RNA–Protein interactions for RNA: ENST00000253814.5

NDFIP1-201, Transcript of Nedd4 family interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDFIP1, Length 3,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP1-201ENST00000253814 NISCHQ9Y2I1 1504 aa32.15■■■□□ 2.74
NDFIP1-201ENST00000253814 SUPT5HO00267 1087 aaKnown RBP30.04■■■□□ 2.4
NDFIP1-201ENST00000253814 SHROOM4Q9ULL8 1493 aa29.99■■■□□ 2.39
NDFIP1-201ENST00000253814 DCAF8L2P0C7V8 631 aa29.99■■■□□ 2.39
NDFIP1-201ENST00000253814 PCGF6Q9BYE7 350 aa28.81■■■□□ 2.2
NDFIP1-201ENST00000253814 EHMT2Q96KQ7 1210 aa28.51■■■□□ 2.15
NDFIP1-201ENST00000253814 HRCP23327 699 aa28.19■■■□□ 2.1
NDFIP1-201ENST00000253814 CHIC1Q5VXU3 224 aa28.12■■■□□ 2.09
NDFIP1-201ENST00000253814 FAM9AQ8IZU1 332 aaPredicted RBP28.1■■■□□ 2.09
NDFIP1-201ENST00000253814 PPARGC1BQ86YN6 1023 aaKnown RBP28.05■■■□□ 2.08
NDFIP1-201ENST00000253814 LOC105371045A0A1W2PR82 267 aa27.95■■■□□ 2.06
NDFIP1-201ENST00000253814 TTBK1Q5TCY1 1321 aaPredicted RBP27.61■■■□□ 2.01
NDFIP1-201ENST00000253814 TRIM41Q8WV44 630 aa27.6■■■□□ 2.01
NDFIP1-201ENST00000253814 TRIM26Q12899 539 aaPredicted RBP27.51■■□□□ 1.99
NDFIP1-201ENST00000253814 ZEB1P37275 1124 aaPredicted RBP27.33■■□□□ 1.97
NDFIP1-201ENST00000253814 MYO15BQ96JP2 1530 aa27.24■■□□□ 1.95
NDFIP1-201ENST00000253814 CCER1Q8TC90 406 aaPredicted RBP27.22■■□□□ 1.95
NDFIP1-201ENST00000253814 ZCCHC6Q5VYS8 1495 aaKnown RBP26.97■■□□□ 1.91
NDFIP1-201ENST00000253814 PELP1Q8IZL8 1130 aaKnown RBP26.86■■□□□ 1.89
NDFIP1-201ENST00000253814 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.84■■□□□ 1.89
NDFIP1-201ENST00000253814 CENPBP07199 599 aaPredicted RBP26.82■■□□□ 1.88
NDFIP1-201ENST00000253814 RANGAP1P46060 587 aaPredicted RBP26.81■■□□□ 1.88
NDFIP1-201ENST00000253814 YTHDC1Q96MU7 727 aaKnown RBP26.79■■□□□ 1.88
NDFIP1-201ENST00000253814 UBTFP17480 764 aaKnown RBP26.71■■□□□ 1.87
NDFIP1-201ENST00000253814 APLP2Q06481 763 aa26.65■■□□□ 1.86
NDFIP1-201ENST00000253814 DCAF1Q9Y4B6 1507 aa26.63■■□□□ 1.85
NDFIP1-201ENST00000253814 DIEXFQ68CQ4 756 aaKnown RBP26.44■■□□□ 1.82
NDFIP1-201ENST00000253814 HNRNPUL2Q1KMD3 747 aaKnown RBP26.35■■□□□ 1.81
NDFIP1-201ENST00000253814 GTF3C3Q9Y5Q9 886 aa26.3■■□□□ 1.8
NDFIP1-201ENST00000253814 SCAF1Q9H7N4 1312 aaKnown RBP26.3■■□□□ 1.8
NDFIP1-201ENST00000253814 CCDC180Q9P1Z9 1646 aa26.24■■□□□ 1.79
NDFIP1-201ENST00000253814 ACIN1Q9UKV3 1341 aaKnown RBP26.15■■□□□ 1.78
NDFIP1-201ENST00000253814 SCRIBQ14160 1630 aa26.09■■□□□ 1.77
NDFIP1-201ENST00000253814 ABCC9O60706 1549 aa26.07■■□□□ 1.76
NDFIP1-201ENST00000253814 NEUROD1Q13562 356 aa26.07■■□□□ 1.76
NDFIP1-201ENST00000253814 RSF1Q96T23 1441 aaPredicted RBP25.95■■□□□ 1.74
NDFIP1-201ENST00000253814 ITGAEP38570 1179 aa25.94■■□□□ 1.74
NDFIP1-201ENST00000253814 ATP1B4Q9UN42 357 aaPredicted RBP25.87■■□□□ 1.73
NDFIP1-201ENST00000253814 ZNF316A6NFI3 1004 aaPredicted RBP25.86■■□□□ 1.73
NDFIP1-201ENST00000253814 MYT1Q01538 1121 aa25.76■■□□□ 1.71
NDFIP1-201ENST00000253814 PABPN1Q86U42 306 aaKnown RBP eCLIP25.73■■□□□ 1.71
NDFIP1-201ENST00000253814 CSRNP3Q8WYN3 585 aa25.72■■□□□ 1.71
NDFIP1-201ENST00000253814 RB1CC1Q8TDY2 1594 aa25.55■■□□□ 1.68
NDFIP1-201ENST00000253814 MIER1Q8N108 512 aa25.52■■□□□ 1.68
NDFIP1-201ENST00000253814 CECR2Q9BXF3 1484 aa25.48■■□□□ 1.67
NDFIP1-201ENST00000253814 NEFLP07196 543 aa25.48■■□□□ 1.67
NDFIP1-201ENST00000253814 BCANQ96GW7 911 aa25.45■■□□□ 1.66
NDFIP1-201ENST00000253814 CEP162Q5TB80 1403 aa25.36■■□□□ 1.65
NDFIP1-201ENST00000253814 ERICH6Q7L0X2 663 aa25.29■■□□□ 1.64
NDFIP1-201ENST00000253814 FAM50AQ14320 339 aaKnown RBP25.22■■□□□ 1.63
NDFIP1-201ENST00000253814 MROH2BQ7Z745 1585 aa25.2■■□□□ 1.62
NDFIP1-201ENST00000253814 SOGA1O94964 1423 aa25.16■■□□□ 1.62
NDFIP1-201ENST00000253814 CNGB1Q14028 1251 aaPredicted RBP25.12■■□□□ 1.61
NDFIP1-201ENST00000253814 TNIKQ9UKE5 1360 aa25.07■■□□□ 1.6
NDFIP1-201ENST00000253814 ABCC8Q09428 1581 aa25.07■■□□□ 1.6
NDFIP1-201ENST00000253814 CLIP1P30622 1438 aa25.06■■□□□ 1.6
NDFIP1-201ENST00000253814 CCDC88BA6NC98 1476 aa25.04■■□□□ 1.6
NDFIP1-201ENST00000253814 P3H3Q8IVL6 736 aa25.02■■□□□ 1.6
NDFIP1-201ENST00000253814 WIZO95785 1651 aa24.98■■□□□ 1.59
NDFIP1-201ENST00000253814 DDX10Q13206 875 aaKnown RBP24.96■■□□□ 1.59
NDFIP1-201ENST00000253814 GOLGA3Q08378 1498 aa24.95■■□□□ 1.59
NDFIP1-201ENST00000253814 FKBP8Q14318 412 aa24.93■■□□□ 1.58
NDFIP1-201ENST00000253814 HIRIP3Q9BW71 556 aaPredicted RBP24.92■■□□□ 1.58
NDFIP1-201ENST00000253814 POLR3GLQ9BT43 218 aa24.91■■□□□ 1.58
NDFIP1-201ENST00000253814 WRNQ14191 1432 aaPredicted RBP eCLIP24.87■■□□□ 1.57
NDFIP1-201ENST00000253814 ANP32CO43423 234 aa24.86■■□□□ 1.57
NDFIP1-201ENST00000253814 NACADO15069 1562 aa24.85■■□□□ 1.57
NDFIP1-201ENST00000253814 EEA1Q15075 1411 aa24.84■■□□□ 1.57
NDFIP1-201ENST00000253814 TRIM52Q96A61 297 aa24.84■■□□□ 1.57
NDFIP1-201ENST00000253814 BAZ1AQ9NRL2 1556 aaPredicted RBP24.81■■□□□ 1.56
NDFIP1-201ENST00000253814 RUSC2Q8N2Y8 1516 aa24.78■■□□□ 1.56
NDFIP1-201ENST00000253814 SUPT16HQ9Y5B9 1047 aaKnown RBP24.73■■□□□ 1.55
NDFIP1-201ENST00000253814 CEP164Q9UPV0 1460 aa24.7■■□□□ 1.54
NDFIP1-201ENST00000253814 CLSPNQ9HAW4 1339 aa24.65■■□□□ 1.54
NDFIP1-201ENST00000253814 KANK4Q5T7N3 995 aaPredicted RBP24.62■■□□□ 1.53
NDFIP1-201ENST00000253814 SIN3AQ96ST3 1273 aa24.58■■□□□ 1.53
NDFIP1-201ENST00000253814 IRX6P78412 446 aaPredicted RBP24.58■■□□□ 1.53
NDFIP1-201ENST00000253814 ARID3CA6NKF2 412 aa24.56■■□□□ 1.52
NDFIP1-201ENST00000253814 VPS8Q8N3P4 1428 aa24.56■■□□□ 1.52
NDFIP1-201ENST00000253814 HNRNPUQ00839 825 aaKnown RBP eCLIP24.55■■□□□ 1.52
NDFIP1-201ENST00000253814 CDK11AQ9UQ88 783 aaPredicted RBP24.54■■□□□ 1.52
NDFIP1-201ENST00000253814 KCNH8Q96L42 1107 aa24.48■■□□□ 1.51
NDFIP1-201ENST00000253814 TONSLQ96HA7 1378 aa24.48■■□□□ 1.51
NDFIP1-201ENST00000253814 ZNF326Q5BKZ1 582 aaKnown RBP24.45■■□□□ 1.51
NDFIP1-201ENST00000253814 TOP2AP11388 1531 aaKnown RBP24.44■■□□□ 1.5
NDFIP1-201ENST00000253814 ANP32EQ9BTT0 268 aa24.39■■□□□ 1.5
NDFIP1-201ENST00000253814 BAZ1BQ9UIG0 1483 aaKnown RBP24.38■■□□□ 1.49
NDFIP1-201ENST00000253814 RAPGEF2Q9Y4G8 1499 aa24.38■■□□□ 1.49
NDFIP1-201ENST00000253814 CHIC2Q9UKJ5 165 aa24.38■■□□□ 1.49
NDFIP1-201ENST00000253814 FAM9BQ8IZU0 186 aa24.38■■□□□ 1.49
NDFIP1-201ENST00000253814 CCNB3Q8WWL7 1395 aa24.36■■□□□ 1.49
NDFIP1-201ENST00000253814 TSHZ2Q9NRE2 1034 aa24.35■■□□□ 1.49
NDFIP1-201ENST00000253814 DHX57Q6P158 1386 aaKnown RBP24.3■■□□□ 1.48
NDFIP1-201ENST00000253814 SENP3-EIF4A1A0A087X0R7 540 aa24.27■■□□□ 1.48
NDFIP1-201ENST00000253814 SMARCA2P51531 1590 aa24.24■■□□□ 1.47
NDFIP1-201ENST00000253814 KIF27Q86VH2 1401 aa24.24■■□□□ 1.47
NDFIP1-201ENST00000253814 SMARCA4P51532 1647 aa24.23■■□□□ 1.47
NDFIP1-201ENST00000253814 RAB3GAP2Q9H2M9 1393 aa24.2■■□□□ 1.46
NDFIP1-201ENST00000253814 RRP7BPQ9NSQ0 103 aa24.2■■□□□ 1.46
NDFIP1-201ENST00000253814 RTL5Q5HYW3 569 aaPredicted RBP24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 113.3 ms