RNA–Protein interactions for RNA: ENST00000474249.5

GAPDH-208, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 5

Gene GAPDH, Length 1,333 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-208ENST00000474249 NISCHQ9Y2I1 1504 aa33.88■■■■□ 3.01
GAPDH-208ENST00000474249 ABCC9O60706 1549 aa30.68■■■□□ 2.5
GAPDH-208ENST00000474249 CCDC180Q9P1Z9 1646 aa30.43■■■□□ 2.46
GAPDH-208ENST00000474249 DNAJC5BQ9UF47 199 aa29.18■■■□□ 2.26
GAPDH-208ENST00000474249 RB1CC1Q8TDY2 1594 aa29.09■■■□□ 2.25
GAPDH-208ENST00000474249 NACADO15069 1562 aa28.87■■■□□ 2.21
GAPDH-208ENST00000474249 DCAF8L2P0C7V8 631 aa28.56■■■□□ 2.16
GAPDH-208ENST00000474249 PABPN1Q86U42 306 aaKnown RBP eCLIP28.56■■■□□ 2.16
GAPDH-208ENST00000474249 MYO15BQ96JP2 1530 aa28.48■■■□□ 2.15
GAPDH-208ENST00000474249 UNC13AQ9UPW8 1703 aa28.45■■■□□ 2.14
GAPDH-208ENST00000474249 BICRAQ9NZM4 1560 aa28.35■■■□□ 2.13
GAPDH-208ENST00000474249 ZCCHC6Q5VYS8 1495 aaKnown RBP28.01■■■□□ 2.07
GAPDH-208ENST00000474249 DCAF1Q9Y4B6 1507 aa28.01■■■□□ 2.07
GAPDH-208ENST00000474249 SHROOM4Q9ULL8 1493 aa27.9■■■□□ 2.06
GAPDH-208ENST00000474249 CC2D2AQ9P2K1 1620 aa27.72■■■□□ 2.03
GAPDH-208ENST00000474249 CECR2Q9BXF3 1484 aa27.68■■■□□ 2.02
GAPDH-208ENST00000474249 SCRIBQ14160 1630 aa27.67■■■□□ 2.02
GAPDH-208ENST00000474249 EIF4G1Q04637 1599 aaKnown RBP27.61■■■□□ 2.01
GAPDH-208ENST00000474249 DNAJC5Q9H3Z4 198 aa26.93■■□□□ 1.9
GAPDH-208ENST00000474249 NCAPD3P42695 1498 aa26.73■■□□□ 1.87
GAPDH-208ENST00000474249 ATAD2BQ9ULI0 1458 aa26.58■■□□□ 1.84
GAPDH-208ENST00000474249 CUX2O14529 1486 aa26.57■■□□□ 1.84
GAPDH-208ENST00000474249 HMGXB3Q12766 1538 aa26.44■■□□□ 1.82
GAPDH-208ENST00000474249 ERCC6Q03468 1493 aa26.43■■□□□ 1.82
GAPDH-208ENST00000474249 SMARCA4P51532 1647 aa26.43■■□□□ 1.82
GAPDH-208ENST00000474249 SMARCA2P51531 1590 aa26.42■■□□□ 1.82
GAPDH-208ENST00000474249 NESP48681 1621 aa26.33■■□□□ 1.81
GAPDH-208ENST00000474249 PEG3Q9GZU2 1588 aa26.26■■□□□ 1.79
GAPDH-208ENST00000474249 BAZ1AQ9NRL2 1556 aaPredicted RBP26.26■■□□□ 1.79
GAPDH-208ENST00000474249 BAZ1BQ9UIG0 1483 aaKnown RBP26.22■■□□□ 1.79
GAPDH-208ENST00000474249 MROH2BQ7Z745 1585 aa26.1■■□□□ 1.77
GAPDH-208ENST00000474249 THOC2Q8NI27 1593 aaKnown RBP26.1■■□□□ 1.77
GAPDH-208ENST00000474249 LAMC3Q9Y6N6 1575 aa26.07■■□□□ 1.76
GAPDH-208ENST00000474249 PDS5BQ9NTI5 1447 aa25.93■■□□□ 1.74
GAPDH-208ENST00000474249 KIF21AQ7Z4S6 1674 aa25.91■■□□□ 1.74
GAPDH-208ENST00000474249 CADPSQ9ULU8 1353 aa25.87■■□□□ 1.73
GAPDH-208ENST00000474249 WIZO95785 1651 aa25.72■■□□□ 1.71
GAPDH-208ENST00000474249 MRC2Q9UBG0 1479 aa25.71■■□□□ 1.71
GAPDH-208ENST00000474249 WDR62O43379 1518 aa25.69■■□□□ 1.7
GAPDH-208ENST00000474249 CFTRP13569 1480 aa25.54■■□□□ 1.68
GAPDH-208ENST00000474249 FANCD2Q9BXW9 1451 aa25.53■■□□□ 1.68
GAPDH-208ENST00000474249 CEP164Q9UPV0 1460 aa25.53■■□□□ 1.68
GAPDH-208ENST00000474249 RSF1Q96T23 1441 aaPredicted RBP25.49■■□□□ 1.67
GAPDH-208ENST00000474249 TRIM41Q8WV44 630 aa25.46■■□□□ 1.67
GAPDH-208ENST00000474249 TOP2AP11388 1531 aaKnown RBP25.37■■□□□ 1.65
GAPDH-208ENST00000474249 URB2Q14146 1524 aaKnown RBP25.37■■□□□ 1.65
GAPDH-208ENST00000474249 OSCARQ8IYS5 282 aa25.33■■□□□ 1.64
GAPDH-208ENST00000474249 CCDC88BA6NC98 1476 aa25.15■■□□□ 1.62
GAPDH-208ENST00000474249 PRDM2Q13029 1718 aa25.13■■□□□ 1.61
GAPDH-208ENST00000474249 ZNF608Q9ULD9 1512 aaPredicted RBP25.1■■□□□ 1.61
GAPDH-208ENST00000474249 IFT140Q96RY7 1462 aa25.07■■□□□ 1.6
GAPDH-208ENST00000474249 TOPBP1Q92547 1522 aa25.03■■□□□ 1.6
GAPDH-208ENST00000474249 RIMBP3CA6NJZ7 1639 aa24.99■■□□□ 1.59
GAPDH-208ENST00000474249 RIMBP3BA6NNM3 1639 aa24.99■■□□□ 1.59
GAPDH-208ENST00000474249 RIMBP3Q9UFD9 1639 aa24.99■■□□□ 1.59
GAPDH-208ENST00000474249 ABCC8Q09428 1581 aa24.94■■□□□ 1.58
GAPDH-208ENST00000474249 ARHGEF11O15085 1522 aa24.9■■□□□ 1.58
GAPDH-208ENST00000474249 DNMBPQ6XZF7 1577 aa24.88■■□□□ 1.57
GAPDH-208ENST00000474249 EIF4G3O43432 1585 aaKnown RBP24.86■■□□□ 1.57
GAPDH-208ENST00000474249 TARBP1Q13395 1621 aaKnown RBP24.85■■□□□ 1.57
GAPDH-208ENST00000474249 AQRO60306 1485 aaKnown RBP eCLIP24.83■■□□□ 1.572e-13■■■■■ 33.3
GAPDH-208ENST00000474249 POLA1P09884 1462 aaPredicted RBP24.76■■□□□ 1.55
GAPDH-208ENST00000474249 CYB5RLQ6IPT4 315 aa24.73■■□□□ 1.55
GAPDH-208ENST00000474249 CHD1O14646 1710 aa24.71■■□□□ 1.55
GAPDH-208ENST00000474249 RAD54L2Q9Y4B4 1467 aa24.68■■□□□ 1.54
GAPDH-208ENST00000474249 ARAP1Q96P48 1450 aa24.66■■□□□ 1.54
GAPDH-208ENST00000474249 SOGA1O94964 1423 aa24.64■■□□□ 1.54
GAPDH-208ENST00000474249 TDRD9Q8NDG6 1382 aaKnown RBP24.63■■□□□ 1.53
GAPDH-208ENST00000474249 FBLN2P98095 1184 aa24.61■■□□□ 1.53
GAPDH-208ENST00000474249 FGD5Q6ZNL6 1462 aa24.55■■□□□ 1.52
GAPDH-208ENST00000474249 WDR97A6NE52 1622 aa24.54■■□□□ 1.52
GAPDH-208ENST00000474249 CUX1P39880 1505 aa24.52■■□□□ 1.52
GAPDH-208ENST00000474249 CLASP1Q7Z460 1538 aa24.51■■□□□ 1.51
GAPDH-208ENST00000474249 SNAPC4Q5SXM2 1469 aa24.51■■□□□ 1.51
GAPDH-208ENST00000474249 MAGI1Q96QZ7 1491 aaPredicted RBP24.46■■□□□ 1.51
GAPDH-208ENST00000474249 TRHP20396 242 aaPredicted RBP24.44■■□□□ 1.5
GAPDH-208ENST00000474249 GRIN2BQ13224 1484 aa24.44■■□□□ 1.5
GAPDH-208ENST00000474249 CHMP7Q8WUX9 453 aaPredicted RBP24.43■■□□□ 1.5
GAPDH-208ENST00000474249 SYNJ2O15056 1496 aa24.39■■□□□ 1.49
GAPDH-208ENST00000474249 SYNJ1O43426 1573 aa24.38■■□□□ 1.49
GAPDH-208ENST00000474249 GAPVD1Q14C86 1478 aa24.31■■□□□ 1.48
GAPDH-208ENST00000474249 ABCA10Q8WWZ4 1543 aa24.3■■□□□ 1.48
GAPDH-208ENST00000474249 PBRM1Q86U86 1689 aa24.25■■□□□ 1.47
GAPDH-208ENST00000474249 ABCA5Q8WWZ7 1642 aa24.25■■□□□ 1.47
GAPDH-208ENST00000474249 GRIN2AQ12879 1464 aa24.12■■□□□ 1.45
GAPDH-208ENST00000474249 ERCC6L2Q5T890 1561 aa24.12■■□□□ 1.45
GAPDH-208ENST00000474249 NUP160Q12769 1436 aa24.11■■□□□ 1.45
GAPDH-208ENST00000474249 WRNQ14191 1432 aaPredicted RBP eCLIP24.11■■□□□ 1.45
GAPDH-208ENST00000474249 ADAMTS12P58397 1594 aa24.05■■□□□ 1.44
GAPDH-208ENST00000474249 CEP170Q5SW79 1584 aa24.05■■□□□ 1.44
GAPDH-208ENST00000474249 SUPT5HO00267 1087 aaKnown RBP24.04■■□□□ 1.44
GAPDH-208ENST00000474249 TOP2BQ02880 1626 aa24.03■■□□□ 1.44
GAPDH-208ENST00000474249 BIVM-ERCC5R4GMW8 1640 aa24.02■■□□□ 1.44
GAPDH-208ENST00000474249 FHAD1B1AJZ9 1412 aa24.01■■□□□ 1.43
GAPDH-208ENST00000474249 SHROOM2Q13796 1616 aa24.01■■□□□ 1.43
GAPDH-208ENST00000474249 ERICH3Q5RHP9 1530 aa23.96■■□□□ 1.43
GAPDH-208ENST00000474249 AEBP2Q6ZN18 517 aaPredicted RBP23.86■■□□□ 1.41
GAPDH-208ENST00000474249 PRG4Q92954 1404 aaPredicted RBP23.85■■□□□ 1.41
GAPDH-208ENST00000474249 JPH4Q96JJ6 628 aa23.84■■□□□ 1.41
GAPDH-208ENST00000474249 KIF13AQ9H1H9 1805 aa23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms