RNA–Protein interactions for RNA: ENST00000510168.5

ATP2C1-218, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene ATP2C1, Length 5,067 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-218ENST00000510168 DCAF8L2P0C7V8 631 aa27.75■■■□□ 2.03
ATP2C1-218ENST00000510168 SUPT5HO00267 1087 aaKnown RBP26.88■■□□□ 1.89
ATP2C1-218ENST00000510168 PELP1Q8IZL8 1130 aaKnown RBP26.86■■□□□ 1.89
ATP2C1-218ENST00000510168 EHMT2Q96KQ7 1210 aa26.08■■□□□ 1.77
ATP2C1-218ENST00000510168 SHROOM4Q9ULL8 1493 aa25.98■■□□□ 1.75
ATP2C1-218ENST00000510168 APLP2Q06481 763 aa25.8■■□□□ 1.72
ATP2C1-218ENST00000510168 CENPBP07199 599 aaPredicted RBP25.8■■□□□ 1.72
ATP2C1-218ENST00000510168 PCGF6Q9BYE7 350 aa25.79■■□□□ 1.72
ATP2C1-218ENST00000510168 ERICH6Q7L0X2 663 aa25.72■■□□□ 1.71
ATP2C1-218ENST00000510168 MYT1Q01538 1121 aa25.69■■□□□ 1.7
ATP2C1-218ENST00000510168 CCER1Q8TC90 406 aaPredicted RBP25.61■■□□□ 1.69
ATP2C1-218ENST00000510168 NISCHQ9Y2I1 1504 aa25.56■■□□□ 1.68
ATP2C1-218ENST00000510168 ZEB1P37275 1124 aaPredicted RBP25.55■■□□□ 1.68
ATP2C1-218ENST00000510168 FAM9AQ8IZU1 332 aaPredicted RBP25.4■■□□□ 1.66
ATP2C1-218ENST00000510168 TTBK1Q5TCY1 1321 aaPredicted RBP25.33■■□□□ 1.65
ATP2C1-218ENST00000510168 NEFLP07196 543 aa25.12■■□□□ 1.61
ATP2C1-218ENST00000510168 YTHDC1Q96MU7 727 aaKnown RBP24.98■■□□□ 1.59
ATP2C1-218ENST00000510168 HRCP23327 699 aa24.86■■□□□ 1.57
ATP2C1-218ENST00000510168 TRIM41Q8WV44 630 aa24.84■■□□□ 1.57
ATP2C1-218ENST00000510168 RANGAP1P46060 587 aaPredicted RBP24.77■■□□□ 1.56
ATP2C1-218ENST00000510168 UBTFP17480 764 aaKnown RBP24.59■■□□□ 1.53
ATP2C1-218ENST00000510168 ATP1B4Q9UN42 357 aaPredicted RBP24.57■■□□□ 1.52
ATP2C1-218ENST00000510168 TRIM26Q12899 539 aaPredicted RBP24.55■■□□□ 1.52
ATP2C1-218ENST00000510168 PPARGC1BQ86YN6 1023 aaKnown RBP24.44■■□□□ 1.5
ATP2C1-218ENST00000510168 DAXXQ9UER7 740 aaPredicted RBP24.44■■□□□ 1.5
ATP2C1-218ENST00000510168 RTL5Q5HYW3 569 aaPredicted RBP24.09■■□□□ 1.45
ATP2C1-218ENST00000510168 POLR3GLQ9BT43 218 aa23.96■■□□□ 1.43
ATP2C1-218ENST00000510168 DIEXFQ68CQ4 756 aaKnown RBP23.95■■□□□ 1.42
ATP2C1-218ENST00000510168 ITGAEP38570 1179 aa23.93■■□□□ 1.42
ATP2C1-218ENST00000510168 LOC105371045A0A1W2PR82 267 aa23.9■■□□□ 1.42
ATP2C1-218ENST00000510168 HNRNPUL2Q1KMD3 747 aaKnown RBP23.89■■□□□ 1.42
ATP2C1-218ENST00000510168 ZNF316A6NFI3 1004 aaPredicted RBP23.84■■□□□ 1.41
ATP2C1-218ENST00000510168 CHIC1Q5VXU3 224 aa23.8■■□□□ 1.4
ATP2C1-218ENST00000510168 CNGB1Q14028 1251 aaPredicted RBP23.76■■□□□ 1.39
ATP2C1-218ENST00000510168 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.74■■□□□ 1.39
ATP2C1-218ENST00000510168 GTF3C3Q9Y5Q9 886 aa23.73■■□□□ 1.39
ATP2C1-218ENST00000510168 CLSPNQ9HAW4 1339 aa23.73■■□□□ 1.39
ATP2C1-218ENST00000510168 BCANQ96GW7 911 aa23.56■■□□□ 1.36
ATP2C1-218ENST00000510168 SCAF1Q9H7N4 1312 aaKnown RBP23.51■■□□□ 1.35
ATP2C1-218ENST00000510168 CDK11AQ9UQ88 783 aaPredicted RBP23.51■■□□□ 1.35
ATP2C1-218ENST00000510168 MYT1LQ9UL68 1186 aa23.48■■□□□ 1.35
ATP2C1-218ENST00000510168 ACIN1Q9UKV3 1341 aaKnown RBP23.35■■□□□ 1.33
ATP2C1-218ENST00000510168 SLC4A1APQ9BWU0 796 aaKnown RBP23.34■■□□□ 1.33
ATP2C1-218ENST00000510168 ANP32CO43423 234 aa23.32■■□□□ 1.32
ATP2C1-218ENST00000510168 NEUROD1Q13562 356 aa23.22■■□□□ 1.31
ATP2C1-218ENST00000510168 FAM50AQ14320 339 aaKnown RBP23.21■■□□□ 1.31
ATP2C1-218ENST00000510168 ANP32AP39687 249 aaKnown RBP23.15■■□□□ 1.3
ATP2C1-218ENST00000510168 TRIM52Q96A61 297 aa23.14■■□□□ 1.3
ATP2C1-218ENST00000510168 ZBTB47Q9UFB7 747 aaPredicted RBP23.1■■□□□ 1.29
ATP2C1-218ENST00000510168 EIF5BO60841 1220 aaKnown RBP23.09■■□□□ 1.29
ATP2C1-218ENST00000510168 ZNF326Q5BKZ1 582 aaKnown RBP22.95■■□□□ 1.26
ATP2C1-218ENST00000510168 CANXP27824 592 aaKnown RBP22.93■■□□□ 1.26
ATP2C1-218ENST00000510168 NPM2Q86SE8 214 aaKnown RBP22.91■■□□□ 1.26
ATP2C1-218ENST00000510168 GLIPR1L2Q4G1C9 344 aa22.87■■□□□ 1.25
ATP2C1-218ENST00000510168 FKBP8Q14318 412 aa22.87■■□□□ 1.25
ATP2C1-218ENST00000510168 ANP32BQ92688 251 aaKnown RBP22.83■■□□□ 1.24
ATP2C1-218ENST00000510168 BCL11AQ9H165 835 aa22.78■■□□□ 1.24
ATP2C1-218ENST00000510168 DCAF1Q9Y4B6 1507 aa22.77■■□□□ 1.24
ATP2C1-218ENST00000510168 MYO15BQ96JP2 1530 aa22.74■■□□□ 1.23
ATP2C1-218ENST00000510168 NEFMP07197 916 aa22.68■■□□□ 1.22
ATP2C1-218ENST00000510168 HSP90AA1P07900 732 aaKnown RBP22.64■■□□□ 1.21
ATP2C1-218ENST00000510168 HNRNPUQ00839 825 aaKnown RBP eCLIP22.63■■□□□ 1.21
ATP2C1-218ENST00000510168 UPF2Q9HAU5 1272 aaKnown RBP22.62■■□□□ 1.21
ATP2C1-218ENST00000510168 NBR1Q14596 966 aa22.6■■□□□ 1.21
ATP2C1-218ENST00000510168 SLC24A1O60721 1099 aa22.55■■□□□ 1.2
ATP2C1-218ENST00000510168 CCDC136Q96JN2 1154 aa22.52■■□□□ 1.2
ATP2C1-218ENST00000510168 PRKCSHP14314 528 aaPredicted RBP22.51■■□□□ 1.19
ATP2C1-218ENST00000510168 DDX10Q13206 875 aaKnown RBP22.5■■□□□ 1.19
ATP2C1-218ENST00000510168 FAM9BQ8IZU0 186 aa22.48■■□□□ 1.19
ATP2C1-218ENST00000510168 CSRNP3Q8WYN3 585 aa22.46■■□□□ 1.19
ATP2C1-218ENST00000510168 TONSLQ96HA7 1378 aa22.43■■□□□ 1.18
ATP2C1-218ENST00000510168 ARXQ96QS3 562 aa22.36■■□□□ 1.17
ATP2C1-218ENST00000510168 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.36■■□□□ 1.17
ATP2C1-218ENST00000510168 SALL2Q9Y467 1007 aaPredicted RBP22.32■■□□□ 1.16
ATP2C1-218ENST00000510168 P3H3Q8IVL6 736 aa22.32■■□□□ 1.16
ATP2C1-218ENST00000510168 TMC1Q8TDI8 760 aa22.3■■□□□ 1.16
ATP2C1-218ENST00000510168 MIER1Q8N108 512 aa22.3■■□□□ 1.16
ATP2C1-218ENST00000510168 ANP32EQ9BTT0 268 aa22.27■■□□□ 1.16
ATP2C1-218ENST00000510168 CCDC180Q9P1Z9 1646 aa22.26■■□□□ 1.15
ATP2C1-218ENST00000510168 MRS2Q9HD23 443 aa22.24■■□□□ 1.15
ATP2C1-218ENST00000510168 IRX6P78412 446 aaPredicted RBP22.22■■□□□ 1.15
ATP2C1-218ENST00000510168 ZNF777Q9ULD5 760 aaPredicted RBP22.21■■□□□ 1.15
ATP2C1-218ENST00000510168 ARID3CA6NKF2 412 aa22.2■■□□□ 1.14
ATP2C1-218ENST00000510168 DDRGK1Q96HY6 314 aa22.16■■□□□ 1.14
ATP2C1-218ENST00000510168 FBLN2P98095 1184 aa22.16■■□□□ 1.14
ATP2C1-218ENST00000510168 TRIM44Q96DX7 344 aaPredicted RBP22.15■■□□□ 1.14
ATP2C1-218ENST00000510168 PABPN1Q86U42 306 aaKnown RBP eCLIP22.13■■□□□ 1.13
ATP2C1-218ENST00000510168 BECN1Q14457 450 aa22.11■■□□□ 1.13
ATP2C1-218ENST00000510168 WDR43Q15061 677 aaKnown RBP eCLIP22.1■■□□□ 1.13
ATP2C1-218ENST00000510168 ERICH6BQ5W0A0 696 aa22.07■■□□□ 1.12
ATP2C1-218ENST00000510168 TNNT2P45379 298 aaPredicted RBP22.06■■□□□ 1.12
ATP2C1-218ENST00000510168 PPM1GO15355 546 aaPredicted RBP22.02■■□□□ 1.12
ATP2C1-218ENST00000510168 GOLGA6L22H0YM25 854 aa22■■□□□ 1.11
ATP2C1-218ENST00000510168 CHGAP10645 457 aaKnown RBP21.98■■□□□ 1.11
ATP2C1-218ENST00000510168 NCLP19338 710 aaKnown RBP21.96■■□□□ 1.11
ATP2C1-218ENST00000510168 MYH16Q9H6N6 1097 aa21.96■■□□□ 1.11
ATP2C1-218ENST00000510168 HIRIP3Q9BW71 556 aaPredicted RBP21.95■■□□□ 1.1
ATP2C1-218ENST00000510168 EIF4G2P78344 907 aaKnown RBP eCLIP21.93■■□□□ 1.1
ATP2C1-218ENST00000510168 CHIC2Q9UKJ5 165 aa21.91■■□□□ 1.1
ATP2C1-218ENST00000510168 SUPT16HQ9Y5B9 1047 aaKnown RBP21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms