RNA–Protein interactions for RNA: ENST00000377811.3

NDUFB11-202, Transcript of NADH:ubiquinone oxidoreductase subunit B11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDUFB11, Length 1,388 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFB11-202ENST00000377811 NISCHQ9Y2I1 1504 aa33.05■■■□□ 2.88
NDUFB11-202ENST00000377811 ABCC9O60706 1549 aa31.05■■■□□ 2.56
NDUFB11-202ENST00000377811 DNAJC5BQ9UF47 199 aa30.1■■■□□ 2.41
NDUFB11-202ENST00000377811 CCDC180Q9P1Z9 1646 aa30■■■□□ 2.39
NDUFB11-202ENST00000377811 RB1CC1Q8TDY2 1594 aa29.01■■■□□ 2.23
NDUFB11-202ENST00000377811 PABPN1Q86U42 306 aaKnown RBP eCLIP28.78■■■□□ 2.2
NDUFB11-202ENST00000377811 NACADO15069 1562 aa28.57■■■□□ 2.16
NDUFB11-202ENST00000377811 UNC13AQ9UPW8 1703 aa28.53■■■□□ 2.16
NDUFB11-202ENST00000377811 BICRAQ9NZM4 1560 aa28.37■■■□□ 2.13
NDUFB11-202ENST00000377811 DCAF8L2P0C7V8 631 aa28.28■■■□□ 2.12
NDUFB11-202ENST00000377811 DNAJC5Q9H3Z4 198 aa28.17■■■□□ 2.1
NDUFB11-202ENST00000377811 CECR2Q9BXF3 1484 aa28.01■■■□□ 2.08
NDUFB11-202ENST00000377811 CC2D2AQ9P2K1 1620 aa27.99■■■□□ 2.07
NDUFB11-202ENST00000377811 MYO15BQ96JP2 1530 aa27.83■■■□□ 2.05
NDUFB11-202ENST00000377811 EIF4G1Q04637 1599 aaKnown RBP27.67■■■□□ 2.02
NDUFB11-202ENST00000377811 SHROOM4Q9ULL8 1493 aa27.65■■■□□ 2.02
NDUFB11-202ENST00000377811 SCRIBQ14160 1630 aa27.39■■□□□ 1.98
NDUFB11-202ENST00000377811 ZCCHC6Q5VYS8 1495 aaKnown RBP27.19■■□□□ 1.94
NDUFB11-202ENST00000377811 DCAF1Q9Y4B6 1507 aa27.16■■□□□ 1.94
NDUFB11-202ENST00000377811 CUX2O14529 1486 aa27.03■■□□□ 1.92
NDUFB11-202ENST00000377811 ERCC6Q03468 1493 aa26.76■■□□□ 1.87
NDUFB11-202ENST00000377811 TRIM41Q8WV44 630 aa26.57■■□□□ 1.84
NDUFB11-202ENST00000377811 NESP48681 1621 aa26.46■■□□□ 1.83
NDUFB11-202ENST00000377811 NCAPD3P42695 1498 aa26.43■■□□□ 1.82
NDUFB11-202ENST00000377811 THOC2Q8NI27 1593 aaKnown RBP26.33■■□□□ 1.81
NDUFB11-202ENST00000377811 ATAD2BQ9ULI0 1458 aa26.26■■□□□ 1.79
NDUFB11-202ENST00000377811 HMGXB3Q12766 1538 aa26.13■■□□□ 1.77
NDUFB11-202ENST00000377811 SMARCA2P51531 1590 aa26.11■■□□□ 1.77
NDUFB11-202ENST00000377811 KIF21AQ7Z4S6 1674 aa26.05■■□□□ 1.76
NDUFB11-202ENST00000377811 SMARCA4P51532 1647 aa26■■□□□ 1.75
NDUFB11-202ENST00000377811 LAMC3Q9Y6N6 1575 aa25.96■■□□□ 1.75
NDUFB11-202ENST00000377811 BAZ1BQ9UIG0 1483 aaKnown RBP25.9■■□□□ 1.74
NDUFB11-202ENST00000377811 PDS5BQ9NTI5 1447 aa25.8■■□□□ 1.72
NDUFB11-202ENST00000377811 BAZ1AQ9NRL2 1556 aaPredicted RBP25.78■■□□□ 1.72
NDUFB11-202ENST00000377811 PEG3Q9GZU2 1588 aa25.71■■□□□ 1.71
NDUFB11-202ENST00000377811 MRC2Q9UBG0 1479 aa25.71■■□□□ 1.71
NDUFB11-202ENST00000377811 WDR62O43379 1518 aa25.69■■□□□ 1.7
NDUFB11-202ENST00000377811 OSCARQ8IYS5 282 aa25.63■■□□□ 1.69
NDUFB11-202ENST00000377811 CADPSQ9ULU8 1353 aa25.57■■□□□ 1.68
NDUFB11-202ENST00000377811 RIMBP3CA6NJZ7 1639 aa25.53■■□□□ 1.68
NDUFB11-202ENST00000377811 RIMBP3BA6NNM3 1639 aa25.53■■□□□ 1.68
NDUFB11-202ENST00000377811 RIMBP3Q9UFD9 1639 aa25.53■■□□□ 1.68
NDUFB11-202ENST00000377811 MROH2BQ7Z745 1585 aa25.53■■□□□ 1.68
NDUFB11-202ENST00000377811 CEP164Q9UPV0 1460 aa25.39■■□□□ 1.66
NDUFB11-202ENST00000377811 FANCD2Q9BXW9 1451 aa25.31■■□□□ 1.64
NDUFB11-202ENST00000377811 ARHGEF11O15085 1522 aa25.31■■□□□ 1.64
NDUFB11-202ENST00000377811 URB2Q14146 1524 aaKnown RBP25.24■■□□□ 1.63
NDUFB11-202ENST00000377811 WIZO95785 1651 aa25.18■■□□□ 1.62
NDUFB11-202ENST00000377811 CYB5RLQ6IPT4 315 aa25.17■■□□□ 1.62
NDUFB11-202ENST00000377811 TRHP20396 242 aaPredicted RBP25.14■■□□□ 1.61
NDUFB11-202ENST00000377811 ZNF608Q9ULD9 1512 aaPredicted RBP25.11■■□□□ 1.61
NDUFB11-202ENST00000377811 CFTRP13569 1480 aa25.1■■□□□ 1.61
NDUFB11-202ENST00000377811 AEBP2Q6ZN18 517 aaPredicted RBP25.05■■□□□ 1.6
NDUFB11-202ENST00000377811 ARAP1Q96P48 1450 aa25.04■■□□□ 1.6
NDUFB11-202ENST00000377811 IFT140Q96RY7 1462 aa24.91■■□□□ 1.58
NDUFB11-202ENST00000377811 CHD1O14646 1710 aa24.89■■□□□ 1.57
NDUFB11-202ENST00000377811 EIF4G3O43432 1585 aaKnown RBP24.86■■□□□ 1.57
NDUFB11-202ENST00000377811 PRDM2Q13029 1718 aa24.77■■□□□ 1.56
NDUFB11-202ENST00000377811 RSF1Q96T23 1441 aaPredicted RBP24.75■■□□□ 1.55
NDUFB11-202ENST00000377811 TOPBP1Q92547 1522 aa24.75■■□□□ 1.55
NDUFB11-202ENST00000377811 AQRO60306 1485 aaKnown RBP eCLIP24.73■■□□□ 1.552e-6■□□□□ 9
NDUFB11-202ENST00000377811 TOP2AP11388 1531 aaKnown RBP24.7■■□□□ 1.54
NDUFB11-202ENST00000377811 FBLN2P98095 1184 aa24.67■■□□□ 1.54
NDUFB11-202ENST00000377811 TARBP1Q13395 1621 aaKnown RBP24.63■■□□□ 1.53
NDUFB11-202ENST00000377811 CLASP1Q7Z460 1538 aa24.55■■□□□ 1.52
NDUFB11-202ENST00000377811 DNMBPQ6XZF7 1577 aa24.54■■□□□ 1.52
NDUFB11-202ENST00000377811 CCDC88BA6NC98 1476 aa24.48■■□□□ 1.51
NDUFB11-202ENST00000377811 ABCC8Q09428 1581 aa24.48■■□□□ 1.51
NDUFB11-202ENST00000377811 POLA1P09884 1462 aaPredicted RBP24.45■■□□□ 1.5
NDUFB11-202ENST00000377811 RAD54L2Q9Y4B4 1467 aa24.42■■□□□ 1.5
NDUFB11-202ENST00000377811 SNAPC4Q5SXM2 1469 aa24.41■■□□□ 1.5
NDUFB11-202ENST00000377811 TDRD9Q8NDG6 1382 aaKnown RBP24.41■■□□□ 1.5
NDUFB11-202ENST00000377811 SYNJ1O43426 1573 aa24.35■■□□□ 1.49
NDUFB11-202ENST00000377811 GAPVD1Q14C86 1478 aa24.33■■□□□ 1.48
NDUFB11-202ENST00000377811 CHMP7Q8WUX9 453 aaPredicted RBP24.29■■□□□ 1.48
NDUFB11-202ENST00000377811 SOGA1O94964 1423 aa24.27■■□□□ 1.48
NDUFB11-202ENST00000377811 ILDR1Q86SU0 546 aaPredicted RBP24.25■■□□□ 1.47
NDUFB11-202ENST00000377811 MAGI1Q96QZ7 1491 aaPredicted RBP24.22■■□□□ 1.47
NDUFB11-202ENST00000377811 ERCC6L2Q5T890 1561 aa24.21■■□□□ 1.47
NDUFB11-202ENST00000377811 SYNJ2O15056 1496 aa24.18■■□□□ 1.46
NDUFB11-202ENST00000377811 WDR97A6NE52 1622 aa24.15■■□□□ 1.46
NDUFB11-202ENST00000377811 FGD5Q6ZNL6 1462 aa24.15■■□□□ 1.46
NDUFB11-202ENST00000377811 GRIN2BQ13224 1484 aa24.14■■□□□ 1.46
NDUFB11-202ENST00000377811 KIF13AQ9H1H9 1805 aa24.14■■□□□ 1.45
NDUFB11-202ENST00000377811 PBRM1Q86U86 1689 aa24.05■■□□□ 1.44
NDUFB11-202ENST00000377811 KDM4FA0A1W2PPD8 638 aa24.03■■□□□ 1.44
NDUFB11-202ENST00000377811 CUX1P39880 1505 aa24.03■■□□□ 1.44
NDUFB11-202ENST00000377811 CEP170Q5SW79 1584 aa23.97■■□□□ 1.43
NDUFB11-202ENST00000377811 ABCA5Q8WWZ7 1642 aa23.89■■□□□ 1.41
NDUFB11-202ENST00000377811 GRIN2AQ12879 1464 aa23.87■■□□□ 1.41
NDUFB11-202ENST00000377811 SHROOM2Q13796 1616 aa23.86■■□□□ 1.41
NDUFB11-202ENST00000377811 NUP160Q12769 1436 aa23.84■■□□□ 1.41
NDUFB11-202ENST00000377811 FAM69CQ0P6D2 419 aa23.8■■□□□ 1.4
NDUFB11-202ENST00000377811 ABCC10Q5T3U5 1492 aa23.79■■□□□ 1.4
NDUFB11-202ENST00000377811 ABCA10Q8WWZ4 1543 aa23.79■■□□□ 1.4
NDUFB11-202ENST00000377811 ADAMTS12P58397 1594 aa23.77■■□□□ 1.4
NDUFB11-202ENST00000377811 KDM6BO15054 1643 aa23.75■■□□□ 1.39
NDUFB11-202ENST00000377811 DIP2BQ9P265 1576 aa23.74■■□□□ 1.39
NDUFB11-202ENST00000377811 PRG4Q92954 1404 aaPredicted RBP23.68■■□□□ 1.38
NDUFB11-202ENST00000377811 TSPOAP1O95153 1857 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms