RNA–Protein interactions for RNA: ENST00000396858.5

GAPDH-203, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 5 BASIC

Gene GAPDH, Length 1,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-203ENST00000396858 NISCHQ9Y2I1 1504 aa33.11■■■□□ 2.89
GAPDH-203ENST00000396858 CCDC180Q9P1Z9 1646 aa29.17■■■□□ 2.26
GAPDH-203ENST00000396858 ABCC9O60706 1549 aa27.92■■■□□ 2.06
GAPDH-203ENST00000396858 ZCCHC6Q5VYS8 1495 aaKnown RBP27.79■■■□□ 2.04
GAPDH-203ENST00000396858 DCAF1Q9Y4B6 1507 aa27.39■■□□□ 1.98
GAPDH-203ENST00000396858 DCAF8L2P0C7V8 631 aa27.31■■□□□ 1.96
GAPDH-203ENST00000396858 MYO15BQ96JP2 1530 aa27.22■■□□□ 1.95
GAPDH-203ENST00000396858 NACADO15069 1562 aa27.21■■□□□ 1.95
GAPDH-203ENST00000396858 RB1CC1Q8TDY2 1594 aa27.1■■□□□ 1.93
GAPDH-203ENST00000396858 SCRIBQ14160 1630 aa26.76■■□□□ 1.87
GAPDH-203ENST00000396858 SHROOM4Q9ULL8 1493 aa26.67■■□□□ 1.86
GAPDH-203ENST00000396858 UNC13AQ9UPW8 1703 aa26.56■■□□□ 1.84
GAPDH-203ENST00000396858 BICRAQ9NZM4 1560 aa26.3■■□□□ 1.8
GAPDH-203ENST00000396858 PABPN1Q86U42 306 aaKnown RBP eCLIP26.15■■□□□ 1.78
GAPDH-203ENST00000396858 CECR2Q9BXF3 1484 aa25.76■■□□□ 1.71
GAPDH-203ENST00000396858 BAZ1AQ9NRL2 1556 aaPredicted RBP25.63■■□□□ 1.69
GAPDH-203ENST00000396858 SMARCA4P51532 1647 aa25.6■■□□□ 1.69
GAPDH-203ENST00000396858 MROH2BQ7Z745 1585 aa25.57■■□□□ 1.68
GAPDH-203ENST00000396858 EIF4G1Q04637 1599 aaKnown RBP25.55■■□□□ 1.68
GAPDH-203ENST00000396858 RSF1Q96T23 1441 aaPredicted RBP25.48■■□□□ 1.67
GAPDH-203ENST00000396858 WIZO95785 1651 aa25.35■■□□□ 1.65
GAPDH-203ENST00000396858 SUPT5HO00267 1087 aaKnown RBP25.33■■□□□ 1.65
GAPDH-203ENST00000396858 PEG3Q9GZU2 1588 aa25.29■■□□□ 1.64
GAPDH-203ENST00000396858 CC2D2AQ9P2K1 1620 aa25.27■■□□□ 1.64
GAPDH-203ENST00000396858 SMARCA2P51531 1590 aa25.24■■□□□ 1.63
GAPDH-203ENST00000396858 ATAD2BQ9ULI0 1458 aa25.24■■□□□ 1.63
GAPDH-203ENST00000396858 TOP2AP11388 1531 aaKnown RBP25.12■■□□□ 1.61
GAPDH-203ENST00000396858 BAZ1BQ9UIG0 1483 aaKnown RBP25.1■■□□□ 1.61
GAPDH-203ENST00000396858 HMGXB3Q12766 1538 aa25.09■■□□□ 1.61
GAPDH-203ENST00000396858 NCAPD3P42695 1498 aa25.07■■□□□ 1.6
GAPDH-203ENST00000396858 DNAJC5BQ9UF47 199 aa24.92■■□□□ 1.58
GAPDH-203ENST00000396858 CCDC88BA6NC98 1476 aa24.77■■□□□ 1.56
GAPDH-203ENST00000396858 CFTRP13569 1480 aa24.4■■□□□ 1.5
GAPDH-203ENST00000396858 NESP48681 1621 aa24.38■■□□□ 1.49
GAPDH-203ENST00000396858 CADPSQ9ULU8 1353 aa24.38■■□□□ 1.49
GAPDH-203ENST00000396858 LAMC3Q9Y6N6 1575 aa24.35■■□□□ 1.49
GAPDH-203ENST00000396858 PRDM2Q13029 1718 aa24.35■■□□□ 1.49
GAPDH-203ENST00000396858 FANCD2Q9BXW9 1451 aa24.17■■□□□ 1.46
GAPDH-203ENST00000396858 ABCC8Q09428 1581 aa24.16■■□□□ 1.46
GAPDH-203ENST00000396858 KIF21AQ7Z4S6 1674 aa24.13■■□□□ 1.45
GAPDH-203ENST00000396858 PDS5BQ9NTI5 1447 aa24.11■■□□□ 1.45
GAPDH-203ENST00000396858 CEP164Q9UPV0 1460 aa24.09■■□□□ 1.45
GAPDH-203ENST00000396858 WRNQ14191 1432 aaPredicted RBP eCLIP24.01■■□□□ 1.43
GAPDH-203ENST00000396858 SYNJ1O43426 1573 aa24■■□□□ 1.43
GAPDH-203ENST00000396858 CHIC1Q5VXU3 224 aa24■■□□□ 1.43
GAPDH-203ENST00000396858 ERCC6Q03468 1493 aa24■■□□□ 1.43
GAPDH-203ENST00000396858 CUX1P39880 1505 aa23.96■■□□□ 1.43
GAPDH-203ENST00000396858 BIVM-ERCC5R4GMW8 1640 aa23.92■■□□□ 1.42
GAPDH-203ENST00000396858 TOP2BQ02880 1626 aa23.92■■□□□ 1.42
GAPDH-203ENST00000396858 URB2Q14146 1524 aaKnown RBP23.91■■□□□ 1.42
GAPDH-203ENST00000396858 MRC2Q9UBG0 1479 aa23.91■■□□□ 1.42
GAPDH-203ENST00000396858 DNMBPQ6XZF7 1577 aa23.91■■□□□ 1.42
GAPDH-203ENST00000396858 THOC2Q8NI27 1593 aaKnown RBP23.9■■□□□ 1.42
GAPDH-203ENST00000396858 TOPBP1Q92547 1522 aa23.87■■□□□ 1.41
GAPDH-203ENST00000396858 TRIM41Q8WV44 630 aa23.82■■□□□ 1.4
GAPDH-203ENST00000396858 WDR62O43379 1518 aa23.82■■□□□ 1.4
GAPDH-203ENST00000396858 FGD5Q6ZNL6 1462 aa23.77■■□□□ 1.4
GAPDH-203ENST00000396858 AEBP2Q6ZN18 517 aaPredicted RBP23.75■■□□□ 1.39
GAPDH-203ENST00000396858 POLA1P09884 1462 aaPredicted RBP23.72■■□□□ 1.39
GAPDH-203ENST00000396858 RAD54L2Q9Y4B4 1467 aa23.62■■□□□ 1.37
GAPDH-203ENST00000396858 WDR97A6NE52 1622 aa23.59■■□□□ 1.37
GAPDH-203ENST00000396858 CUX2O14529 1486 aa23.59■■□□□ 1.37
GAPDH-203ENST00000396858 TARBP1Q13395 1621 aaKnown RBP23.56■■□□□ 1.36
GAPDH-203ENST00000396858 SOGA1O94964 1423 aa23.56■■□□□ 1.36
GAPDH-203ENST00000396858 ABCA10Q8WWZ4 1543 aa23.54■■□□□ 1.36
GAPDH-203ENST00000396858 IFT140Q96RY7 1462 aa23.52■■□□□ 1.36
GAPDH-203ENST00000396858 RUSC2Q8N2Y8 1516 aa23.49■■□□□ 1.35
GAPDH-203ENST00000396858 ABCA5Q8WWZ7 1642 aa23.44■■□□□ 1.34
GAPDH-203ENST00000396858 KIF27Q86VH2 1401 aa23.43■■□□□ 1.34
GAPDH-203ENST00000396858 EEA1Q15075 1411 aa23.42■■□□□ 1.34
GAPDH-203ENST00000396858 FAM9AQ8IZU1 332 aaPredicted RBP23.41■■□□□ 1.34
GAPDH-203ENST00000396858 ZNF608Q9ULD9 1512 aaPredicted RBP23.41■■□□□ 1.34
GAPDH-203ENST00000396858 EIF4G3O43432 1585 aaKnown RBP23.4■■□□□ 1.34
GAPDH-203ENST00000396858 TDRD9Q8NDG6 1382 aaKnown RBP23.38■■□□□ 1.33
GAPDH-203ENST00000396858 PBRM1Q86U86 1689 aa23.33■■□□□ 1.33
GAPDH-203ENST00000396858 GAPVD1Q14C86 1478 aa23.33■■□□□ 1.33
GAPDH-203ENST00000396858 AQRO60306 1485 aaKnown RBP eCLIP23.32■■□□□ 1.321e-12■■■■■ 32
GAPDH-203ENST00000396858 ERICH3Q5RHP9 1530 aa23.25■■□□□ 1.31
GAPDH-203ENST00000396858 GRIN2BQ13224 1484 aa23.24■■□□□ 1.31
GAPDH-203ENST00000396858 CSRNP3Q8WYN3 585 aa23.22■■□□□ 1.31
GAPDH-203ENST00000396858 CUL7Q14999 1698 aa23.22■■□□□ 1.31
GAPDH-203ENST00000396858 IGF1RP08069 1367 aa23.21■■□□□ 1.31
GAPDH-203ENST00000396858 KIF21BO75037 1637 aa23.21■■□□□ 1.31
GAPDH-203ENST00000396858 ADAMTS12P58397 1594 aa23.2■■□□□ 1.3
GAPDH-203ENST00000396858 SNAPC4Q5SXM2 1469 aa23.18■■□□□ 1.3
GAPDH-203ENST00000396858 PRXQ9BXM0 1461 aa23.17■■□□□ 1.3
GAPDH-203ENST00000396858 RAPGEF2Q9Y4G8 1499 aa23.12■■□□□ 1.29
GAPDH-203ENST00000396858 GOLGA3Q08378 1498 aa23.11■■□□□ 1.29
GAPDH-203ENST00000396858 MAGI1Q96QZ7 1491 aaPredicted RBP23.11■■□□□ 1.29
GAPDH-203ENST00000396858 EHMT2Q96KQ7 1210 aa23.11■■□□□ 1.29
GAPDH-203ENST00000396858 CARMIL1Q5VZK9 1371 aa23.11■■□□□ 1.29
GAPDH-203ENST00000396858 FHAD1B1AJZ9 1412 aa23.08■■□□□ 1.28
GAPDH-203ENST00000396858 LOC105371045A0A1W2PR82 267 aa23.02■■□□□ 1.28
GAPDH-203ENST00000396858 SYNJ2O15056 1496 aa23.01■■□□□ 1.27
GAPDH-203ENST00000396858 GRIN2AQ12879 1464 aa22.98■■□□□ 1.27
GAPDH-203ENST00000396858 CHD1O14646 1710 aa22.95■■□□□ 1.26
GAPDH-203ENST00000396858 CTTNBP2Q8WZ74 1663 aa22.9■■□□□ 1.26
GAPDH-203ENST00000396858 UBTFP17480 764 aaKnown RBP22.89■■□□□ 1.25
GAPDH-203ENST00000396858 CEP170Q5SW79 1584 aa22.88■■□□□ 1.25
GAPDH-203ENST00000396858 TNIKQ9UKE5 1360 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms