 aaKnown RBP17.21■□□□□ 0.35
ACSS3-203ENST00000548058 TTBK1Q5TCY1 1321 aaPredicted RBP17.14■□□□□ 0.33
ACSS3-203ENST00000548058 EHMT2Q96KQ7 1210 aa17.12■□□□□ 0.33
ACSS3-203ENST00000548058 ZNF316A6NFI3 1004 aaPredicted RBP17.01■□□□□ 0.31
ACSS3-203ENST00000548058 ZEB1P37275 1124 aaPredicted RBP17■□□□□ 0.31
ACSS3-203ENST00000548058 ATP1B4Q9UN42 357 aaPredicted RBP16.89■□□□□ 0.29
ACSS3-203ENST00000548058 RTL5Q5HYW3 569 aaPredicted RBP16.87■□□□□ 0.29
ACSS3-203ENST00000548058 CLSPNQ9HAW4 1339 aa16.78■□□□□ 0.28
ACSS3-203ENST00000548058 PCGF6Q9BYE7 350 aa16.77■□□□□ 0.28
ACSS3-203ENST00000548058 MYT1LQ9UL68 1186 aa16.75■□□□□ 0.27
ACSS3-203ENST00000548058 ZBTB47Q9UFB7 747 aaPredicted RBP16.68■□□□□ 0.26
ACSS3-203ENST00000548058 SLC4A1APQ9BWU0 796 aaKnown RBP16.6■□□□□ 0.25
ACSS3-203ENST00000548058 RANGAP1P46060 587 aaPredicted RBP16.52■□□□□ 0.23
ACSS3-203ENST00000548058 NEFMP07197 916 aa16.5■□□□□ 0.23
ACSS3-203ENST00000548058 SHROOM4Q9ULL8 1493 aa16.49■□□□□ 0.23
ACSS3-203ENST00000548058 POLR3GLQ9BT43 218 aa16.47■□□□□ 0.23
ACSS3-203ENST00000548058 ANP32BQ92688 251 aaKnown RBP16.42■□□□□ 0.22
ACSS3-203ENST00000548058 CDK11BP21127 795 aaKnown RBP16.4■□□□□ 0.22
ACSS3-203ENST00000548058 CDK11AQ9UQ88 783 aaPredicted RBP16.4■□□□□ 0.22
ACSS3-203ENST00000548058 GLIPR1L2Q4G1C9 344 aa16.39■□□□□ 0.21
ACSS3-203ENST00000548058 UBTFP17480 764 aaKnown RBP16.37■□□□□ 0.21
ACSS3-203ENST00000548058 CHIC1Q5VXU3 224 aa16.33■□□□□ 0.21
ACSS3-203ENST00000548058 SLC24A1O60721 1099 aa16.27■□□□□ 0.19
ACSS3-203ENST00000548058 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.25■□□□□ 0.19
ACSS3-203ENST00000548058 HNRNPUL2Q1KMD3 747 aaKnown RBP16.25■□□□□ 0.19
ACSS3-203ENST00000548058 NISCHQ9Y2I1 1504 aa16.2■□□□□ 0.18
ACSS3-203ENST00000548058 TRIM41Q8WV44 630 aa16.13■□□□□ 0.17
ACSS3-203ENST00000548058 CANXP27824 592 aaKnown RBP16.12■□□□□ 0.17
ACSS3-203ENST00000548058 HSP90AA1P07900 732 aaKnown RBP16.07■□□□□ 0.16
ACSS3-203ENST00000548058 CNGB1Q14028 1251 aaPredicted RBP16.02■□□□□ 0.15
ACSS3-203ENST00000548058 ANP32AP39687 249 aaKnown RBP15.92■□□□□ 0.14
ACSS3-203ENST00000548058 UPF2Q9HAU5 1272 aaKnown RBP15.92■□□□□ 0.14
ACSS3-203ENST00000548058 BCL11AQ9H165 835 aa15.91■□□□□ 0.14
ACSS3-203ENST00000548058 BCANQ96GW7 911 aa15.89■□□□□ 0.13
ACSS3-203ENST00000548058 TNNT2P45379 298 aaPredicted RBP15.89■□□□□ 0.13
ACSS3-203ENST00000548058 EIF5BO60841 1220 aaKnown RBP15.89■□□□□ 0.13
ACSS3-203ENST00000548058 ITGAEP38570 1179 aa15.86■□□□□ 0.13
ACSS3-203ENST00000548058 TRIM44Q96DX7 344 aaPredicted RBP15.7■□□□□ 0.1
ACSS3-203ENST00000548058 ESF1Q9H501 851 aaKnown RBP15.67■□□□□ 0.1
ACSS3-203ENST00000548058 NPM2Q86SE8 214 aaKnown RBP15.67■□□□□ 0.1
ACSS3-203ENST00000548058 TRIM26Q12899 539 aaPredicted RBP15.67■□□□□ 0.1
ACSS3-203ENST00000548058 ANP32CO43423 234 aa15.66■□□□□ 0.1
ACSS3-203ENST00000548058 ZRSR1Q15695 479 aaKnown RBP15.65■□□□□ 0.1
ACSS3-203ENST00000548058 KAT6BQ8WYB5 2073 aa15.6■□□□□ 0.09
ACSS3-203ENST00000548058 TRIM52Q96A61 297 aa15.57■□□□□ 0.08
ACSS3-203ENST00000548058 NCLP19338 710 aaKnown RBP15.55■□□□□ 0.08
ACSS3-203ENST00000548058 MYH16Q9H6N6 1097 aa15.54■□□□□ 0.08
ACSS3-203ENST00000548058 ANP32EQ9BTT0 268 aa15.53■□□□□ 0.08
ACSS3-203ENST00000548058 L1TD1Q5T7N2 865 aaKnown RBP15.5■□□□□ 0.07
ACSS3-203ENST00000548058 GOLGA6L6A8MZA4 724 aa15.49■□□□□ 0.07
ACSS3-203ENST00000548058 HRCP23327 699 aa15.48■□□□□ 0.07
ACSS3-203ENST00000548058 DIEXFQ68CQ4 756 aaKnown RBP15.48■□□□□ 0.07
ACSS3-203ENST00000548058 FAM50AQ14320 339 aaKnown RBP15.48■□□□□ 0.07
ACSS3-203ENST00000548058 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.48■□□□□ 0.07
ACSS3-203ENST00000548058 ZNF326Q5BKZ1 582 aaKnown RBP15.47■□□□□ 0.07
ACSS3-203ENST00000548058 NRDCO43847 1150 aa15.44■□□□□ 0.06
ACSS3-203ENST00000548058 GOLGA6L22H0YM25 854 aa15.43■□□□□ 0.06
ACSS3-203ENST00000548058 TULP1O00294 542 aaPredicted RBP15.43■□□□□ 0.06
ACSS3-203ENST00000548058 STAG3Q9UJ98 1225 aa15.43■□□□□ 0.06
ACSS3-203ENST00000548058 PPARGC1BQ86YN6 1023 aaKnown RBP15.42■□□□□ 0.06
ACSS3-203ENST00000548058 NCBP3Q53F19 620 aaKnown RBP15.42■□□□□ 0.06
ACSS3-203ENST00000548058 A0A0G2JS52 829 aa15.39■□□□□ 0.05
ACSS3-203ENST00000548058 PRM3Q9NNZ6 103 aa15.36■□□□□ 0.05
ACSS3-203ENST00000548058 DNTTIP2Q5QJE6 756 aaKnown RBP15.35■□□□□ 0.05
ACSS3-203ENST00000548058 SCAF1Q9H7N4 1312 aaKnown RBP15.33■□□□□ 0.05
ACSS3-203ENST00000548058 CASC1Q6TDU7 716 aa15.33■□□□□ 0.04
ACSS3-203ENST00000548058 KRI1Q8N9T8 703 aaKnown RBP15.33■□□□□ 0.04
ACSS3-203ENST00000548058 BECN1Q14457 450 aa15.33■□□□□ 0.04
ACSS3-203ENST00000548058 PTMAP06454 111 aaKnown RBP15.32■□□□□ 0.04
ACSS3-203ENST00000548058 KIAA2012Q0VF49 1180 aa15.31■□□□□ 0.04
ACSS3-203ENST00000548058 NEUROD1Q13562 356 aa15.3■□□□□ 0.04
ACSS3-203ENST00000548058 CLSTN1O94985 981 aa15.3■□□□□ 0.04
ACSS3-203ENST00000548058 NPHP1O15259 732 aa15.27■□□□□ 0.03
ACSS3-203ENST00000548058 CHAF1AQ13111 956 aaPredicted RBP15.27■□□□□ 0.03
ACSS3-203ENST00000548058 ARXQ96QS3 562 aa15.26■□□□□ 0.03
ACSS3-203ENST00000548058 NOC3LQ8WTT2 800 aaKnown RBP15.25■□□□□ 0.03
ACSS3-203ENST00000548058 USP35Q9P2H5 1018 aa15.22■□□□□ 0.03
ACSS3-203ENST00000548058 GOLGA2Q08379 1002 aa15.17■□□□□ 0.02
ACSS3-203ENST00000548058 DDRGK1Q96HY6 314 aa15.16■□□□□ 0.02
ACSS3-203ENST00000548058 CALRP27797 417 aaKnown RBP15.15■□□□□ 0.02
ACSS3-203ENST00000548058 PNNQ9H307 717 aaKnown RBP15.13■□□□□ 0.01
ACSS3-203ENST00000548058 HAP1P54257 671 aaPredicted RBP15.13■□□□□ 0.01
ACSS3-203ENST00000548058 WDR43Q15061 677 aaKnown RBP eCLIP15.11■□□□□ 0.01
ACSS3-203ENST00000548058 ERICH6BQ5W0A0 696 aa15.09■□□□□ 0.01
ACSS3-203ENST00000548058 NBR1Q14596 966 aa15.07■□□□□ 0
ACSS3-203ENST00000548058 EIF4G2P78344 907 aaKnown RBP eCLIP15.07■□□□□ 0
ACSS3-203ENST00000548058 FBLN2P98095 1184 aa15.07■□□□□ 0
ACSS3-203ENST00000548058 FGD1P98174 961 aa15.07■□□□□ 0
ACSS3-203ENST00000548058 PLPPR3Q6T4P5 718 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms