RNA–Protein interactions for RNA: ENST00000396856.5

GAPDH-202, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 5 BASIC

Gene GAPDH, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-202ENST00000396856 NISCHQ9Y2I1 1504 aa29.86■■■□□ 2.37
GAPDH-202ENST00000396856 ABCC9O60706 1549 aa27.59■■■□□ 2.01
GAPDH-202ENST00000396856 CCDC180Q9P1Z9 1646 aa26.91■■□□□ 1.9
GAPDH-202ENST00000396856 DNAJC5BQ9UF47 199 aa26.66■■□□□ 1.86
GAPDH-202ENST00000396856 RB1CC1Q8TDY2 1594 aa25.94■■□□□ 1.74
GAPDH-202ENST00000396856 NACADO15069 1562 aa25.65■■□□□ 1.7
GAPDH-202ENST00000396856 PABPN1Q86U42 306 aaKnown RBP eCLIP25.64■■□□□ 1.7
GAPDH-202ENST00000396856 UNC13AQ9UPW8 1703 aa25.37■■□□□ 1.65
GAPDH-202ENST00000396856 DCAF8L2P0C7V8 631 aa25.34■■□□□ 1.65
GAPDH-202ENST00000396856 BICRAQ9NZM4 1560 aa25.33■■□□□ 1.65
GAPDH-202ENST00000396856 MYO15BQ96JP2 1530 aa25.14■■□□□ 1.62
GAPDH-202ENST00000396856 CECR2Q9BXF3 1484 aa24.93■■□□□ 1.58
GAPDH-202ENST00000396856 CC2D2AQ9P2K1 1620 aa24.9■■□□□ 1.58
GAPDH-202ENST00000396856 DNAJC5Q9H3Z4 198 aa24.89■■□□□ 1.58
GAPDH-202ENST00000396856 SHROOM4Q9ULL8 1493 aa24.83■■□□□ 1.57
GAPDH-202ENST00000396856 ZCCHC6Q5VYS8 1495 aaKnown RBP24.8■■□□□ 1.56
GAPDH-202ENST00000396856 DCAF1Q9Y4B6 1507 aa24.72■■□□□ 1.55
GAPDH-202ENST00000396856 EIF4G1Q04637 1599 aaKnown RBP24.69■■□□□ 1.54
GAPDH-202ENST00000396856 SCRIBQ14160 1630 aa24.46■■□□□ 1.51
GAPDH-202ENST00000396856 CUX2O14529 1486 aa24.05■■□□□ 1.44
GAPDH-202ENST00000396856 ERCC6Q03468 1493 aa23.79■■□□□ 1.4
GAPDH-202ENST00000396856 NCAPD3P42695 1498 aa23.76■■□□□ 1.39
GAPDH-202ENST00000396856 ATAD2BQ9ULI0 1458 aa23.57■■□□□ 1.36
GAPDH-202ENST00000396856 NESP48681 1621 aa23.56■■□□□ 1.36
GAPDH-202ENST00000396856 HMGXB3Q12766 1538 aa23.44■■□□□ 1.34
GAPDH-202ENST00000396856 THOC2Q8NI27 1593 aaKnown RBP23.41■■□□□ 1.34
GAPDH-202ENST00000396856 SMARCA2P51531 1590 aa23.4■■□□□ 1.34
GAPDH-202ENST00000396856 TRIM41Q8WV44 630 aa23.38■■□□□ 1.33
GAPDH-202ENST00000396856 SMARCA4P51532 1647 aa23.32■■□□□ 1.32
GAPDH-202ENST00000396856 LAMC3Q9Y6N6 1575 aa23.23■■□□□ 1.31
GAPDH-202ENST00000396856 BAZ1BQ9UIG0 1483 aaKnown RBP23.22■■□□□ 1.31
GAPDH-202ENST00000396856 BAZ1AQ9NRL2 1556 aaPredicted RBP23.18■■□□□ 1.3
GAPDH-202ENST00000396856 PEG3Q9GZU2 1588 aa23.17■■□□□ 1.3
GAPDH-202ENST00000396856 KIF21AQ7Z4S6 1674 aa23.16■■□□□ 1.3
GAPDH-202ENST00000396856 PDS5BQ9NTI5 1447 aa23.13■■□□□ 1.29
GAPDH-202ENST00000396856 MROH2BQ7Z745 1585 aa22.98■■□□□ 1.27
GAPDH-202ENST00000396856 CADPSQ9ULU8 1353 aa22.98■■□□□ 1.27
GAPDH-202ENST00000396856 MRC2Q9UBG0 1479 aa22.96■■□□□ 1.27
GAPDH-202ENST00000396856 WDR62O43379 1518 aa22.96■■□□□ 1.27
GAPDH-202ENST00000396856 OSCARQ8IYS5 282 aa22.88■■□□□ 1.25
GAPDH-202ENST00000396856 CEP164Q9UPV0 1460 aa22.71■■□□□ 1.23
GAPDH-202ENST00000396856 WIZO95785 1651 aa22.69■■□□□ 1.22
GAPDH-202ENST00000396856 FANCD2Q9BXW9 1451 aa22.67■■□□□ 1.22
GAPDH-202ENST00000396856 RSF1Q96T23 1441 aaPredicted RBP22.61■■□□□ 1.21
GAPDH-202ENST00000396856 RIMBP3CA6NJZ7 1639 aa22.6■■□□□ 1.21
GAPDH-202ENST00000396856 RIMBP3BA6NNM3 1639 aa22.6■■□□□ 1.21
GAPDH-202ENST00000396856 RIMBP3Q9UFD9 1639 aa22.6■■□□□ 1.21
GAPDH-202ENST00000396856 CFTRP13569 1480 aa22.6■■□□□ 1.21
GAPDH-202ENST00000396856 URB2Q14146 1524 aaKnown RBP22.57■■□□□ 1.2
GAPDH-202ENST00000396856 ARHGEF11O15085 1522 aa22.48■■□□□ 1.19
GAPDH-202ENST00000396856 TOP2AP11388 1531 aaKnown RBP22.48■■□□□ 1.19
GAPDH-202ENST00000396856 ZNF608Q9ULD9 1512 aaPredicted RBP22.4■■□□□ 1.18
GAPDH-202ENST00000396856 CYB5RLQ6IPT4 315 aa22.38■■□□□ 1.17
GAPDH-202ENST00000396856 IFT140Q96RY7 1462 aa22.33■■□□□ 1.16
GAPDH-202ENST00000396856 TRHP20396 242 aaPredicted RBP22.26■■□□□ 1.15
GAPDH-202ENST00000396856 ARAP1Q96P48 1450 aa22.23■■□□□ 1.15
GAPDH-202ENST00000396856 CCDC88BA6NC98 1476 aa22.2■■□□□ 1.14
GAPDH-202ENST00000396856 TOPBP1Q92547 1522 aa22.19■■□□□ 1.14
GAPDH-202ENST00000396856 PRDM2Q13029 1718 aa22.16■■□□□ 1.14
GAPDH-202ENST00000396856 EIF4G3O43432 1585 aaKnown RBP22.16■■□□□ 1.14
GAPDH-202ENST00000396856 AQRO60306 1485 aaKnown RBP eCLIP22.11■■□□□ 1.132e-13■■■■■ 33.3
GAPDH-202ENST00000396856 CHD1O14646 1710 aa22.09■■□□□ 1.13
GAPDH-202ENST00000396856 TARBP1Q13395 1621 aaKnown RBP22.06■■□□□ 1.12
GAPDH-202ENST00000396856 ABCC8Q09428 1581 aa22.06■■□□□ 1.12
GAPDH-202ENST00000396856 AEBP2Q6ZN18 517 aaPredicted RBP22.05■■□□□ 1.12
GAPDH-202ENST00000396856 FBLN2P98095 1184 aa22.01■■□□□ 1.11
GAPDH-202ENST00000396856 DNMBPQ6XZF7 1577 aa22■■□□□ 1.11
GAPDH-202ENST00000396856 POLA1P09884 1462 aaPredicted RBP21.93■■□□□ 1.1
GAPDH-202ENST00000396856 CLASP1Q7Z460 1538 aa21.91■■□□□ 1.1
GAPDH-202ENST00000396856 TDRD9Q8NDG6 1382 aaKnown RBP21.87■■□□□ 1.09
GAPDH-202ENST00000396856 RAD54L2Q9Y4B4 1467 aa21.87■■□□□ 1.09
GAPDH-202ENST00000396856 SOGA1O94964 1423 aa21.81■■□□□ 1.08
GAPDH-202ENST00000396856 SNAPC4Q5SXM2 1469 aa21.81■■□□□ 1.08
GAPDH-202ENST00000396856 CHMP7Q8WUX9 453 aaPredicted RBP21.78■■□□□ 1.08
GAPDH-202ENST00000396856 SYNJ1O43426 1573 aa21.75■■□□□ 1.07
GAPDH-202ENST00000396856 SUPT5HO00267 1087 aaKnown RBP21.74■■□□□ 1.07
GAPDH-202ENST00000396856 MAGI1Q96QZ7 1491 aaPredicted RBP21.73■■□□□ 1.07
GAPDH-202ENST00000396856 WDR97A6NE52 1622 aa21.72■■□□□ 1.07
GAPDH-202ENST00000396856 GAPVD1Q14C86 1478 aa21.71■■□□□ 1.07
GAPDH-202ENST00000396856 SYNJ2O15056 1496 aa21.68■■□□□ 1.06
GAPDH-202ENST00000396856 GRIN2BQ13224 1484 aa21.67■■□□□ 1.06
GAPDH-202ENST00000396856 FGD5Q6ZNL6 1462 aa21.67■■□□□ 1.06
GAPDH-202ENST00000396856 CUX1P39880 1505 aa21.58■■□□□ 1.04
GAPDH-202ENST00000396856 ERCC6L2Q5T890 1561 aa21.55■■□□□ 1.04
GAPDH-202ENST00000396856 PBRM1Q86U86 1689 aa21.47■■□□□ 1.03
GAPDH-202ENST00000396856 ABCA10Q8WWZ4 1543 aa21.42■■□□□ 1.02
GAPDH-202ENST00000396856 ABCA5Q8WWZ7 1642 aa21.41■■□□□ 1.02
GAPDH-202ENST00000396856 CEP170Q5SW79 1584 aa21.4■■□□□ 1.02
GAPDH-202ENST00000396856 GRIN2AQ12879 1464 aa21.4■■□□□ 1.02
GAPDH-202ENST00000396856 KIF13AQ9H1H9 1805 aa21.4■■□□□ 1.02
GAPDH-202ENST00000396856 NUP160Q12769 1436 aa21.39■■□□□ 1.02
GAPDH-202ENST00000396856 SHROOM2Q13796 1616 aa21.35■■□□□ 1.01
GAPDH-202ENST00000396856 WRNQ14191 1432 aaPredicted RBP eCLIP21.35■■□□□ 1.01
GAPDH-202ENST00000396856 TOP2BQ02880 1626 aa21.32■■□□□ 1
GAPDH-202ENST00000396856 BIVM-ERCC5R4GMW8 1640 aa21.31■■□□□ 1
GAPDH-202ENST00000396856 KDM4FA0A1W2PPD8 638 aa21.31■■□□□ 1
GAPDH-202ENST00000396856 ILDR1Q86SU0 546 aaPredicted RBP21.29■■□□□ 1
GAPDH-202ENST00000396856 ADAMTS12P58397 1594 aa21.27■□□□□ 0.99
GAPDH-202ENST00000396856 ABCC10Q5T3U5 1492 aa21.25■□□□□ 0.99
GAPDH-202ENST00000396856 FAM69CQ0P6D2 419 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms