RNA–Protein interactions for RNA: ENST00000612781.1

MALAT1-206, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 3 BASIC

Gene MALAT1, Length 234 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-206ENST00000612781 AEBP2Q6ZN18 517 aaPredicted RBP18.46■□□□□ 0.55
MALAT1-206ENST00000612781 CHIC1Q5VXU3 224 aa18.1■□□□□ 0.49
MALAT1-206ENST00000612781 PHF23Q9BUL5 403 aaPredicted RBP15.99■□□□□ 0.15
MALAT1-206ENST00000612781 SENP3Q9H4L4 574 aaPredicted RBP15.53■□□□□ 0.08
MALAT1-206ENST00000612781 PLPPR3Q6T4P5 718 aa14.71□□□□□ -0.05
MALAT1-206ENST00000612781 FOXD1Q16676 465 aa14.47□□□□□ -0.09
MALAT1-206ENST00000612781 PPP6R1Q9UPN7 881 aa14.06□□□□□ -0.16
MALAT1-206ENST00000612781 ADRA2BP18089 450 aa14.02□□□□□ -0.17
MALAT1-206ENST00000612781 PIAS4Q8N2W9 510 aaPredicted RBP13.63□□□□□ -0.23
MALAT1-206ENST00000612781 MSH5O43196 834 aa13.21□□□□□ -0.29
MALAT1-206ENST00000612781 PPP4R3CPQ6ZMV5 832 aa13.01□□□□□ -0.33
MALAT1-206ENST00000612781 KCNA4P22459 653 aa12.89□□□□□ -0.35
MALAT1-206ENST00000612781 SCAF1Q9H7N4 1312 aaKnown RBP12.71□□□□□ -0.37
MALAT1-206ENST00000612781 MAPK8IP2Q13387 824 aaPredicted RBP12.7□□□□□ -0.38
MALAT1-206ENST00000612781 NCBP3Q53F19 620 aaKnown RBP12.62□□□□□ -0.39
MALAT1-206ENST00000612781 CNKSR2Q8WXI2 1034 aa12.58□□□□□ -0.4
MALAT1-206ENST00000612781 NPM3O75607 178 aaKnown RBP12.54□□□□□ -0.4
MALAT1-206ENST00000612781 DMRT2Q9Y5R5 561 aa12.46□□□□□ -0.41
MALAT1-206ENST00000612781 RNF216Q9NWF9 866 aaPredicted RBP12.32□□□□□ -0.44
MALAT1-206ENST00000612781 HOXD11P31277 338 aaPredicted RBP12.27□□□□□ -0.45
MALAT1-206ENST00000612781 SLC4A1APQ9BWU0 796 aaKnown RBP12.24□□□□□ -0.45
MALAT1-206ENST00000612781 DNAJC5BQ9UF47 199 aa12.16□□□□□ -0.46
MALAT1-206ENST00000612781 EHMT2Q96KQ7 1210 aa12.06□□□□□ -0.48
MALAT1-206ENST00000612781 ZBTB22O15209 634 aa11.91□□□□□ -0.5
MALAT1-206ENST00000612781 CSRNP3Q8WYN3 585 aa11.91□□□□□ -0.5
MALAT1-206ENST00000612781 POTEDQ86YR6 584 aa11.87□□□□□ -0.51
MALAT1-206ENST00000612781 DCAF8L1A6NGE4 600 aa11.85□□□□□ -0.51
MALAT1-206ENST00000612781 SLC4A2P04920 1241 aa11.84□□□□□ -0.51
MALAT1-206ENST00000612781 FOXD4L1Q9NU39 408 aa11.78□□□□□ -0.52
MALAT1-206ENST00000612781 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.62□□□□□ -0.55
MALAT1-206ENST00000612781 MYCNP04198 464 aaPredicted RBP11.54□□□□□ -0.56
MALAT1-206ENST00000612781 U3KPZ7 1027 aaPredicted RBP11.53□□□□□ -0.56
MALAT1-206ENST00000612781 RNF39Q9H2S5 420 aa11.39□□□□□ -0.59
MALAT1-206ENST00000612781 ATXN8OSP0DMR3 200 aa11.33□□□□□ -0.6
MALAT1-206ENST00000612781 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.31□□□□□ -0.6
MALAT1-206ENST00000612781 HNRNPUL2Q1KMD3 747 aaKnown RBP11.31□□□□□ -0.6
MALAT1-206ENST00000612781 ATF5Q9Y2D1 282 aaPredicted RBP11.31□□□□□ -0.6
MALAT1-206ENST00000612781 SAMD1Q6SPF0 538 aaPredicted RBP11.3□□□□□ -0.6
MALAT1-206ENST00000612781 C1QBPQ07021 282 aaKnown RBP11.21□□□□□ -0.61
MALAT1-206ENST00000612781 SPINK5Q9NQ38 1064 aaPredicted RBP11.17□□□□□ -0.62
MALAT1-206ENST00000612781 APLP2Q06481 763 aa11.13□□□□□ -0.63
MALAT1-206ENST00000612781 ZNF219Q9P2Y4 722 aaPredicted RBP11.05□□□□□ -0.64
MALAT1-206ENST00000612781 CAPN15O75808 1086 aa11.04□□□□□ -0.64
MALAT1-206ENST00000612781 TRHP20396 242 aaPredicted RBP11.04□□□□□ -0.64
MALAT1-206ENST00000612781 CACNB1Q02641 598 aaPredicted RBP10.94□□□□□ -0.66
MALAT1-206ENST00000612781 POLA2Q14181 598 aa10.91□□□□□ -0.66
MALAT1-206ENST00000612781 ABCB7O75027 752 aa10.89□□□□□ -0.67
MALAT1-206ENST00000612781 DSG3P32926 999 aa10.88□□□□□ -0.67
MALAT1-206ENST00000612781 MKRN4PQ13434 485 aaPredicted RBP10.82□□□□□ -0.68
MALAT1-206ENST00000612781 FKBP8Q14318 412 aa10.71□□□□□ -0.69
MALAT1-206ENST00000612781 FBLN2P98095 1184 aa10.69□□□□□ -0.7
MALAT1-206ENST00000612781 ZBTB12Q9Y330 459 aaPredicted RBP10.67□□□□□ -0.7
MALAT1-206ENST00000612781 SPDYE4A6NLX3 237 aa10.56□□□□□ -0.72
MALAT1-206ENST00000612781 OSCARQ8IYS5 282 aa10.54□□□□□ -0.72
MALAT1-206ENST00000612781 PROM2Q8N271 834 aa10.47□□□□□ -0.73
MALAT1-206ENST00000612781 SPDYE2BA6NHP3 402 aa10.43□□□□□ -0.74
MALAT1-206ENST00000612781 SPDYE6P0CI01 402 aa10.43□□□□□ -0.74
MALAT1-206ENST00000612781 SPDYE2Q495Y8 402 aa10.43□□□□□ -0.74
MALAT1-206ENST00000612781 ZNF692Q9BU19 519 aaPredicted RBP10.41□□□□□ -0.74
MALAT1-206ENST00000612781 SSUH2Q9Y2M2 353 aa10.41□□□□□ -0.74
MALAT1-206ENST00000612781 PABPN1Q86U42 306 aaKnown RBP eCLIP10.3□□□□□ -0.76
MALAT1-206ENST00000612781 RBM42Q9BTD8 480 aaKnown RBP10.29□□□□□ -0.76
MALAT1-206ENST00000612781 FBXO3Q9UK99 471 aa10.23□□□□□ -0.77
MALAT1-206ENST00000612781 AKT1S1Q96B36 256 aa10.22□□□□□ -0.77
MALAT1-206ENST00000612781 VASPP50552 380 aaPredicted RBP10.15□□□□□ -0.78
MALAT1-206ENST00000612781 REM2Q8IYK8 340 aaPredicted RBP10.15□□□□□ -0.78
MALAT1-206ENST00000612781 STAG3Q9UJ98 1225 aa10.09□□□□□ -0.79
MALAT1-206ENST00000612781 SPDYE1Q8NFV5 336 aaPredicted RBP10.08□□□□□ -0.8
MALAT1-206ENST00000612781 IFNLR1Q8IU57 520 aaPredicted RBP10.06□□□□□ -0.8
MALAT1-206ENST00000612781 PITPNM1O00562 1244 aa10.05□□□□□ -0.8
MALAT1-206ENST00000612781 CLEC11AQ9Y240 323 aa10.03□□□□□ -0.8
MALAT1-206ENST00000612781 RTN4Q9NQC3 1192 aaKnown RBP10.01□□□□□ -0.81
MALAT1-206ENST00000612781 MIER1Q8N108 512 aa9.98□□□□□ -0.81
MALAT1-206ENST00000612781 PRR29P0C7W0 189 aa9.96□□□□□ -0.82
MALAT1-206ENST00000612781 PLCD3Q8N3E9 789 aa9.96□□□□□ -0.82
MALAT1-206ENST00000612781 AMER1Q5JTC6 1135 aaPredicted RBP9.95□□□□□ -0.82
MALAT1-206ENST00000612781 CREBZFQ9NS37 354 aa9.92□□□□□ -0.82
MALAT1-206ENST00000612781 KLHL34Q8N239 644 aa9.89□□□□□ -0.83
MALAT1-206ENST00000612781 MNX1P50219 401 aaPredicted RBP9.88□□□□□ -0.83
MALAT1-206ENST00000612781 CHRDL2Q6WN34 429 aa9.86□□□□□ -0.83
MALAT1-206ENST00000612781 SPOCK2Q92563 424 aa9.85□□□□□ -0.83
MALAT1-206ENST00000612781 PLEKHG5O94827 1062 aa9.84□□□□□ -0.83
MALAT1-206ENST00000612781 FXR2P51116 673 aaKnown RBP eCLIP9.83□□□□□ -0.84
MALAT1-206ENST00000612781 CHADLQ6NUI6 762 aa9.83□□□□□ -0.84
MALAT1-206ENST00000612781 ZBTB47Q9UFB7 747 aaPredicted RBP9.81□□□□□ -0.84
MALAT1-206ENST00000612781 PKD2Q13563 968 aa9.78□□□□□ -0.84
MALAT1-206ENST00000612781 PIP4P2Q8N4L2 257 aa9.78□□□□□ -0.84
MALAT1-206ENST00000612781 PRKAR2AP13861 404 aaKnown RBP9.77□□□□□ -0.85
MALAT1-206ENST00000612781 NUBP1P53384 320 aa9.77□□□□□ -0.85
MALAT1-206ENST00000612781 FARP1Q9Y4F1 1045 aaPredicted RBP9.73□□□□□ -0.85
MALAT1-206ENST00000612781 RASEFQ8IZ41 740 aa9.7□□□□□ -0.86
MALAT1-206ENST00000612781 NPM1P06748 294 aaKnown RBP eCLIP9.67□□□□□ -0.86
MALAT1-206ENST00000612781 CIZ1Q9ULV3 898 aaPredicted RBP9.67□□□□□ -0.86
MALAT1-206ENST00000612781 ECM2O94769 699 aaPredicted RBP9.63□□□□□ -0.87
MALAT1-206ENST00000612781 DCAF8Q5TAQ9 597 aa9.63□□□□□ -0.87
MALAT1-206ENST00000612781 GSE1Q14687 1217 aa9.62□□□□□ -0.87
MALAT1-206ENST00000612781 FAM212AQ96EL1 285 aa9.62□□□□□ -0.87
MALAT1-206ENST00000612781 RGL2O15211 777 aa9.58□□□□□ -0.88
MALAT1-206ENST00000612781 TSPYL2Q9H2G4 693 aaPredicted RBP9.57□□□□□ -0.88
MALAT1-206ENST00000612781 TRIM41Q8WV44 630 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms