RNA–Protein interactions for RNA: ENST00000534336.1

MALAT1-202, metastasis associated lung adenocarcinoma transcript 1, humanhuman

BASIC

Gene MALAT1, Length 8,708 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-202ENST00000534336 PELP1Q8IZL8 1130 aaKnown RBP15.63■□□□□ 0.09
MALAT1-202ENST00000534336 MYT1Q01538 1121 aa15.42■□□□□ 0.06
MALAT1-202ENST00000534336 ERICH6Q7L0X2 663 aa14.88□□□□□ -0.03
MALAT1-202ENST00000534336 CCER1Q8TC90 406 aaPredicted RBP14.86□□□□□ -0.03
MALAT1-202ENST00000534336 TTBK1Q5TCY1 1321 aaPredicted RBP14.68□□□□□ -0.06
MALAT1-202ENST00000534336 YTHDC1Q96MU7 727 aaKnown RBP14.58□□□□□ -0.08
MALAT1-202ENST00000534336 DCAF8L2P0C7V8 631 aa14.46□□□□□ -0.09
MALAT1-202ENST00000534336 CENPBP07199 599 aaPredicted RBP14.27□□□□□ -0.13
MALAT1-202ENST00000534336 FAM9AQ8IZU1 332 aaPredicted RBP14.15□□□□□ -0.14
MALAT1-202ENST00000534336 APLP2Q06481 763 aa14.14□□□□□ -0.15
MALAT1-202ENST00000534336 DAXXQ9UER7 740 aaPredicted RBP14.13□□□□□ -0.15
MALAT1-202ENST00000534336 NEFLP07196 543 aa14.12□□□□□ -0.15
MALAT1-202ENST00000534336 ZEB1P37275 1124 aaPredicted RBP13.81□□□□□ -0.2
MALAT1-202ENST00000534336 SUPT5HO00267 1087 aaKnown RBP13.74□□□□□ -0.21
MALAT1-202ENST00000534336 RTL5Q5HYW3 569 aaPredicted RBP13.7□□□□□ -0.22
MALAT1-202ENST00000534336 ZNF316A6NFI3 1004 aaPredicted RBP13.7□□□□□ -0.22
MALAT1-202ENST00000534336 EHMT2Q96KQ7 1210 aa13.68□□□□□ -0.22
MALAT1-202ENST00000534336 RANGAP1P46060 587 aaPredicted RBP13.67□□□□□ -0.22
MALAT1-202ENST00000534336 GLIPR1L2Q4G1C9 344 aa13.65□□□□□ -0.22
MALAT1-202ENST00000534336 PCGF6Q9BYE7 350 aa13.55□□□□□ -0.24
MALAT1-202ENST00000534336 CLSPNQ9HAW4 1339 aa13.4□□□□□ -0.27
MALAT1-202ENST00000534336 ATP1B4Q9UN42 357 aaPredicted RBP13.28□□□□□ -0.28
MALAT1-202ENST00000534336 ANP32BQ92688 251 aaKnown RBP13.21□□□□□ -0.29
MALAT1-202ENST00000534336 SHROOM4Q9ULL8 1493 aa13.19□□□□□ -0.3
MALAT1-202ENST00000534336 ZBTB47Q9UFB7 747 aaPredicted RBP13.19□□□□□ -0.3
MALAT1-202ENST00000534336 EIF5BO60841 1220 aaKnown RBP13.08□□□□□ -0.31
MALAT1-202ENST00000534336 POLR3GLQ9BT43 218 aa13.08□□□□□ -0.32
MALAT1-202ENST00000534336 SLC4A1APQ9BWU0 796 aaKnown RBP13.06□□□□□ -0.32
MALAT1-202ENST00000534336 CDK11AQ9UQ88 783 aaPredicted RBP13□□□□□ -0.33
MALAT1-202ENST00000534336 MYT1LQ9UL68 1186 aa12.98□□□□□ -0.33
MALAT1-202ENST00000534336 UBTFP17480 764 aaKnown RBP12.96□□□□□ -0.34
MALAT1-202ENST00000534336 TNNT2P45379 298 aaPredicted RBP12.95□□□□□ -0.34
MALAT1-202ENST00000534336 CDK11BP21127 795 aaKnown RBP12.93□□□□□ -0.34
MALAT1-202ENST00000534336 NEFMP07197 916 aa12.93□□□□□ -0.34
MALAT1-202ENST00000534336 ANP32AP39687 249 aaKnown RBP12.93□□□□□ -0.34
MALAT1-202ENST00000534336 HSP90AA1P07900 732 aaKnown RBP12.85□□□□□ -0.35
MALAT1-202ENST00000534336 TRIM41Q8WV44 630 aa12.84□□□□□ -0.35
MALAT1-202ENST00000534336 CANXP27824 592 aaKnown RBP12.83□□□□□ -0.36
MALAT1-202ENST00000534336 CNGB1Q14028 1251 aaPredicted RBP12.8□□□□□ -0.36
MALAT1-202ENST00000534336 TRIM26Q12899 539 aaPredicted RBP12.77□□□□□ -0.36
MALAT1-202ENST00000534336 SLC24A1O60721 1099 aa12.77□□□□□ -0.36
MALAT1-202ENST00000534336 UPF2Q9HAU5 1272 aaKnown RBP12.75□□□□□ -0.37
MALAT1-202ENST00000534336 CHIC1Q5VXU3 224 aa12.74□□□□□ -0.37
MALAT1-202ENST00000534336 HRCP23327 699 aa12.74□□□□□ -0.37
MALAT1-202ENST00000534336 NCLP19338 710 aaKnown RBP12.73□□□□□ -0.37
MALAT1-202ENST00000534336 TRIM44Q96DX7 344 aaPredicted RBP12.7□□□□□ -0.38
MALAT1-202ENST00000534336 DIEXFQ68CQ4 756 aaKnown RBP12.68□□□□□ -0.38
MALAT1-202ENST00000534336 ZNF326Q5BKZ1 582 aaKnown RBP12.67□□□□□ -0.38
MALAT1-202ENST00000534336 BCL11AQ9H165 835 aa12.66□□□□□ -0.38
MALAT1-202ENST00000534336 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.65□□□□□ -0.38
MALAT1-202ENST00000534336 HNRNPUL2Q1KMD3 747 aaKnown RBP12.65□□□□□ -0.38
MALAT1-202ENST00000534336 ITGAEP38570 1179 aa12.62□□□□□ -0.39
MALAT1-202ENST00000534336 ANP32CO43423 234 aa12.61□□□□□ -0.39
MALAT1-202ENST00000534336 NISCHQ9Y2I1 1504 aa12.6□□□□□ -0.39
MALAT1-202ENST00000534336 NPM2Q86SE8 214 aaKnown RBP12.56□□□□□ -0.4
MALAT1-202ENST00000534336 BCANQ96GW7 911 aa12.56□□□□□ -0.4
MALAT1-202ENST00000534336 ANP32EQ9BTT0 268 aa12.53□□□□□ -0.4
MALAT1-202ENST00000534336 GTF3C3Q9Y5Q9 886 aa12.5□□□□□ -0.41
MALAT1-202ENST00000534336 CALRP27797 417 aaKnown RBP12.49□□□□□ -0.41
MALAT1-202ENST00000534336 PPARGC1BQ86YN6 1023 aaKnown RBP12.48□□□□□ -0.41
MALAT1-202ENST00000534336 ZRSR1Q15695 479 aaKnown RBP12.45□□□□□ -0.42
MALAT1-202ENST00000534336 DNTTIP2Q5QJE6 756 aaKnown RBP12.44□□□□□ -0.42
MALAT1-202ENST00000534336 PTMSP20962 102 aa12.43□□□□□ -0.42
MALAT1-202ENST00000534336 ARXQ96QS3 562 aa12.43□□□□□ -0.42
MALAT1-202ENST00000534336 NBR1Q14596 966 aa12.42□□□□□ -0.42
MALAT1-202ENST00000534336 GOLGA6L6A8MZA4 724 aa12.4□□□□□ -0.42
MALAT1-202ENST00000534336 GOLGA6L22H0YM25 854 aa12.39□□□□□ -0.43
MALAT1-202ENST00000534336 PTMAP06454 111 aaKnown RBP12.36□□□□□ -0.43
MALAT1-202ENST00000534336 BECN1Q14457 450 aa12.36□□□□□ -0.43
MALAT1-202ENST00000534336 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.35□□□□□ -0.43
MALAT1-202ENST00000534336 L1TD1Q5T7N2 865 aaKnown RBP12.34□□□□□ -0.43
MALAT1-202ENST00000534336 CHAF1AQ13111 956 aaPredicted RBP12.33□□□□□ -0.44
MALAT1-202ENST00000534336 TRIM52Q96A61 297 aa12.33□□□□□ -0.44
MALAT1-202ENST00000534336 MYH16Q9H6N6 1097 aa12.32□□□□□ -0.44
MALAT1-202ENST00000534336 ERICH6BQ5W0A0 696 aa12.32□□□□□ -0.44
MALAT1-202ENST00000534336 DDRGK1Q96HY6 314 aa12.32□□□□□ -0.44
MALAT1-202ENST00000534336 NRDCO43847 1150 aa12.31□□□□□ -0.44
MALAT1-202ENST00000534336 FAM50AQ14320 339 aaKnown RBP12.29□□□□□ -0.44
MALAT1-202ENST00000534336 NAP1L5Q96NT1 182 aaPredicted RBP12.29□□□□□ -0.44
MALAT1-202ENST00000534336 NEUROD1Q13562 356 aa12.27□□□□□ -0.45
MALAT1-202ENST00000534336 AMER1Q5JTC6 1135 aaPredicted RBP12.23□□□□□ -0.45
MALAT1-202ENST00000534336 CASC1Q6TDU7 716 aa12.23□□□□□ -0.45
MALAT1-202ENST00000534336 TNNT3P45378 269 aaPredicted RBP12.22□□□□□ -0.45
MALAT1-202ENST00000534336 TULP1O00294 542 aaPredicted RBP12.19□□□□□ -0.46
MALAT1-202ENST00000534336 USP35Q9P2H5 1018 aa12.19□□□□□ -0.46
MALAT1-202ENST00000534336 CCDC136Q96JN2 1154 aa12.18□□□□□ -0.46
MALAT1-202ENST00000534336 KIAA2012Q0VF49 1180 aa12.18□□□□□ -0.46
MALAT1-202ENST00000534336 NOC3LQ8WTT2 800 aaKnown RBP12.17□□□□□ -0.46
MALAT1-202ENST00000534336 FKBP8Q14318 412 aa12.15□□□□□ -0.46
MALAT1-202ENST00000534336 SETQ01105 290 aaPredicted RBP12.15□□□□□ -0.46
MALAT1-202ENST00000534336 ACIN1Q9UKV3 1341 aaKnown RBP12.14□□□□□ -0.47
MALAT1-202ENST00000534336 MSNP26038 577 aaKnown RBP12.13□□□□□ -0.47
MALAT1-202ENST00000534336 NCBP3Q53F19 620 aaKnown RBP12.12□□□□□ -0.47
MALAT1-202ENST00000534336 GOLGA6L1Q8N7Z2 621 aa12.11□□□□□ -0.47
MALAT1-202ENST00000534336 PRM3Q9NNZ6 103 aa12.08□□□□□ -0.48
MALAT1-202ENST00000534336 KAT6BQ8WYB5 2073 aa12.06□□□□□ -0.48
MALAT1-202ENST00000534336 A0A0U1RQG5 324 aaPredicted RBP12.05□□□□□ -0.48
MALAT1-202ENST00000534336 CLSTN1O94985 981 aa12.05□□□□□ -0.48
MALAT1-202ENST00000534336 PNNQ9H307 717 aaKnown RBP12.04□□□□□ -0.48
MALAT1-202ENST00000534336 APPP05067 770 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms