RNA–Protein interactions for RNA: ENST00000505330.5

ATP2C1-210, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ATP2C1, Length 4,888 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-210ENST00000505330 DCAF8L2P0C7V8 631 aa9.65□□□□□ -0.86
ATP2C1-210ENST00000505330 NISCHQ9Y2I1 1504 aa9.51□□□□□ -0.89
ATP2C1-210ENST00000505330 SUPT5HO00267 1087 aaKnown RBP9.22□□□□□ -0.93
ATP2C1-210ENST00000505330 SHROOM4Q9ULL8 1493 aa9.16□□□□□ -0.94
ATP2C1-210ENST00000505330 EHMT2Q96KQ7 1210 aa8.91□□□□□ -0.98
ATP2C1-210ENST00000505330 FAM9AQ8IZU1 332 aaPredicted RBP8.69□□□□□ -1.02
ATP2C1-210ENST00000505330 TTBK1Q5TCY1 1321 aaPredicted RBP8.58□□□□□ -1.04
ATP2C1-210ENST00000505330 PCGF6Q9BYE7 350 aa8.56□□□□□ -1.04
ATP2C1-210ENST00000505330 TRIM41Q8WV44 630 aa8.49□□□□□ -1.05
ATP2C1-210ENST00000505330 RANGAP1P46060 587 aaPredicted RBP8.48□□□□□ -1.05
ATP2C1-210ENST00000505330 APLP2Q06481 763 aa8.48□□□□□ -1.05
ATP2C1-210ENST00000505330 PPARGC1BQ86YN6 1023 aaKnown RBP8.35□□□□□ -1.07
ATP2C1-210ENST00000505330 UBTFP17480 764 aaKnown RBP8.35□□□□□ -1.07
ATP2C1-210ENST00000505330 ATP1B4Q9UN42 357 aaPredicted RBP8.31□□□□□ -1.08
ATP2C1-210ENST00000505330 CCER1Q8TC90 406 aaPredicted RBP8.3□□□□□ -1.08
ATP2C1-210ENST00000505330 LOC105371045A0A1W2PR82 267 aa8.29□□□□□ -1.08
ATP2C1-210ENST00000505330 CHIC1Q5VXU3 224 aa8.28□□□□□ -1.08
ATP2C1-210ENST00000505330 ZEB1P37275 1124 aaPredicted RBP8.19□□□□□ -1.1
ATP2C1-210ENST00000505330 ABCC9O60706 1549 aa8.18□□□□□ -1.1
ATP2C1-210ENST00000505330 TRIM26Q12899 539 aaPredicted RBP8.16□□□□□ -1.1
ATP2C1-210ENST00000505330 PELP1Q8IZL8 1130 aaKnown RBP8.15□□□□□ -1.11
ATP2C1-210ENST00000505330 PABPN1Q86U42 306 aaKnown RBP eCLIP8.14□□□□□ -1.11
ATP2C1-210ENST00000505330 YTHDC1Q96MU7 727 aaKnown RBP8.11□□□□□ -1.11
ATP2C1-210ENST00000505330 ITGAEP38570 1179 aa8.11□□□□□ -1.11
ATP2C1-210ENST00000505330 HRCP23327 699 aa8.1□□□□□ -1.11
ATP2C1-210ENST00000505330 CENPBP07199 599 aaPredicted RBP8.1□□□□□ -1.11
ATP2C1-210ENST00000505330 HNRNPUL2Q1KMD3 747 aaKnown RBP8.07□□□□□ -1.12
ATP2C1-210ENST00000505330 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.01□□□□□ -1.13
ATP2C1-210ENST00000505330 CNGB1Q14028 1251 aaPredicted RBP7.91□□□□□ -1.14
ATP2C1-210ENST00000505330 POLR3GLQ9BT43 218 aa7.91□□□□□ -1.14
ATP2C1-210ENST00000505330 NEFLP07196 543 aa7.9□□□□□ -1.15
ATP2C1-210ENST00000505330 ZCCHC6Q5VYS8 1495 aaKnown RBP7.89□□□□□ -1.15
ATP2C1-210ENST00000505330 MYT1LQ9UL68 1186 aa7.89□□□□□ -1.15
ATP2C1-210ENST00000505330 FAM50AQ14320 339 aaKnown RBP7.87□□□□□ -1.15
ATP2C1-210ENST00000505330 SCRIBQ14160 1630 aa7.86□□□□□ -1.15
ATP2C1-210ENST00000505330 ERICH6Q7L0X2 663 aa7.86□□□□□ -1.15
ATP2C1-210ENST00000505330 DIEXFQ68CQ4 756 aaKnown RBP7.84□□□□□ -1.15
ATP2C1-210ENST00000505330 CSRNP3Q8WYN3 585 aa7.82□□□□□ -1.16
ATP2C1-210ENST00000505330 P3H3Q8IVL6 736 aa7.81□□□□□ -1.16
ATP2C1-210ENST00000505330 NEUROD1Q13562 356 aa7.81□□□□□ -1.16
ATP2C1-210ENST00000505330 ARID3CA6NKF2 412 aa7.79□□□□□ -1.16
ATP2C1-210ENST00000505330 FBLN2P98095 1184 aa7.78□□□□□ -1.16
ATP2C1-210ENST00000505330 TRIM52Q96A61 297 aa7.78□□□□□ -1.16
ATP2C1-210ENST00000505330 CCDC180Q9P1Z9 1646 aa7.72□□□□□ -1.17
ATP2C1-210ENST00000505330 ZNF326Q5BKZ1 582 aaKnown RBP7.72□□□□□ -1.17
ATP2C1-210ENST00000505330 SLC4A1APQ9BWU0 796 aaKnown RBP7.69□□□□□ -1.18
ATP2C1-210ENST00000505330 MYO15BQ96JP2 1530 aa7.69□□□□□ -1.18
ATP2C1-210ENST00000505330 ZNF316A6NFI3 1004 aaPredicted RBP7.67□□□□□ -1.18
ATP2C1-210ENST00000505330 GTF3C3Q9Y5Q9 886 aa7.66□□□□□ -1.18
ATP2C1-210ENST00000505330 RSF1Q96T23 1441 aaPredicted RBP7.66□□□□□ -1.18
ATP2C1-210ENST00000505330 BCANQ96GW7 911 aa7.66□□□□□ -1.18
ATP2C1-210ENST00000505330 ZNF777Q9ULD5 760 aaPredicted RBP7.64□□□□□ -1.19
ATP2C1-210ENST00000505330 DCAF1Q9Y4B6 1507 aa7.64□□□□□ -1.19
ATP2C1-210ENST00000505330 ANP32CO43423 234 aa7.61□□□□□ -1.19
ATP2C1-210ENST00000505330 DAXXQ9UER7 740 aaPredicted RBP7.57□□□□□ -1.2
ATP2C1-210ENST00000505330 CHIC2Q9UKJ5 165 aa7.57□□□□□ -1.2
ATP2C1-210ENST00000505330 RB1CC1Q8TDY2 1594 aa7.56□□□□□ -1.2
ATP2C1-210ENST00000505330 CECR2Q9BXF3 1484 aa7.56□□□□□ -1.2
ATP2C1-210ENST00000505330 ACIN1Q9UKV3 1341 aaKnown RBP7.56□□□□□ -1.2
ATP2C1-210ENST00000505330 CLIP1P30622 1438 aa7.55□□□□□ -1.2
ATP2C1-210ENST00000505330 CDK11AQ9UQ88 783 aaPredicted RBP7.54□□□□□ -1.2
ATP2C1-210ENST00000505330 DDX10Q13206 875 aaKnown RBP7.53□□□□□ -1.2
ATP2C1-210ENST00000505330 CLSPNQ9HAW4 1339 aa7.53□□□□□ -1.2
ATP2C1-210ENST00000505330 CEP162Q5TB80 1403 aa7.52□□□□□ -1.21
ATP2C1-210ENST00000505330 TONSLQ96HA7 1378 aa7.52□□□□□ -1.21
ATP2C1-210ENST00000505330 HIRIP3Q9BW71 556 aaPredicted RBP7.51□□□□□ -1.21
ATP2C1-210ENST00000505330 WRNQ14191 1432 aaPredicted RBP eCLIP7.51□□□□□ -1.21
ATP2C1-210ENST00000505330 NACADO15069 1562 aa7.51□□□□□ -1.21
ATP2C1-210ENST00000505330 MTUS2Q5JR59 1369 aa7.49□□□□□ -1.21
ATP2C1-210ENST00000505330 BAZ1BQ9UIG0 1483 aaKnown RBP7.49□□□□□ -1.21
ATP2C1-210ENST00000505330 MYT1Q01538 1121 aa7.47□□□□□ -1.21
ATP2C1-210ENST00000505330 GOLGA3Q08378 1498 aa7.47□□□□□ -1.21
ATP2C1-210ENST00000505330 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.47□□□□□ -1.21
ATP2C1-210ENST00000505330 CHMP7Q8WUX9 453 aaPredicted RBP7.46□□□□□ -1.21
ATP2C1-210ENST00000505330 MIER1Q8N108 512 aa7.46□□□□□ -1.21
ATP2C1-210ENST00000505330 RRP7BPQ9NSQ0 103 aa7.46□□□□□ -1.21
ATP2C1-210ENST00000505330 CHGAP10645 457 aaKnown RBP7.46□□□□□ -1.22
ATP2C1-210ENST00000505330 BCL11AQ9H165 835 aa7.46□□□□□ -1.22
ATP2C1-210ENST00000505330 HNRNPUQ00839 825 aaKnown RBP eCLIP7.45□□□□□ -1.22
ATP2C1-210ENST00000505330 FAM9BQ8IZU0 186 aa7.45□□□□□ -1.22
ATP2C1-210ENST00000505330 EEA1Q15075 1411 aa7.44□□□□□ -1.22
ATP2C1-210ENST00000505330 SOGA1O94964 1423 aa7.44□□□□□ -1.22
ATP2C1-210ENST00000505330 SALL2Q9Y467 1007 aaPredicted RBP7.44□□□□□ -1.22
ATP2C1-210ENST00000505330 FKBP8Q14318 412 aa7.44□□□□□ -1.22
ATP2C1-210ENST00000505330 KDM2AQ9Y2K7 1162 aa7.44□□□□□ -1.22
ATP2C1-210ENST00000505330 BAZ1AQ9NRL2 1556 aaPredicted RBP7.44□□□□□ -1.22
ATP2C1-210ENST00000505330 TNIKQ9UKE5 1360 aa7.43□□□□□ -1.22
ATP2C1-210ENST00000505330 MROH2BQ7Z745 1585 aa7.43□□□□□ -1.22
ATP2C1-210ENST00000505330 RTL5Q5HYW3 569 aaPredicted RBP7.42□□□□□ -1.22
ATP2C1-210ENST00000505330 TSPY4P0CV99 314 aa7.41□□□□□ -1.22
ATP2C1-210ENST00000505330 TSPY10P0CW01 314 aa7.41□□□□□ -1.22
ATP2C1-210ENST00000505330 PLPPR3Q6T4P5 718 aa7.41□□□□□ -1.22
ATP2C1-210ENST00000505330 KIF27Q86VH2 1401 aa7.41□□□□□ -1.22
ATP2C1-210ENST00000505330 CANXP27824 592 aaKnown RBP7.4□□□□□ -1.22
ATP2C1-210ENST00000505330 SLC24A1O60721 1099 aa7.4□□□□□ -1.22
ATP2C1-210ENST00000505330 CEP164Q9UPV0 1460 aa7.4□□□□□ -1.22
ATP2C1-210ENST00000505330 KCNH8Q96L42 1107 aa7.4□□□□□ -1.22
ATP2C1-210ENST00000505330 SENP3Q9H4L4 574 aaPredicted RBP7.4□□□□□ -1.22
ATP2C1-210ENST00000505330 SCAF1Q9H7N4 1312 aaKnown RBP7.39□□□□□ -1.23
ATP2C1-210ENST00000505330 NPM1P06748 294 aaKnown RBP eCLIP7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms