RNA–Protein interactions for RNA: ENST00000620465.4

MALAT1-216, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 2

Gene MALAT1, Length 333 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-216ENST00000620465 AEBP2Q6ZN18 517 aaPredicted RBP17.25■□□□□ 0.35
MALAT1-216ENST00000620465 CHIC1Q5VXU3 224 aa17.06■□□□□ 0.32
MALAT1-216ENST00000620465 PHF23Q9BUL5 403 aaPredicted RBP14.98□□□□□ -0.01
MALAT1-216ENST00000620465 SENP3Q9H4L4 574 aaPredicted RBP14.67□□□□□ -0.06
MALAT1-216ENST00000620465 PLPPR3Q6T4P5 718 aa13.95□□□□□ -0.18
MALAT1-216ENST00000620465 FOXD1Q16676 465 aa13.54□□□□□ -0.24
MALAT1-216ENST00000620465 ADRA2BP18089 450 aa13.16□□□□□ -0.3
MALAT1-216ENST00000620465 PPP6R1Q9UPN7 881 aa13.15□□□□□ -0.3
MALAT1-216ENST00000620465 PIAS4Q8N2W9 510 aaPredicted RBP12.85□□□□□ -0.35
MALAT1-216ENST00000620465 MSH5O43196 834 aa12.47□□□□□ -0.41
MALAT1-216ENST00000620465 PPP4R3CPQ6ZMV5 832 aa12.29□□□□□ -0.44
MALAT1-216ENST00000620465 KCNA4P22459 653 aa12.21□□□□□ -0.45
MALAT1-216ENST00000620465 SCAF1Q9H7N4 1312 aaKnown RBP12.1□□□□□ -0.47
MALAT1-216ENST00000620465 NCBP3Q53F19 620 aaKnown RBP12.06□□□□□ -0.48
MALAT1-216ENST00000620465 CNKSR2Q8WXI2 1034 aa11.92□□□□□ -0.5
MALAT1-216ENST00000620465 MAPK8IP2Q13387 824 aaPredicted RBP11.87□□□□□ -0.51
MALAT1-216ENST00000620465 NPM3O75607 178 aaKnown RBP11.85□□□□□ -0.51
MALAT1-216ENST00000620465 DMRT2Q9Y5R5 561 aa11.72□□□□□ -0.53
MALAT1-216ENST00000620465 SLC4A1APQ9BWU0 796 aaKnown RBP11.68□□□□□ -0.54
MALAT1-216ENST00000620465 RNF216Q9NWF9 866 aaPredicted RBP11.65□□□□□ -0.54
MALAT1-216ENST00000620465 EHMT2Q96KQ7 1210 aa11.55□□□□□ -0.56
MALAT1-216ENST00000620465 HOXD11P31277 338 aaPredicted RBP11.54□□□□□ -0.56
MALAT1-216ENST00000620465 DNAJC5BQ9UF47 199 aa11.5□□□□□ -0.57
MALAT1-216ENST00000620465 CSRNP3Q8WYN3 585 aa11.3□□□□□ -0.6
MALAT1-216ENST00000620465 ZBTB22O15209 634 aa11.23□□□□□ -0.61
MALAT1-216ENST00000620465 DCAF8L1A6NGE4 600 aa11.21□□□□□ -0.61
MALAT1-216ENST00000620465 FOXD4L1Q9NU39 408 aa11.21□□□□□ -0.61
MALAT1-216ENST00000620465 SLC4A2P04920 1241 aa11.13□□□□□ -0.63
MALAT1-216ENST00000620465 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.01□□□□□ -0.65
MALAT1-216ENST00000620465 POTEDQ86YR6 584 aa11□□□□□ -0.65
MALAT1-216ENST00000620465 MYCNP04198 464 aaPredicted RBP10.98□□□□□ -0.65
MALAT1-216ENST00000620465 U3KPZ7 1027 aaPredicted RBP10.84□□□□□ -0.67
MALAT1-216ENST00000620465 ATXN8OSP0DMR3 200 aa10.82□□□□□ -0.68
MALAT1-216ENST00000620465 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.81□□□□□ -0.68
MALAT1-216ENST00000620465 HNRNPUL2Q1KMD3 747 aaKnown RBP10.81□□□□□ -0.68
MALAT1-216ENST00000620465 SAMD1Q6SPF0 538 aaPredicted RBP10.77□□□□□ -0.69
MALAT1-216ENST00000620465 RNF39Q9H2S5 420 aa10.68□□□□□ -0.7
MALAT1-216ENST00000620465 APLP2Q06481 763 aa10.67□□□□□ -0.7
MALAT1-216ENST00000620465 ATF5Q9Y2D1 282 aaPredicted RBP10.61□□□□□ -0.71
MALAT1-216ENST00000620465 C1QBPQ07021 282 aaKnown RBP10.57□□□□□ -0.72
MALAT1-216ENST00000620465 SPINK5Q9NQ38 1064 aaPredicted RBP10.47□□□□□ -0.73
MALAT1-216ENST00000620465 ZNF219Q9P2Y4 722 aaPredicted RBP10.47□□□□□ -0.73
MALAT1-216ENST00000620465 CAPN15O75808 1086 aa10.44□□□□□ -0.74
MALAT1-216ENST00000620465 TRHP20396 242 aaPredicted RBP10.43□□□□□ -0.74
MALAT1-216ENST00000620465 POLA2Q14181 598 aa10.29□□□□□ -0.76
MALAT1-216ENST00000620465 CACNB1Q02641 598 aaPredicted RBP10.28□□□□□ -0.76
MALAT1-216ENST00000620465 ABCB7O75027 752 aa10.26□□□□□ -0.77
MALAT1-216ENST00000620465 FKBP8Q14318 412 aa10.23□□□□□ -0.77
MALAT1-216ENST00000620465 DSG3P32926 999 aa10.21□□□□□ -0.77
MALAT1-216ENST00000620465 FBLN2P98095 1184 aa10.21□□□□□ -0.77
MALAT1-216ENST00000620465 ZBTB12Q9Y330 459 aaPredicted RBP10.21□□□□□ -0.77
MALAT1-216ENST00000620465 MKRN4PQ13434 485 aaPredicted RBP10.17□□□□□ -0.78
MALAT1-216ENST00000620465 SPDYE4A6NLX3 237 aa10.06□□□□□ -0.8
MALAT1-216ENST00000620465 OSCARQ8IYS5 282 aa9.96□□□□□ -0.82
MALAT1-216ENST00000620465 PROM2Q8N271 834 aa9.92□□□□□ -0.82
MALAT1-216ENST00000620465 SPDYE2BA6NHP3 402 aa9.91□□□□□ -0.82
MALAT1-216ENST00000620465 SPDYE6P0CI01 402 aa9.91□□□□□ -0.82
MALAT1-216ENST00000620465 SPDYE2Q495Y8 402 aa9.91□□□□□ -0.82
MALAT1-216ENST00000620465 ZNF692Q9BU19 519 aaPredicted RBP9.88□□□□□ -0.83
MALAT1-216ENST00000620465 FBXO3Q9UK99 471 aa9.85□□□□□ -0.83
MALAT1-216ENST00000620465 SSUH2Q9Y2M2 353 aa9.85□□□□□ -0.83
MALAT1-216ENST00000620465 RBM42Q9BTD8 480 aaKnown RBP9.78□□□□□ -0.84
MALAT1-216ENST00000620465 PABPN1Q86U42 306 aaKnown RBP eCLIP9.76□□□□□ -0.85
MALAT1-216ENST00000620465 VASPP50552 380 aaPredicted RBP9.7□□□□□ -0.86
MALAT1-216ENST00000620465 AMER1Q5JTC6 1135 aaPredicted RBP9.68□□□□□ -0.86
MALAT1-216ENST00000620465 AKT1S1Q96B36 256 aa9.67□□□□□ -0.86
MALAT1-216ENST00000620465 STAG3Q9UJ98 1225 aa9.66□□□□□ -0.86
MALAT1-216ENST00000620465 RTN4Q9NQC3 1192 aaKnown RBP9.61□□□□□ -0.87
MALAT1-216ENST00000620465 SPDYE1Q8NFV5 336 aaPredicted RBP9.58□□□□□ -0.88
MALAT1-216ENST00000620465 REM2Q8IYK8 340 aaPredicted RBP9.56□□□□□ -0.88
MALAT1-216ENST00000620465 IFNLR1Q8IU57 520 aaPredicted RBP9.55□□□□□ -0.88
MALAT1-216ENST00000620465 PLCD3Q8N3E9 789 aa9.54□□□□□ -0.88
MALAT1-216ENST00000620465 CLEC11AQ9Y240 323 aa9.51□□□□□ -0.89
MALAT1-216ENST00000620465 PLEKHG5O94827 1062 aa9.5□□□□□ -0.89
MALAT1-216ENST00000620465 MIER1Q8N108 512 aa9.5□□□□□ -0.89
MALAT1-216ENST00000620465 KLHL34Q8N239 644 aa9.48□□□□□ -0.89
MALAT1-216ENST00000620465 PITPNM1O00562 1244 aa9.46□□□□□ -0.9
MALAT1-216ENST00000620465 PRR29P0C7W0 189 aa9.45□□□□□ -0.9
MALAT1-216ENST00000620465 ZBTB47Q9UFB7 747 aaPredicted RBP9.44□□□□□ -0.9
MALAT1-216ENST00000620465 SPOCK2Q92563 424 aa9.43□□□□□ -0.9
MALAT1-216ENST00000620465 CREBZFQ9NS37 354 aa9.36□□□□□ -0.91
MALAT1-216ENST00000620465 PKD2Q13563 968 aa9.3□□□□□ -0.92
MALAT1-216ENST00000620465 MNX1P50219 401 aaPredicted RBP9.27□□□□□ -0.93
MALAT1-216ENST00000620465 CHRDL2Q6WN34 429 aa9.27□□□□□ -0.93
MALAT1-216ENST00000620465 CIZ1Q9ULV3 898 aaPredicted RBP9.25□□□□□ -0.93
MALAT1-216ENST00000620465 NPM1P06748 294 aaKnown RBP eCLIP9.24□□□□□ -0.93
MALAT1-216ENST00000620465 NUBP1P53384 320 aa9.24□□□□□ -0.93
MALAT1-216ENST00000620465 CHADLQ6NUI6 762 aa9.24□□□□□ -0.93
MALAT1-216ENST00000620465 ECM2O94769 699 aaPredicted RBP9.23□□□□□ -0.93
MALAT1-216ENST00000620465 FXR2P51116 673 aaKnown RBP eCLIP9.23□□□□□ -0.93
MALAT1-216ENST00000620465 PRKAR2AP13861 404 aaKnown RBP9.22□□□□□ -0.93
MALAT1-216ENST00000620465 GSE1Q14687 1217 aa9.22□□□□□ -0.93
MALAT1-216ENST00000620465 FAM212AQ96EL1 285 aa9.21□□□□□ -0.94
MALAT1-216ENST00000620465 TRIM41Q8WV44 630 aa9.2□□□□□ -0.94
MALAT1-216ENST00000620465 DCAF8L2P0C7V8 631 aa9.19□□□□□ -0.94
MALAT1-216ENST00000620465 FARP1Q9Y4F1 1045 aaPredicted RBP9.19□□□□□ -0.94
MALAT1-216ENST00000620465 PIP4P2Q8N4L2 257 aa9.18□□□□□ -0.94
MALAT1-216ENST00000620465 DCAF8Q5TAQ9 597 aa9.17□□□□□ -0.94
MALAT1-216ENST00000620465 RASEFQ8IZ41 740 aa9.17□□□□□ -0.94
MALAT1-216ENST00000620465 RGL2O15211 777 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms