RNA–Protein interactions for RNA: ENST00000437100.5

CPNE1-215, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-215ENST00000437100 NISCHQ9Y2I1 1504 aa35.53■■■■□ 3.28
CPNE1-215ENST00000437100 CCDC180Q9P1Z9 1646 aa31.42■■■□□ 2.62
CPNE1-215ENST00000437100 ABCC9O60706 1549 aa30.39■■■□□ 2.46
CPNE1-215ENST00000437100 ZCCHC6Q5VYS8 1495 aaKnown RBP29.71■■■□□ 2.35
CPNE1-215ENST00000437100 MYO15BQ96JP2 1530 aa29.48■■■□□ 2.31
CPNE1-215ENST00000437100 NACADO15069 1562 aa29.47■■■□□ 2.31
CPNE1-215ENST00000437100 DCAF1Q9Y4B6 1507 aa29.47■■■□□ 2.31
CPNE1-215ENST00000437100 RB1CC1Q8TDY2 1594 aa29.39■■■□□ 2.3
CPNE1-215ENST00000437100 DCAF8L2P0C7V8 631 aa29.35■■■□□ 2.29
CPNE1-215ENST00000437100 UNC13AQ9UPW8 1703 aa28.69■■■□□ 2.18
CPNE1-215ENST00000437100 SCRIBQ14160 1630 aa28.65■■■□□ 2.18
CPNE1-215ENST00000437100 BICRAQ9NZM4 1560 aa28.55■■■□□ 2.16
CPNE1-215ENST00000437100 PABPN1Q86U42 306 aaKnown RBP eCLIP28.44■■■□□ 2.14
CPNE1-215ENST00000437100 SHROOM4Q9ULL8 1493 aa28.32■■■□□ 2.12
CPNE1-215ENST00000437100 EIF4G1Q04637 1599 aaKnown RBP27.74■■■□□ 2.03
CPNE1-215ENST00000437100 DNAJC5BQ9UF47 199 aa27.64■■■□□ 2.02
CPNE1-215ENST00000437100 CECR2Q9BXF3 1484 aa27.64■■■□□ 2.01
CPNE1-215ENST00000437100 CC2D2AQ9P2K1 1620 aa27.52■■■□□ 2
CPNE1-215ENST00000437100 BAZ1AQ9NRL2 1556 aaPredicted RBP27.49■■□□□ 1.99
CPNE1-215ENST00000437100 SMARCA4P51532 1647 aa27.48■■□□□ 1.99
CPNE1-215ENST00000437100 MROH2BQ7Z745 1585 aa27.38■■□□□ 1.97
CPNE1-215ENST00000437100 ATAD2BQ9ULI0 1458 aa27.28■■□□□ 1.96
CPNE1-215ENST00000437100 PEG3Q9GZU2 1588 aa27.27■■□□□ 1.96
CPNE1-215ENST00000437100 SMARCA2P51531 1590 aa27.23■■□□□ 1.95
CPNE1-215ENST00000437100 NCAPD3P42695 1498 aa27.23■■□□□ 1.95
CPNE1-215ENST00000437100 RSF1Q96T23 1441 aaPredicted RBP27.21■■□□□ 1.95
CPNE1-215ENST00000437100 HMGXB3Q12766 1538 aa27.11■■□□□ 1.93
CPNE1-215ENST00000437100 WIZO95785 1651 aa27.05■■□□□ 1.92
CPNE1-215ENST00000437100 BAZ1BQ9UIG0 1483 aaKnown RBP27.02■■□□□ 1.92
CPNE1-215ENST00000437100 TOP2AP11388 1531 aaKnown RBP26.85■■□□□ 1.89
CPNE1-215ENST00000437100 SUPT5HO00267 1087 aaKnown RBP26.61■■□□□ 1.85
CPNE1-215ENST00000437100 CCDC88BA6NC98 1476 aa26.51■■□□□ 1.83
CPNE1-215ENST00000437100 NESP48681 1621 aa26.42■■□□□ 1.82
CPNE1-215ENST00000437100 CADPSQ9ULU8 1353 aa26.42■■□□□ 1.82
CPNE1-215ENST00000437100 LAMC3Q9Y6N6 1575 aa26.41■■□□□ 1.82
CPNE1-215ENST00000437100 CFTRP13569 1480 aa26.36■■□□□ 1.81
CPNE1-215ENST00000437100 PDS5BQ9NTI5 1447 aa26.21■■□□□ 1.79
CPNE1-215ENST00000437100 ERCC6Q03468 1493 aa26.14■■□□□ 1.78
CPNE1-215ENST00000437100 FANCD2Q9BXW9 1451 aa26.11■■□□□ 1.77
CPNE1-215ENST00000437100 PRDM2Q13029 1718 aa26.08■■□□□ 1.77
CPNE1-215ENST00000437100 KIF21AQ7Z4S6 1674 aa26.07■■□□□ 1.76
CPNE1-215ENST00000437100 CEP164Q9UPV0 1460 aa26.03■■□□□ 1.76
CPNE1-215ENST00000437100 THOC2Q8NI27 1593 aaKnown RBP25.98■■□□□ 1.75
CPNE1-215ENST00000437100 MRC2Q9UBG0 1479 aa25.94■■□□□ 1.74
CPNE1-215ENST00000437100 WDR62O43379 1518 aa25.88■■□□□ 1.73
CPNE1-215ENST00000437100 URB2Q14146 1524 aaKnown RBP25.84■■□□□ 1.73
CPNE1-215ENST00000437100 CUX2O14529 1486 aa25.83■■□□□ 1.73
CPNE1-215ENST00000437100 TOPBP1Q92547 1522 aa25.73■■□□□ 1.71
CPNE1-215ENST00000437100 ABCC8Q09428 1581 aa25.73■■□□□ 1.71
CPNE1-215ENST00000437100 DNMBPQ6XZF7 1577 aa25.72■■□□□ 1.71
CPNE1-215ENST00000437100 CUX1P39880 1505 aa25.67■■□□□ 1.7
CPNE1-215ENST00000437100 WRNQ14191 1432 aaPredicted RBP eCLIP25.61■■□□□ 1.69
CPNE1-215ENST00000437100 POLA1P09884 1462 aaPredicted RBP25.54■■□□□ 1.68
CPNE1-215ENST00000437100 SYNJ1O43426 1573 aa25.53■■□□□ 1.68
CPNE1-215ENST00000437100 TOP2BQ02880 1626 aa25.52■■□□□ 1.68
CPNE1-215ENST00000437100 FGD5Q6ZNL6 1462 aa25.51■■□□□ 1.67
CPNE1-215ENST00000437100 BIVM-ERCC5R4GMW8 1640 aa25.51■■□□□ 1.67
CPNE1-215ENST00000437100 IFT140Q96RY7 1462 aa25.49■■□□□ 1.67
CPNE1-215ENST00000437100 TARBP1Q13395 1621 aaKnown RBP25.43■■□□□ 1.66
CPNE1-215ENST00000437100 RAD54L2Q9Y4B4 1467 aa25.4■■□□□ 1.66
CPNE1-215ENST00000437100 SOGA1O94964 1423 aa25.4■■□□□ 1.66
CPNE1-215ENST00000437100 ZNF608Q9ULD9 1512 aaPredicted RBP25.34■■□□□ 1.65
CPNE1-215ENST00000437100 ABCA10Q8WWZ4 1543 aa25.32■■□□□ 1.64
CPNE1-215ENST00000437100 WDR97A6NE52 1622 aa25.3■■□□□ 1.64
CPNE1-215ENST00000437100 EIF4G3O43432 1585 aaKnown RBP25.24■■□□□ 1.63
CPNE1-215ENST00000437100 TDRD9Q8NDG6 1382 aaKnown RBP25.22■■□□□ 1.63
CPNE1-215ENST00000437100 AQRO60306 1485 aaKnown RBP eCLIP25.21■■□□□ 1.637e-7■■■■□ 21.9
CPNE1-215ENST00000437100 ABCA5Q8WWZ7 1642 aa25.17■■□□□ 1.62
CPNE1-215ENST00000437100 TRIM41Q8WV44 630 aa25.14■■□□□ 1.62
CPNE1-215ENST00000437100 GAPVD1Q14C86 1478 aa25.13■■□□□ 1.61
CPNE1-215ENST00000437100 CHIC1Q5VXU3 224 aa25.11■■□□□ 1.61
CPNE1-215ENST00000437100 GRIN2BQ13224 1484 aa25.09■■□□□ 1.61
CPNE1-215ENST00000437100 KIF27Q86VH2 1401 aa25.03■■□□□ 1.6
CPNE1-215ENST00000437100 PBRM1Q86U86 1689 aa25.01■■□□□ 1.59
CPNE1-215ENST00000437100 SNAPC4Q5SXM2 1469 aa25.01■■□□□ 1.59
CPNE1-215ENST00000437100 MAGI1Q96QZ7 1491 aaPredicted RBP25■■□□□ 1.59
CPNE1-215ENST00000437100 ERICH3Q5RHP9 1530 aa25■■□□□ 1.59
CPNE1-215ENST00000437100 IGF1RP08069 1367 aa24.93■■□□□ 1.58
CPNE1-215ENST00000437100 RUSC2Q8N2Y8 1516 aa24.91■■□□□ 1.58
CPNE1-215ENST00000437100 SYNJ2O15056 1496 aa24.9■■□□□ 1.58
CPNE1-215ENST00000437100 ADAMTS12P58397 1594 aa24.9■■□□□ 1.58
CPNE1-215ENST00000437100 FHAD1B1AJZ9 1412 aa24.87■■□□□ 1.57
CPNE1-215ENST00000437100 CHD1O14646 1710 aa24.81■■□□□ 1.56
CPNE1-215ENST00000437100 CUL7Q14999 1698 aa24.8■■□□□ 1.56
CPNE1-215ENST00000437100 EEA1Q15075 1411 aa24.79■■□□□ 1.56
CPNE1-215ENST00000437100 CHMP7Q8WUX9 453 aaPredicted RBP24.78■■□□□ 1.56
CPNE1-215ENST00000437100 GRIN2AQ12879 1464 aa24.77■■□□□ 1.56
CPNE1-215ENST00000437100 CARMIL1Q5VZK9 1371 aa24.75■■□□□ 1.55
CPNE1-215ENST00000437100 FBLN2P98095 1184 aa24.74■■□□□ 1.55
CPNE1-215ENST00000437100 OSCARQ8IYS5 282 aa24.74■■□□□ 1.55
CPNE1-215ENST00000437100 PRXQ9BXM0 1461 aa24.7■■□□□ 1.54
CPNE1-215ENST00000437100 NUP160Q12769 1436 aa24.69■■□□□ 1.54
CPNE1-215ENST00000437100 CSRNP3Q8WYN3 585 aa24.67■■□□□ 1.54
CPNE1-215ENST00000437100 CLASP1Q7Z460 1538 aa24.65■■□□□ 1.54
CPNE1-215ENST00000437100 RAPGEF2Q9Y4G8 1499 aa24.64■■□□□ 1.54
CPNE1-215ENST00000437100 CEP170Q5SW79 1584 aa24.64■■□□□ 1.54
CPNE1-215ENST00000437100 DNAJC5Q9H3Z4 198 aa24.62■■□□□ 1.53
CPNE1-215ENST00000437100 FAM9AQ8IZU1 332 aaPredicted RBP24.56■■□□□ 1.52
CPNE1-215ENST00000437100 KIAA0586Q9BVV6 1533 aa24.51■■□□□ 1.51
CPNE1-215ENST00000437100 KIF21BO75037 1637 aa24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms