RNA–Protein interactions for RNA: ENST00000505072.5

ATP2C1-209, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 4

Gene ATP2C1, Length 556 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-209ENST00000505072 NISCHQ9Y2I1 1504 aa31.07■■■□□ 2.56
ATP2C1-209ENST00000505072 ABCC9O60706 1549 aa28.64■■■□□ 2.18
ATP2C1-209ENST00000505072 CCDC180Q9P1Z9 1646 aa28.11■■■□□ 2.09
ATP2C1-209ENST00000505072 DNAJC5BQ9UF47 199 aa27.38■■□□□ 1.97
ATP2C1-209ENST00000505072 RB1CC1Q8TDY2 1594 aa27.05■■□□□ 1.92
ATP2C1-209ENST00000505072 NACADO15069 1562 aa26.73■■□□□ 1.87
ATP2C1-209ENST00000505072 PABPN1Q86U42 306 aaKnown RBP eCLIP26.59■■□□□ 1.85
ATP2C1-209ENST00000505072 DCAF8L2P0C7V8 631 aa26.43■■□□□ 1.82
ATP2C1-209ENST00000505072 UNC13AQ9UPW8 1703 aa26.39■■□□□ 1.81
ATP2C1-209ENST00000505072 BICRAQ9NZM4 1560 aa26.27■■□□□ 1.8
ATP2C1-209ENST00000505072 MYO15BQ96JP2 1530 aa26.21■■□□□ 1.79
ATP2C1-209ENST00000505072 SHROOM4Q9ULL8 1493 aa25.91■■□□□ 1.74
ATP2C1-209ENST00000505072 CECR2Q9BXF3 1484 aa25.89■■□□□ 1.73
ATP2C1-209ENST00000505072 CC2D2AQ9P2K1 1620 aa25.85■■□□□ 1.73
ATP2C1-209ENST00000505072 EIF4G1Q04637 1599 aaKnown RBP25.68■■□□□ 1.7
ATP2C1-209ENST00000505072 DCAF1Q9Y4B6 1507 aa25.66■■□□□ 1.7
ATP2C1-209ENST00000505072 ZCCHC6Q5VYS8 1495 aaKnown RBP25.63■■□□□ 1.69
ATP2C1-209ENST00000505072 DNAJC5Q9H3Z4 198 aa25.57■■□□□ 1.68
ATP2C1-209ENST00000505072 SCRIBQ14160 1630 aa25.55■■□□□ 1.68
ATP2C1-209ENST00000505072 CUX2O14529 1486 aa24.96■■□□□ 1.59
ATP2C1-209ENST00000505072 ERCC6Q03468 1493 aa24.78■■□□□ 1.56
ATP2C1-209ENST00000505072 NCAPD3P42695 1498 aa24.7■■□□□ 1.54
ATP2C1-209ENST00000505072 ATAD2BQ9ULI0 1458 aa24.53■■□□□ 1.52
ATP2C1-209ENST00000505072 HMGXB3Q12766 1538 aa24.45■■□□□ 1.51
ATP2C1-209ENST00000505072 NESP48681 1621 aa24.45■■□□□ 1.5
ATP2C1-209ENST00000505072 SMARCA2P51531 1590 aa24.42■■□□□ 1.5
ATP2C1-209ENST00000505072 SMARCA4P51532 1647 aa24.35■■□□□ 1.49
ATP2C1-209ENST00000505072 THOC2Q8NI27 1593 aaKnown RBP24.33■■□□□ 1.48
ATP2C1-209ENST00000505072 BAZ1BQ9UIG0 1483 aaKnown RBP24.25■■□□□ 1.47
ATP2C1-209ENST00000505072 LAMC3Q9Y6N6 1575 aa24.21■■□□□ 1.47
ATP2C1-209ENST00000505072 TRIM41Q8WV44 630 aa24.18■■□□□ 1.46
ATP2C1-209ENST00000505072 BAZ1AQ9NRL2 1556 aaPredicted RBP24.16■■□□□ 1.46
ATP2C1-209ENST00000505072 PEG3Q9GZU2 1588 aa24.14■■□□□ 1.45
ATP2C1-209ENST00000505072 PDS5BQ9NTI5 1447 aa24.1■■□□□ 1.45
ATP2C1-209ENST00000505072 KIF21AQ7Z4S6 1674 aa24.1■■□□□ 1.45
ATP2C1-209ENST00000505072 MROH2BQ7Z745 1585 aa23.92■■□□□ 1.42
ATP2C1-209ENST00000505072 MRC2Q9UBG0 1479 aa23.92■■□□□ 1.42
ATP2C1-209ENST00000505072 CADPSQ9ULU8 1353 aa23.91■■□□□ 1.42
ATP2C1-209ENST00000505072 WDR62O43379 1518 aa23.88■■□□□ 1.41
ATP2C1-209ENST00000505072 OSCARQ8IYS5 282 aa23.72■■□□□ 1.39
ATP2C1-209ENST00000505072 CEP164Q9UPV0 1460 aa23.7■■□□□ 1.38
ATP2C1-209ENST00000505072 FANCD2Q9BXW9 1451 aa23.63■■□□□ 1.37
ATP2C1-209ENST00000505072 WIZO95785 1651 aa23.59■■□□□ 1.37
ATP2C1-209ENST00000505072 CFTRP13569 1480 aa23.53■■□□□ 1.36
ATP2C1-209ENST00000505072 URB2Q14146 1524 aaKnown RBP23.47■■□□□ 1.35
ATP2C1-209ENST00000505072 RIMBP3CA6NJZ7 1639 aa23.44■■□□□ 1.34
ATP2C1-209ENST00000505072 RIMBP3BA6NNM3 1639 aa23.44■■□□□ 1.34
ATP2C1-209ENST00000505072 RIMBP3Q9UFD9 1639 aa23.44■■□□□ 1.34
ATP2C1-209ENST00000505072 ARHGEF11O15085 1522 aa23.33■■□□□ 1.32
ATP2C1-209ENST00000505072 TOP2AP11388 1531 aaKnown RBP23.28■■□□□ 1.32
ATP2C1-209ENST00000505072 IFT140Q96RY7 1462 aa23.27■■□□□ 1.32
ATP2C1-209ENST00000505072 ZNF608Q9ULD9 1512 aaPredicted RBP23.26■■□□□ 1.31
ATP2C1-209ENST00000505072 RSF1Q96T23 1441 aaPredicted RBP23.24■■□□□ 1.31
ATP2C1-209ENST00000505072 PRDM2Q13029 1718 aa23.2■■□□□ 1.3
ATP2C1-209ENST00000505072 CYB5RLQ6IPT4 315 aa23.18■■□□□ 1.3
ATP2C1-209ENST00000505072 TOPBP1Q92547 1522 aa23.12■■□□□ 1.29
ATP2C1-209ENST00000505072 TRHP20396 242 aaPredicted RBP23.1■■□□□ 1.29
ATP2C1-209ENST00000505072 EIF4G3O43432 1585 aaKnown RBP23.1■■□□□ 1.29
ATP2C1-209ENST00000505072 ARAP1Q96P48 1450 aa23.06■■□□□ 1.28
ATP2C1-209ENST00000505072 ABCC8Q09428 1581 aa23.06■■□□□ 1.28
ATP2C1-209ENST00000505072 CCDC88BA6NC98 1476 aa23.02■■□□□ 1.28
ATP2C1-209ENST00000505072 CHD1O14646 1710 aa23.02■■□□□ 1.28
ATP2C1-209ENST00000505072 AQRO60306 1485 aaKnown RBP eCLIP22.98■■□□□ 1.272e-13■■■■■ 30.6
ATP2C1-209ENST00000505072 DNMBPQ6XZF7 1577 aa22.98■■□□□ 1.27
ATP2C1-209ENST00000505072 TARBP1Q13395 1621 aaKnown RBP22.96■■□□□ 1.27
ATP2C1-209ENST00000505072 FBLN2P98095 1184 aa22.93■■□□□ 1.26
ATP2C1-209ENST00000505072 POLA1P09884 1462 aaPredicted RBP22.85■■□□□ 1.25
ATP2C1-209ENST00000505072 AEBP2Q6ZN18 517 aaPredicted RBP22.84■■□□□ 1.25
ATP2C1-209ENST00000505072 CLASP1Q7Z460 1538 aa22.77■■□□□ 1.24
ATP2C1-209ENST00000505072 RAD54L2Q9Y4B4 1467 aa22.76■■□□□ 1.23
ATP2C1-209ENST00000505072 TDRD9Q8NDG6 1382 aaKnown RBP22.76■■□□□ 1.23
ATP2C1-209ENST00000505072 SOGA1O94964 1423 aa22.74■■□□□ 1.23
ATP2C1-209ENST00000505072 SNAPC4Q5SXM2 1469 aa22.73■■□□□ 1.23
ATP2C1-209ENST00000505072 SYNJ1O43426 1573 aa22.71■■□□□ 1.23
ATP2C1-209ENST00000505072 WDR97A6NE52 1622 aa22.71■■□□□ 1.23
ATP2C1-209ENST00000505072 CHMP7Q8WUX9 453 aaPredicted RBP22.7■■□□□ 1.22
ATP2C1-209ENST00000505072 MAGI1Q96QZ7 1491 aaPredicted RBP22.67■■□□□ 1.22
ATP2C1-209ENST00000505072 GRIN2BQ13224 1484 aa22.61■■□□□ 1.21
ATP2C1-209ENST00000505072 FGD5Q6ZNL6 1462 aa22.61■■□□□ 1.21
ATP2C1-209ENST00000505072 SYNJ2O15056 1496 aa22.6■■□□□ 1.21
ATP2C1-209ENST00000505072 GAPVD1Q14C86 1478 aa22.58■■□□□ 1.2
ATP2C1-209ENST00000505072 CUX1P39880 1505 aa22.52■■□□□ 1.19
ATP2C1-209ENST00000505072 PBRM1Q86U86 1689 aa22.44■■□□□ 1.18
ATP2C1-209ENST00000505072 ERCC6L2Q5T890 1561 aa22.36■■□□□ 1.17
ATP2C1-209ENST00000505072 ABCA10Q8WWZ4 1543 aa22.35■■□□□ 1.17
ATP2C1-209ENST00000505072 ABCA5Q8WWZ7 1642 aa22.35■■□□□ 1.17
ATP2C1-209ENST00000505072 GRIN2AQ12879 1464 aa22.32■■□□□ 1.16
ATP2C1-209ENST00000505072 CEP170Q5SW79 1584 aa22.29■■□□□ 1.16
ATP2C1-209ENST00000505072 NUP160Q12769 1436 aa22.28■■□□□ 1.16
ATP2C1-209ENST00000505072 ADAMTS12P58397 1594 aa22.22■■□□□ 1.15
ATP2C1-209ENST00000505072 SHROOM2Q13796 1616 aa22.22■■□□□ 1.15
ATP2C1-209ENST00000505072 KIF13AQ9H1H9 1805 aa22.22■■□□□ 1.15
ATP2C1-209ENST00000505072 FHAD1B1AJZ9 1412 aa22.15■■□□□ 1.14
ATP2C1-209ENST00000505072 WRNQ14191 1432 aaPredicted RBP eCLIP22.14■■□□□ 1.14
ATP2C1-209ENST00000505072 PRG4Q92954 1404 aaPredicted RBP22.09■■□□□ 1.13
ATP2C1-209ENST00000505072 ABCC10Q5T3U5 1492 aa22.07■■□□□ 1.12
ATP2C1-209ENST00000505072 FAM69CQ0P6D2 419 aa22.06■■□□□ 1.12
ATP2C1-209ENST00000505072 ERICH3Q5RHP9 1530 aa22.06■■□□□ 1.12
ATP2C1-209ENST00000505072 JPH4Q96JJ6 628 aa22.03■■□□□ 1.12
ATP2C1-209ENST00000505072 MAPKBP1O60336 1514 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms