RNA–Protein interactions for RNA: ENST00000575669.1

RPS15A-211, Transcript of ribosomal protein S15a, humanhuman

Gene RPS15A, Length 3,828 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS15A-211ENST00000575669 NISCHQ9Y2I1 1504 aa14.98□□□□□ -0.01
RPS15A-211ENST00000575669 DCAF8L2P0C7V8 631 aa13.73□□□□□ -0.21
RPS15A-211ENST00000575669 SHROOM4Q9ULL8 1493 aa13.29□□□□□ -0.28
RPS15A-211ENST00000575669 SUPT5HO00267 1087 aaKnown RBP13.16□□□□□ -0.3
RPS15A-211ENST00000575669 CCDC180Q9P1Z9 1646 aa12.93□□□□□ -0.34
RPS15A-211ENST00000575669 ABCC9O60706 1549 aa12.52□□□□□ -0.41
RPS15A-211ENST00000575669 ZCCHC6Q5VYS8 1495 aaKnown RBP12.5□□□□□ -0.41
RPS15A-211ENST00000575669 EHMT2Q96KQ7 1210 aa12.32□□□□□ -0.44
RPS15A-211ENST00000575669 FAM9AQ8IZU1 332 aaPredicted RBP12.27□□□□□ -0.45
RPS15A-211ENST00000575669 TRIM41Q8WV44 630 aa12.25□□□□□ -0.45
RPS15A-211ENST00000575669 CHIC1Q5VXU3 224 aa12.23□□□□□ -0.45
RPS15A-211ENST00000575669 PABPN1Q86U42 306 aaKnown RBP eCLIP12.16□□□□□ -0.46
RPS15A-211ENST00000575669 RB1CC1Q8TDY2 1594 aa12.15□□□□□ -0.47
RPS15A-211ENST00000575669 MYO15BQ96JP2 1530 aa12.14□□□□□ -0.47
RPS15A-211ENST00000575669 NACADO15069 1562 aa12.12□□□□□ -0.47
RPS15A-211ENST00000575669 SCRIBQ14160 1630 aa12.11□□□□□ -0.47
RPS15A-211ENST00000575669 DCAF1Q9Y4B6 1507 aa12.08□□□□□ -0.48
RPS15A-211ENST00000575669 LOC105371045A0A1W2PR82 267 aa12□□□□□ -0.49
RPS15A-211ENST00000575669 PCGF6Q9BYE7 350 aa11.99□□□□□ -0.49
RPS15A-211ENST00000575669 UBTFP17480 764 aaKnown RBP11.88□□□□□ -0.51
RPS15A-211ENST00000575669 UNC13AQ9UPW8 1703 aa11.87□□□□□ -0.51
RPS15A-211ENST00000575669 RSF1Q96T23 1441 aaPredicted RBP11.86□□□□□ -0.51
RPS15A-211ENST00000575669 RANGAP1P46060 587 aaPredicted RBP11.84□□□□□ -0.51
RPS15A-211ENST00000575669 TTBK1Q5TCY1 1321 aaPredicted RBP11.84□□□□□ -0.51
RPS15A-211ENST00000575669 APLP2Q06481 763 aa11.83□□□□□ -0.52
RPS15A-211ENST00000575669 BICRAQ9NZM4 1560 aa11.76□□□□□ -0.53
RPS15A-211ENST00000575669 CECR2Q9BXF3 1484 aa11.76□□□□□ -0.53
RPS15A-211ENST00000575669 PPARGC1BQ86YN6 1023 aaKnown RBP11.74□□□□□ -0.53
RPS15A-211ENST00000575669 TRIM26Q12899 539 aaPredicted RBP11.69□□□□□ -0.54
RPS15A-211ENST00000575669 BAZ1AQ9NRL2 1556 aaPredicted RBP11.62□□□□□ -0.55
RPS15A-211ENST00000575669 MROH2BQ7Z745 1585 aa11.62□□□□□ -0.55
RPS15A-211ENST00000575669 DNAJC5BQ9UF47 199 aa11.61□□□□□ -0.55
RPS15A-211ENST00000575669 ATP1B4Q9UN42 357 aaPredicted RBP11.57□□□□□ -0.56
RPS15A-211ENST00000575669 CSRNP3Q8WYN3 585 aa11.57□□□□□ -0.56
RPS15A-211ENST00000575669 CCER1Q8TC90 406 aaPredicted RBP11.55□□□□□ -0.56
RPS15A-211ENST00000575669 HRCP23327 699 aa11.53□□□□□ -0.56
RPS15A-211ENST00000575669 ZEB1P37275 1124 aaPredicted RBP11.53□□□□□ -0.56
RPS15A-211ENST00000575669 PELP1Q8IZL8 1130 aaKnown RBP11.51□□□□□ -0.57
RPS15A-211ENST00000575669 BAZ1BQ9UIG0 1483 aaKnown RBP11.48□□□□□ -0.57
RPS15A-211ENST00000575669 WIZO95785 1651 aa11.45□□□□□ -0.58
RPS15A-211ENST00000575669 MYT1Q01538 1121 aa11.43□□□□□ -0.58
RPS15A-211ENST00000575669 CCDC88BA6NC98 1476 aa11.42□□□□□ -0.58
RPS15A-211ENST00000575669 CC2D2AQ9P2K1 1620 aa11.42□□□□□ -0.58
RPS15A-211ENST00000575669 EIF4G1Q04637 1599 aaKnown RBP11.41□□□□□ -0.58
RPS15A-211ENST00000575669 WRNQ14191 1432 aaPredicted RBP eCLIP11.39□□□□□ -0.59
RPS15A-211ENST00000575669 HNRNPUL2Q1KMD3 747 aaKnown RBP11.39□□□□□ -0.59
RPS15A-211ENST00000575669 SMARCA4P51532 1647 aa11.36□□□□□ -0.59
RPS15A-211ENST00000575669 TOP2AP11388 1531 aaKnown RBP11.35□□□□□ -0.59
RPS15A-211ENST00000575669 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.34□□□□□ -0.59
RPS15A-211ENST00000575669 ITGAEP38570 1179 aa11.34□□□□□ -0.59
RPS15A-211ENST00000575669 ATAD2BQ9ULI0 1458 aa11.32□□□□□ -0.6
RPS15A-211ENST00000575669 SMARCA2P51531 1590 aa11.31□□□□□ -0.6
RPS15A-211ENST00000575669 EEA1Q15075 1411 aa11.3□□□□□ -0.6
RPS15A-211ENST00000575669 ABCC8Q09428 1581 aa11.29□□□□□ -0.6
RPS15A-211ENST00000575669 SOGA1O94964 1423 aa11.27□□□□□ -0.6
RPS15A-211ENST00000575669 P3H3Q8IVL6 736 aa11.26□□□□□ -0.61
RPS15A-211ENST00000575669 CEP162Q5TB80 1403 aa11.22□□□□□ -0.61
RPS15A-211ENST00000575669 GOLGA3Q08378 1498 aa11.21□□□□□ -0.61
RPS15A-211ENST00000575669 TNIKQ9UKE5 1360 aa11.2□□□□□ -0.62
RPS15A-211ENST00000575669 CLIP1P30622 1438 aa11.2□□□□□ -0.62
RPS15A-211ENST00000575669 FBLN2P98095 1184 aa11.18□□□□□ -0.62
RPS15A-211ENST00000575669 KIF27Q86VH2 1401 aa11.17□□□□□ -0.62
RPS15A-211ENST00000575669 FAM50AQ14320 339 aaKnown RBP11.17□□□□□ -0.62
RPS15A-211ENST00000575669 CEP164Q9UPV0 1460 aa11.16□□□□□ -0.62
RPS15A-211ENST00000575669 CUX2O14529 1486 aa11.12□□□□□ -0.63
RPS15A-211ENST00000575669 CADPSQ9ULU8 1353 aa11.12□□□□□ -0.63
RPS15A-211ENST00000575669 NCAPD3P42695 1498 aa11.12□□□□□ -0.63
RPS15A-211ENST00000575669 HMGXB3Q12766 1538 aa11.11□□□□□ -0.63
RPS15A-211ENST00000575669 PEG3Q9GZU2 1588 aa11.09□□□□□ -0.63
RPS15A-211ENST00000575669 RUSC2Q8N2Y8 1516 aa11.09□□□□□ -0.63
RPS15A-211ENST00000575669 ARID3CA6NKF2 412 aa11.08□□□□□ -0.64
RPS15A-211ENST00000575669 CARMIL1Q5VZK9 1371 aa11.04□□□□□ -0.64
RPS15A-211ENST00000575669 CENPBP07199 599 aaPredicted RBP11.02□□□□□ -0.65
RPS15A-211ENST00000575669 PDS5BQ9NTI5 1447 aa10.99□□□□□ -0.65
RPS15A-211ENST00000575669 DIEXFQ68CQ4 756 aaKnown RBP10.99□□□□□ -0.65
RPS15A-211ENST00000575669 RAPGEF2Q9Y4G8 1499 aa10.98□□□□□ -0.65
RPS15A-211ENST00000575669 CHMP7Q8WUX9 453 aaPredicted RBP10.98□□□□□ -0.65
RPS15A-211ENST00000575669 YTHDC1Q96MU7 727 aaKnown RBP10.98□□□□□ -0.65
RPS15A-211ENST00000575669 NEUROD1Q13562 356 aa10.97□□□□□ -0.65
RPS15A-211ENST00000575669 TDRD9Q8NDG6 1382 aaKnown RBP10.96□□□□□ -0.65
RPS15A-211ENST00000575669 FANCD2Q9BXW9 1451 aa10.95□□□□□ -0.66
RPS15A-211ENST00000575669 TRIM52Q96A61 297 aa10.95□□□□□ -0.66
RPS15A-211ENST00000575669 VPS8Q8N3P4 1428 aa10.95□□□□□ -0.66
RPS15A-211ENST00000575669 CFTRP13569 1480 aa10.94□□□□□ -0.66
RPS15A-211ENST00000575669 CDK11AQ9UQ88 783 aaPredicted RBP10.94□□□□□ -0.66
RPS15A-211ENST00000575669 DNAJC5Q9H3Z4 198 aa10.93□□□□□ -0.66
RPS15A-211ENST00000575669 MTUS2Q5JR59 1369 aa10.93□□□□□ -0.66
RPS15A-211ENST00000575669 ERCC6Q03468 1493 aa10.92□□□□□ -0.66
RPS15A-211ENST00000575669 LAMC3Q9Y6N6 1575 aa10.92□□□□□ -0.66
RPS15A-211ENST00000575669 MYT1LQ9UL68 1186 aa10.91□□□□□ -0.66
RPS15A-211ENST00000575669 SYNJ1O43426 1573 aa10.91□□□□□ -0.66
RPS15A-211ENST00000575669 ZNF316A6NFI3 1004 aaPredicted RBP10.9□□□□□ -0.66
RPS15A-211ENST00000575669 KANK4Q5T7N3 995 aaPredicted RBP10.89□□□□□ -0.67
RPS15A-211ENST00000575669 THOC2Q8NI27 1593 aaKnown RBP10.89□□□□□ -0.67
RPS15A-211ENST00000575669 ZNF777Q9ULD5 760 aaPredicted RBP10.88□□□□□ -0.67
RPS15A-211ENST00000575669 IGF1RP08069 1367 aa10.88□□□□□ -0.67
RPS15A-211ENST00000575669 FGD5Q6ZNL6 1462 aa10.87□□□□□ -0.67
RPS15A-211ENST00000575669 FHAD1B1AJZ9 1412 aa10.86□□□□□ -0.67
RPS15A-211ENST00000575669 CHIC2Q9UKJ5 165 aa10.85□□□□□ -0.67
RPS15A-211ENST00000575669 NESP48681 1621 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 1163.3 ms