Protein–RNA interactions for Protein: P53999

SUB1, Activated RNA polymerase II transcriptional coactivator p15, humanhuman

Known RBP eCLIP

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1P53999 ZC3H15-201ENST00000337859 2138 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.397e-8■■□□□ 12.3
SUB1P53999 HSPA8-220ENST00000533238 465 ntTSL 34.95□□□□□ -1.627e-7■■□□□ 12.3
SUB1P53999 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.222e-10■■□□□ 12.3
SUB1P53999 GAPDH-206ENST00000466525 1720 ntTSL 512.16□□□□□ -0.462e-10■■□□□ 12.3
SUB1P53999 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC11.88□□□□□ -0.512e-10■■□□□ 12.3
SUB1P53999 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC11.03□□□□□ -0.642e-10■■□□□ 12.3
SUB1P53999 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.712e-10■■□□□ 12.3
SUB1P53999 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC10.36□□□□□ -0.752e-10■■□□□ 12.3
SUB1P53999 GAPDH-205ENST00000396861 1348 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.842e-10■■□□□ 12.3
SUB1P53999 GAPDH-209ENST00000492719 930 ntTSL 39.81□□□□□ -0.842e-10■■□□□ 12.3
SUB1P53999 GAPDH-208ENST00000474249 1333 ntTSL 59.38□□□□□ -0.912e-10■■□□□ 12.3
SUB1P53999 GAPDH-202ENST00000396856 1266 ntTSL 5 BASIC8.99□□□□□ -0.972e-10■■□□□ 12.3
SUB1P53999 GAPDH-207ENST00000466588 1363 ntTSL 58.72□□□□□ -1.012e-10■■□□□ 12.3
SUB1P53999 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC4.43□□□□□ -1.72e-10■■□□□ 12.3
SUB1P53999 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.02□□□□□ -1.932e-10■■□□□ 12.3
SUB1P53999 NUP214-217ENST00000526412 551 ntTSL 52.01□□□□□ -2.092e-10■■□□□ 12.3
SUB1P53999 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC13.36□□□□□ -0.278e-8■■□□□ 12.3
SUB1P53999 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC13.35□□□□□ -0.278e-8■■□□□ 12.3
SUB1P53999 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.358e-8■■□□□ 12.3
SUB1P53999 NDUFB9-205ENST00000518657 672 ntTSL 26.42□□□□□ -1.388e-8■■□□□ 12.3
SUB1P53999 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC16.09■□□□□ 0.173e-9■■□□□ 12.2
SUB1P53999 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.153e-9■■□□□ 12.2
SUB1P53999 SRRM2-218ENST00000574331 1759 ntTSL 214.29□□□□□ -0.123e-9■■□□□ 12.2
SUB1P53999 SRRM2-217ENST00000573692 459 ntTSL 313.59□□□□□ -0.233e-9■■□□□ 12.2
SUB1P53999 SRRM2-216ENST00000573583 543 ntTSL 48.56□□□□□ -1.043e-9■■□□□ 12.2
SUB1P53999 SRRM2-202ENST00000570539 431 ntTSL 27.55□□□□□ -1.23e-9■■□□□ 12.2
SUB1P53999 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.059e-8■■□□□ 12.2
SUB1P53999 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.249e-8■■□□□ 12.2
SUB1P53999 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.49e-8■■□□□ 12.2
SUB1P53999 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC12.89□□□□□ -0.354e-7■■□□□ 12.2
SUB1P53999 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.453e-6■■□□□ 12.2
SUB1P53999 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC11.81□□□□□ -0.523e-6■■□□□ 12.2
SUB1P53999 MATR3-233ENST00000504203 2243 ntTSL 2 BASIC10.49□□□□□ -0.731e-15■■□□□ 12.2
SUB1P53999 CCT5-209ENST00000511700 582 ntTSL 310.38□□□□□ -0.754e-6■■□□□ 12.2
SUB1P53999 CCT5-206ENST00000508451 555 ntTSL 28.19□□□□□ -1.14e-6■■□□□ 12.2
SUB1P53999 CCT5-204ENST00000503454 762 ntTSL 36.64□□□□□ -1.354e-6■■□□□ 12.2
SUB1P53999 CCT5-202ENST00000423695 1232 ntTSL 26.1□□□□□ -1.434e-6■■□□□ 12.2
SUB1P53999 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC5.63□□□□□ -1.513e-6■■□□□ 12.2
SUB1P53999 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC5.26□□□□□ -1.571e-15■■□□□ 12.2
SUB1P53999 CCT5-211ENST00000512975 578 ntTSL 44.91□□□□□ -1.624e-6■■□□□ 12.2
SUB1P53999 CCT5-215ENST00000625723 135 ntTSL 5 BASIC3.39□□□□□ -1.874e-6■■□□□ 12.2
SUB1P53999 MATR3-202ENST00000502422 2250 ntTSL 1 (best)3.32□□□□□ -1.881e-15■■□□□ 12.2
SUB1P53999 PIEZO1-203ENST00000419505 1635 ntTSL 1 (best)15.61■□□□□ 0.096e-7■■□□□ 12.2
SUB1P53999 PIEZO1-208ENST00000484567 2464 ntTSL 214.3□□□□□ -0.126e-7■■□□□ 12.2
SUB1P53999 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC13.81□□□□□ -0.26e-7■■□□□ 12.2
SUB1P53999 EIF2S3-201ENST00000253039 2858 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.441e-13■■□□□ 12.2
SUB1P53999 EIF2S3-203ENST00000457332 215 ntTSL 52.96□□□□□ -1.941e-13■■□□□ 12.2
SUB1P53999 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.546e-7■■□□□ 12.2
SUB1P53999 RPS5-207ENST00000599232 1747 nt13.65□□□□□ -0.221e-12■■□□□ 12.2
SUB1P53999 MYL6-212ENST00000548725 582 ntTSL 28.67□□□□□ -1.024e-7■■□□□ 12.2
SUB1P53999 MYL6-214ENST00000549392 411 ntTSL 57.38□□□□□ -1.234e-7■■□□□ 12.2
SUB1P53999 MYL6-221ENST00000552297 454 ntTSL 34.37□□□□□ -1.714e-7■■□□□ 12.2
SUB1P53999 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.054e-6■■□□□ 12.2
SUB1P53999 NDFIP1-202ENST00000503388 4164 ntTSL 24.32□□□□□ -1.724e-6■■□□□ 12.2
SUB1P53999 ATP5B-207ENST00000551020 856 ntTSL 314.28□□□□□ -0.122e-10■■□□□ 12.1
SUB1P53999 ATP5B-203ENST00000547808 705 ntTSL 514.1□□□□□ -0.152e-10■■□□□ 12.1
SUB1P53999 ATP5B-210ENST00000552959 1085 ntTSL 313.45□□□□□ -0.262e-10■■□□□ 12.1
SUB1P53999 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.221e-6■■□□□ 12.1
SUB1P53999 PPIG-202ENST00000409714 2615 ntTSL 1 (best) BASIC8.16□□□□□ -1.15e-8■■□□□ 12.1
SUB1P53999 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.765e-8■■□□□ 12.1
SUB1P53999 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.393e-7■■□□□ 12.1
SUB1P53999 NDUFB11-201ENST00000276062 948 ntTSL 1 (best) BASIC10.47□□□□□ -0.732e-6■■□□□ 12.1
SUB1P53999 NDUFB11-202ENST00000377811 1388 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.772e-6■■□□□ 12.1
SUB1P53999 ATP1B3-209ENST00000487199 421 ntTSL 31.96□□□□□ -2.11e-18■■□□□ 12.1
SUB1P53999 ZC3H15-204ENST00000445547 776 ntTSL 22.33□□□□□ -2.048e-8■■□□□ 12.1
SUB1P53999 RPS20-209ENST00000521289 737 ntTSL 57.89□□□□□ -1.151e-9■■□□□ 12.1
SUB1P53999 PSMA7-205ENST00000484488 1023 ntTSL 317.61■□□□□ 0.413e-10■■□□□ 12.1
SUB1P53999 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.233e-10■■□□□ 12.1
SUB1P53999 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.28e-18■■□□□ 12.1
SUB1P53999 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.118e-18■■□□□ 12.1
SUB1P53999 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.48e-18■■□□□ 12.1
SUB1P53999 TAF15-206ENST00000603967 656 ntTSL 312.47□□□□□ -0.418e-18■■□□□ 12.1
SUB1P53999 TAF15-210ENST00000604694 891 ntTSL 512.47□□□□□ -0.418e-18■■□□□ 12.1
SUB1P53999 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.287e-9■■□□□ 12.1
SUB1P53999 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.157e-9■■□□□ 12.1
SUB1P53999 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.047e-9■■□□□ 12.1
SUB1P53999 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC13.06□□□□□ -0.325e-7■■□□□ 12
SUB1P53999 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.325e-23■■□□□ 12
SUB1P53999 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.21e-19■■□□□ 12
SUB1P53999 RPS9-209ENST00000448962 2384 ntTSL 212.43□□□□□ -0.421e-19■■□□□ 12
SUB1P53999 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC12.02□□□□□ -0.491e-19■■□□□ 12
SUB1P53999 RPS9-202ENST00000391751 510 ntTSL 1 (best) BASIC10.5□□□□□ -0.731e-19■■□□□ 12
SUB1P53999 RPS9-206ENST00000436445 752 ntTSL 210.45□□□□□ -0.741e-19■■□□□ 12
SUB1P53999 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.741e-19■■□□□ 12
SUB1P53999 RPS9-208ENST00000445961 944 ntTSL 510.44□□□□□ -0.741e-19■■□□□ 12
SUB1P53999 RPS9-212ENST00000495002 956 ntTSL 1 (best)10.14□□□□□ -0.791e-19■■□□□ 12
SUB1P53999 RPS9-211ENST00000484121 897 ntTSL 29.99□□□□□ -0.811e-19■■□□□ 12
SUB1P53999 RPS9-213ENST00000626547 476 ntTSL 2 BASIC9.66□□□□□ -0.861e-19■■□□□ 12
SUB1P53999 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC18.29■□□□□ 0.528e-11■■□□□ 12
SUB1P53999 PPP1CC-211ENST00000620030 582 ntTSL 217.47■□□□□ 0.398e-11■■□□□ 12
SUB1P53999 GMPR-204ENST00000544145 750 ntTSL 36.05□□□□□ -1.444e-8■■□□□ 12
SUB1P53999 DLAT-201ENST00000280346 4458 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.882e-6■■□□□ 12
SUB1P53999 DLAT-202ENST00000393051 3517 ntTSL 5 BASIC9.39□□□□□ -0.912e-6■■□□□ 12
SUB1P53999 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.181e-21■■□□□ 12
SUB1P53999 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.211e-21■■□□□ 12
SUB1P53999 RPL8-209ENST00000529920 876 ntTSL 213.15□□□□□ -0.31e-21■■□□□ 12
SUB1P53999 RPL8-206ENST00000528296 540 ntTSL 313.04□□□□□ -0.321e-21■■□□□ 12
SUB1P53999 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.391e-21■■□□□ 12
SUB1P53999 RPL8-213ENST00000533397 730 ntTSL 212.28□□□□□ -0.441e-21■■□□□ 12
SUB1P53999 RPL8-204ENST00000526668 717 ntTSL 1 (best)12.27□□□□□ -0.451e-21■■□□□ 12
Retrieved 100 of 11,644 protein–RNA pairs in 117.6 ms