RNA–Protein interactions for RNA: ENST00000509662.5

ATP2C1-217, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 4

Gene ATP2C1, Length 559 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-217ENST00000509662 NISCHQ9Y2I1 1504 aa57.98■■■■■ 6.87
ATP2C1-217ENST00000509662 CCDC180Q9P1Z9 1646 aa51.71■■■■■ 5.87
ATP2C1-217ENST00000509662 ABCC9O60706 1549 aa51.04■■■■■ 5.76
ATP2C1-217ENST00000509662 RB1CC1Q8TDY2 1594 aa48.94■■■■■ 5.42
ATP2C1-217ENST00000509662 DCAF8L2P0C7V8 631 aa48.79■■■■■ 5.4
ATP2C1-217ENST00000509662 NACADO15069 1562 aa48.77■■■■■ 5.4
ATP2C1-217ENST00000509662 MYO15BQ96JP2 1530 aa48.32■■■■■ 5.33
ATP2C1-217ENST00000509662 ZCCHC6Q5VYS8 1495 aaKnown RBP48.16■■■■■ 5.3
ATP2C1-217ENST00000509662 DCAF1Q9Y4B6 1507 aa47.95■■■■■ 5.27
ATP2C1-217ENST00000509662 UNC13AQ9UPW8 1703 aa47.7■■■■■ 5.23
ATP2C1-217ENST00000509662 PABPN1Q86U42 306 aaKnown RBP eCLIP47.68■■■■■ 5.22
ATP2C1-217ENST00000509662 BICRAQ9NZM4 1560 aa47.38■■■■■ 5.18
ATP2C1-217ENST00000509662 DNAJC5BQ9UF47 199 aa47.25■■■■■ 5.15
ATP2C1-217ENST00000509662 SCRIBQ14160 1630 aa47.14■■■■■ 5.14
ATP2C1-217ENST00000509662 SHROOM4Q9ULL8 1493 aa46.92■■■■■ 5.1
ATP2C1-217ENST00000509662 EIF4G1Q04637 1599 aaKnown RBP46.21■■■■■ 4.99
ATP2C1-217ENST00000509662 CC2D2AQ9P2K1 1620 aa46.13■■■■■ 4.97
ATP2C1-217ENST00000509662 CECR2Q9BXF3 1484 aa45.93■■■■■ 4.94
ATP2C1-217ENST00000509662 SMARCA4P51532 1647 aa45.05■■■■■ 4.8
ATP2C1-217ENST00000509662 NCAPD3P42695 1498 aa45.02■■■■■ 4.8
ATP2C1-217ENST00000509662 BAZ1AQ9NRL2 1556 aaPredicted RBP44.98■■■■■ 4.79
ATP2C1-217ENST00000509662 ATAD2BQ9ULI0 1458 aa44.94■■■■■ 4.78
ATP2C1-217ENST00000509662 SMARCA2P51531 1590 aa44.9■■■■■ 4.78
ATP2C1-217ENST00000509662 HMGXB3Q12766 1538 aa44.7■■■■■ 4.75
ATP2C1-217ENST00000509662 MROH2BQ7Z745 1585 aa44.65■■■■■ 4.74
ATP2C1-217ENST00000509662 PEG3Q9GZU2 1588 aa44.61■■■■■ 4.73
ATP2C1-217ENST00000509662 BAZ1BQ9UIG0 1483 aaKnown RBP44.58■■■■■ 4.73
ATP2C1-217ENST00000509662 WIZO95785 1651 aa44.14■■■■■ 4.66
ATP2C1-217ENST00000509662 ERCC6Q03468 1493 aa44.08■■■■■ 4.65
ATP2C1-217ENST00000509662 RSF1Q96T23 1441 aaPredicted RBP44.02■■■■■ 4.64
ATP2C1-217ENST00000509662 NESP48681 1621 aa44.01■■■■■ 4.64
ATP2C1-217ENST00000509662 LAMC3Q9Y6N6 1575 aa43.88■■■■■ 4.62
ATP2C1-217ENST00000509662 CUX2O14529 1486 aa43.74■■■■■ 4.59
ATP2C1-217ENST00000509662 CADPSQ9ULU8 1353 aa43.7■■■■■ 4.59
ATP2C1-217ENST00000509662 PDS5BQ9NTI5 1447 aa43.67■■■■■ 4.58
ATP2C1-217ENST00000509662 TOP2AP11388 1531 aaKnown RBP43.66■■■■■ 4.58
ATP2C1-217ENST00000509662 KIF21AQ7Z4S6 1674 aa43.46■■■■■ 4.55
ATP2C1-217ENST00000509662 THOC2Q8NI27 1593 aaKnown RBP43.39■■■■■ 4.54
ATP2C1-217ENST00000509662 CFTRP13569 1480 aa43.32■■■■■ 4.52
ATP2C1-217ENST00000509662 CCDC88BA6NC98 1476 aa43.19■■■■■ 4.5
ATP2C1-217ENST00000509662 MRC2Q9UBG0 1479 aa43.19■■■■■ 4.5
ATP2C1-217ENST00000509662 FANCD2Q9BXW9 1451 aa43.17■■■■■ 4.5
ATP2C1-217ENST00000509662 CEP164Q9UPV0 1460 aa43.17■■■■■ 4.5
ATP2C1-217ENST00000509662 WDR62O43379 1518 aa43.02■■■■■ 4.48
ATP2C1-217ENST00000509662 DNAJC5Q9H3Z4 198 aa42.97■■■■■ 4.47
ATP2C1-217ENST00000509662 PRDM2Q13029 1718 aa42.89■■■■■ 4.46
ATP2C1-217ENST00000509662 URB2Q14146 1524 aaKnown RBP42.72■■■■■ 4.43
ATP2C1-217ENST00000509662 SUPT5HO00267 1087 aaKnown RBP42.69■■■■■ 4.42
ATP2C1-217ENST00000509662 ABCC8Q09428 1581 aa42.48■■■■■ 4.39
ATP2C1-217ENST00000509662 TOPBP1Q92547 1522 aa42.41■■■■■ 4.38
ATP2C1-217ENST00000509662 DNMBPQ6XZF7 1577 aa42.32■■■■■ 4.37
ATP2C1-217ENST00000509662 IFT140Q96RY7 1462 aa42.29■■■■■ 4.36
ATP2C1-217ENST00000509662 ZNF608Q9ULD9 1512 aaPredicted RBP42.08■■■■■ 4.33
ATP2C1-217ENST00000509662 POLA1P09884 1462 aaPredicted RBP42.02■■■■■ 4.32
ATP2C1-217ENST00000509662 OSCARQ8IYS5 282 aa41.97■■■■■ 4.31
ATP2C1-217ENST00000509662 TARBP1Q13395 1621 aaKnown RBP41.95■■■■■ 4.31
ATP2C1-217ENST00000509662 SOGA1O94964 1423 aa41.92■■■■■ 4.3
ATP2C1-217ENST00000509662 CUX1P39880 1505 aa41.91■■■■■ 4.3
ATP2C1-217ENST00000509662 EIF4G3O43432 1585 aaKnown RBP41.88■■■■■ 4.29
ATP2C1-217ENST00000509662 FGD5Q6ZNL6 1462 aa41.86■■■■■ 4.29
ATP2C1-217ENST00000509662 RAD54L2Q9Y4B4 1467 aa41.85■■■■■ 4.29
ATP2C1-217ENST00000509662 AQRO60306 1485 aaKnown RBP eCLIP41.84■■■■■ 4.292e-13■■■■■ 30.6
ATP2C1-217ENST00000509662 TDRD9Q8NDG6 1382 aaKnown RBP41.72■■■■■ 4.27
ATP2C1-217ENST00000509662 WDR97A6NE52 1622 aa41.64■■■■■ 4.26
ATP2C1-217ENST00000509662 WRNQ14191 1432 aaPredicted RBP eCLIP41.55■■■■■ 4.24
ATP2C1-217ENST00000509662 FBLN2P98095 1184 aa41.53■■■■■ 4.24
ATP2C1-217ENST00000509662 GRIN2BQ13224 1484 aa41.46■■■■■ 4.23
ATP2C1-217ENST00000509662 TOP2BQ02880 1626 aa41.45■■■■■ 4.23
ATP2C1-217ENST00000509662 ABCA10Q8WWZ4 1543 aa41.44■■■■■ 4.23
ATP2C1-217ENST00000509662 CHD1O14646 1710 aa41.43■■■■■ 4.22
ATP2C1-217ENST00000509662 BIVM-ERCC5R4GMW8 1640 aa41.43■■■■■ 4.22
ATP2C1-217ENST00000509662 SNAPC4Q5SXM2 1469 aa41.41■■■■■ 4.22
ATP2C1-217ENST00000509662 GAPVD1Q14C86 1478 aa41.4■■■■■ 4.22
ATP2C1-217ENST00000509662 TRIM41Q8WV44 630 aa41.39■■■■■ 4.22
ATP2C1-217ENST00000509662 MAGI1Q96QZ7 1491 aaPredicted RBP41.38■■■■■ 4.21
ATP2C1-217ENST00000509662 SYNJ1O43426 1573 aa41.37■■■■■ 4.21
ATP2C1-217ENST00000509662 CHMP7Q8WUX9 453 aaPredicted RBP41.36■■■■■ 4.21
ATP2C1-217ENST00000509662 ABCA5Q8WWZ7 1642 aa41.26■■■■■ 4.19
ATP2C1-217ENST00000509662 PBRM1Q86U86 1689 aa41.25■■■■■ 4.19
ATP2C1-217ENST00000509662 SYNJ2O15056 1496 aa41.22■■■■■ 4.19
ATP2C1-217ENST00000509662 RIMBP3CA6NJZ7 1639 aa41.18■■■■■ 4.18
ATP2C1-217ENST00000509662 RIMBP3BA6NNM3 1639 aa41.18■■■■■ 4.18
ATP2C1-217ENST00000509662 RIMBP3Q9UFD9 1639 aa41.18■■■■■ 4.18
ATP2C1-217ENST00000509662 ARHGEF11O15085 1522 aa41.14■■■■■ 4.18
ATP2C1-217ENST00000509662 CLASP1Q7Z460 1538 aa40.98■■■■■ 4.15
ATP2C1-217ENST00000509662 ERICH3Q5RHP9 1530 aa40.95■■■■■ 4.15
ATP2C1-217ENST00000509662 CYB5RLQ6IPT4 315 aa40.91■■■■■ 4.14
ATP2C1-217ENST00000509662 FHAD1B1AJZ9 1412 aa40.91■■■■■ 4.14
ATP2C1-217ENST00000509662 ADAMTS12P58397 1594 aa40.9■■■■■ 4.14
ATP2C1-217ENST00000509662 GRIN2AQ12879 1464 aa40.89■■■■■ 4.14
ATP2C1-217ENST00000509662 ARAP1Q96P48 1450 aa40.77■■■■■ 4.12
ATP2C1-217ENST00000509662 KIF27Q86VH2 1401 aa40.75■■■■■ 4.11
ATP2C1-217ENST00000509662 NUP160Q12769 1436 aa40.71■■■■■ 4.11
ATP2C1-217ENST00000509662 CEP170Q5SW79 1584 aa40.65■■■■■ 4.1
ATP2C1-217ENST00000509662 IGF1RP08069 1367 aa40.61■■■■■ 4.09
ATP2C1-217ENST00000509662 CUL7Q14999 1698 aa40.49■■■■■ 4.07
ATP2C1-217ENST00000509662 SHROOM2Q13796 1616 aa40.42■■■■■ 4.06
ATP2C1-217ENST00000509662 JPH4Q96JJ6 628 aa40.41■■■■■ 4.06
ATP2C1-217ENST00000509662 CARMIL1Q5VZK9 1371 aa40.39■■■■■ 4.06
ATP2C1-217ENST00000509662 ERCC6L2Q5T890 1561 aa40.35■■■■■ 4.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms