RNA–Protein interactions for RNA: ENST00000430077.6

SLC6A8-204, Transcript of solute carrier family 6 member 8, humanhuman

TSL 2 BASIC

Gene SLC6A8, Length 1,892 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A8-204ENST00000430077 NISCHQ9Y2I1 1504 aa37.92■■■■□ 3.66
SLC6A8-204ENST00000430077 CCDC180Q9P1Z9 1646 aa33.24■■■□□ 2.91
SLC6A8-204ENST00000430077 ABCC9O60706 1549 aa31.85■■■□□ 2.69
SLC6A8-204ENST00000430077 ZCCHC6Q5VYS8 1495 aaKnown RBP31.78■■■□□ 2.68
SLC6A8-204ENST00000430077 DCAF8L2P0C7V8 631 aa31.49■■■□□ 2.63
SLC6A8-204ENST00000430077 DCAF1Q9Y4B6 1507 aa31.34■■■□□ 2.61
SLC6A8-204ENST00000430077 MYO15BQ96JP2 1530 aa31.12■■■□□ 2.57
SLC6A8-204ENST00000430077 NACADO15069 1562 aa31.06■■■□□ 2.56
SLC6A8-204ENST00000430077 RB1CC1Q8TDY2 1594 aa30.91■■■□□ 2.54
SLC6A8-204ENST00000430077 SHROOM4Q9ULL8 1493 aa30.69■■■□□ 2.5
SLC6A8-204ENST00000430077 SCRIBQ14160 1630 aa30.56■■■□□ 2.48
SLC6A8-204ENST00000430077 UNC13AQ9UPW8 1703 aa30.22■■■□□ 2.43
SLC6A8-204ENST00000430077 BICRAQ9NZM4 1560 aa29.97■■■□□ 2.39
SLC6A8-204ENST00000430077 PABPN1Q86U42 306 aaKnown RBP eCLIP29.96■■■□□ 2.397e-11■□□□□ 9.9
SLC6A8-204ENST00000430077 CECR2Q9BXF3 1484 aa29.51■■■□□ 2.32
SLC6A8-204ENST00000430077 BAZ1AQ9NRL2 1556 aaPredicted RBP29.32■■■□□ 2.28
SLC6A8-204ENST00000430077 SUPT5HO00267 1087 aaKnown RBP29.31■■■□□ 2.28
SLC6A8-204ENST00000430077 MROH2BQ7Z745 1585 aa29.29■■■□□ 2.28
SLC6A8-204ENST00000430077 RSF1Q96T23 1441 aaPredicted RBP29.27■■■□□ 2.28
SLC6A8-204ENST00000430077 SMARCA4P51532 1647 aa29.24■■■□□ 2.27
SLC6A8-204ENST00000430077 EIF4G1Q04637 1599 aaKnown RBP29.12■■■□□ 2.25
SLC6A8-204ENST00000430077 WIZO95785 1651 aa29.02■■■□□ 2.24
SLC6A8-204ENST00000430077 PEG3Q9GZU2 1588 aa28.88■■■□□ 2.21
SLC6A8-204ENST00000430077 ATAD2BQ9ULI0 1458 aa28.87■■■□□ 2.21
SLC6A8-204ENST00000430077 SMARCA2P51531 1590 aa28.83■■■□□ 2.21
SLC6A8-204ENST00000430077 CC2D2AQ9P2K1 1620 aa28.79■■■□□ 2.2
SLC6A8-204ENST00000430077 TOP2AP11388 1531 aaKnown RBP28.72■■■□□ 2.19
SLC6A8-204ENST00000430077 BAZ1BQ9UIG0 1483 aaKnown RBP28.7■■■□□ 2.18
SLC6A8-204ENST00000430077 NCAPD3P42695 1498 aa28.68■■■□□ 2.18
SLC6A8-204ENST00000430077 HMGXB3Q12766 1538 aa28.61■■■□□ 2.17
SLC6A8-204ENST00000430077 DNAJC5BQ9UF47 199 aa28.44■■■□□ 2.14
SLC6A8-204ENST00000430077 CCDC88BA6NC98 1476 aa28.41■■■□□ 2.14
SLC6A8-204ENST00000430077 CFTRP13569 1480 aa27.93■■■□□ 2.06
SLC6A8-204ENST00000430077 CADPSQ9ULU8 1353 aa27.93■■■□□ 2.06
SLC6A8-204ENST00000430077 NESP48681 1621 aa27.82■■■□□ 2.04
SLC6A8-204ENST00000430077 CHIC1Q5VXU3 224 aa27.81■■■□□ 2.04
SLC6A8-204ENST00000430077 LAMC3Q9Y6N6 1575 aa27.77■■■□□ 2.04
SLC6A8-204ENST00000430077 PRDM2Q13029 1718 aa27.72■■■□□ 2.03
SLC6A8-204ENST00000430077 ABCC8Q09428 1581 aa27.7■■■□□ 2.02
SLC6A8-204ENST00000430077 FANCD2Q9BXW9 1451 aa27.63■■■□□ 2.01
SLC6A8-204ENST00000430077 PDS5BQ9NTI5 1447 aa27.59■■■□□ 2.01
SLC6A8-204ENST00000430077 TRIM41Q8WV44 630 aa27.58■■■□□ 2.01
SLC6A8-204ENST00000430077 WRNQ14191 1432 aaPredicted RBP eCLIP27.57■■■□□ 2
SLC6A8-204ENST00000430077 CEP164Q9UPV0 1460 aa27.5■■□□□ 1.99
SLC6A8-204ENST00000430077 SYNJ1O43426 1573 aa27.47■■□□□ 1.99
SLC6A8-204ENST00000430077 KIF21AQ7Z4S6 1674 aa27.46■■□□□ 1.99
SLC6A8-204ENST00000430077 CUX1P39880 1505 aa27.41■■□□□ 1.98
SLC6A8-204ENST00000430077 TOP2BQ02880 1626 aa27.38■■□□□ 1.97
SLC6A8-204ENST00000430077 ERCC6Q03468 1493 aa27.36■■□□□ 1.97
SLC6A8-204ENST00000430077 BIVM-ERCC5R4GMW8 1640 aa27.34■■□□□ 1.97
SLC6A8-204ENST00000430077 URB2Q14146 1524 aaKnown RBP27.3■■□□□ 1.96
SLC6A8-204ENST00000430077 DNMBPQ6XZF7 1577 aa27.29■■□□□ 1.96
SLC6A8-204ENST00000430077 TOPBP1Q92547 1522 aa27.28■■□□□ 1.96
SLC6A8-204ENST00000430077 MRC2Q9UBG0 1479 aa27.26■■□□□ 1.95
SLC6A8-204ENST00000430077 FGD5Q6ZNL6 1462 aa27.19■■□□□ 1.94
SLC6A8-204ENST00000430077 THOC2Q8NI27 1593 aaKnown RBP27.13■■□□□ 1.93
SLC6A8-204ENST00000430077 WDR62O43379 1518 aa27.12■■□□□ 1.93
SLC6A8-204ENST00000430077 POLA1P09884 1462 aaPredicted RBP27.12■■□□□ 1.93
SLC6A8-204ENST00000430077 SOGA1O94964 1423 aa27.09■■□□□ 1.93
SLC6A8-204ENST00000430077 FAM9AQ8IZU1 332 aaPredicted RBP27.09■■□□□ 1.93
SLC6A8-204ENST00000430077 RAD54L2Q9Y4B4 1467 aa27.03■■□□□ 1.92
SLC6A8-204ENST00000430077 RUSC2Q8N2Y8 1516 aa27.01■■□□□ 1.91
SLC6A8-204ENST00000430077 CUX2O14529 1486 aa26.94■■□□□ 1.9
SLC6A8-204ENST00000430077 EEA1Q15075 1411 aa26.94■■□□□ 1.9
SLC6A8-204ENST00000430077 ABCA10Q8WWZ4 1543 aa26.93■■□□□ 1.9
SLC6A8-204ENST00000430077 KIF27Q86VH2 1401 aa26.91■■□□□ 1.9
SLC6A8-204ENST00000430077 TARBP1Q13395 1621 aaKnown RBP26.89■■□□□ 1.89
SLC6A8-204ENST00000430077 IFT140Q96RY7 1462 aa26.86■■□□□ 1.89
SLC6A8-204ENST00000430077 WDR97A6NE52 1622 aa26.85■■□□□ 1.89
SLC6A8-204ENST00000430077 CSRNP3Q8WYN3 585 aa26.84■■□□□ 1.89
SLC6A8-204ENST00000430077 TDRD9Q8NDG6 1382 aaKnown RBP26.81■■□□□ 1.88
SLC6A8-204ENST00000430077 LOC105371045A0A1W2PR82 267 aa26.75■■□□□ 1.87
SLC6A8-204ENST00000430077 EHMT2Q96KQ7 1210 aa26.74■■□□□ 1.87
SLC6A8-204ENST00000430077 ABCA5Q8WWZ7 1642 aa26.74■■□□□ 1.87
SLC6A8-204ENST00000430077 ZNF608Q9ULD9 1512 aaPredicted RBP26.74■■□□□ 1.87
SLC6A8-204ENST00000430077 GAPVD1Q14C86 1478 aa26.72■■□□□ 1.87
SLC6A8-204ENST00000430077 AQRO60306 1485 aaKnown RBP eCLIP26.7■■□□□ 1.875e-14■■■■■ 33.5
SLC6A8-204ENST00000430077 IGF1RP08069 1367 aa26.7■■□□□ 1.87
SLC6A8-204ENST00000430077 EIF4G3O43432 1585 aaKnown RBP26.63■■□□□ 1.85
SLC6A8-204ENST00000430077 PRXQ9BXM0 1461 aa26.61■■□□□ 1.85
SLC6A8-204ENST00000430077 KIF21BO75037 1637 aa26.61■■□□□ 1.85
SLC6A8-204ENST00000430077 ERICH3Q5RHP9 1530 aa26.6■■□□□ 1.85
SLC6A8-204ENST00000430077 GRIN2BQ13224 1484 aa26.57■■□□□ 1.84
SLC6A8-204ENST00000430077 PBRM1Q86U86 1689 aa26.57■■□□□ 1.84
SLC6A8-204ENST00000430077 CARMIL1Q5VZK9 1371 aa26.57■■□□□ 1.84
SLC6A8-204ENST00000430077 GOLGA3Q08378 1498 aa26.57■■□□□ 1.84
SLC6A8-204ENST00000430077 RAPGEF2Q9Y4G8 1499 aa26.57■■□□□ 1.84
SLC6A8-204ENST00000430077 CUL7Q14999 1698 aa26.53■■□□□ 1.84
SLC6A8-204ENST00000430077 UBTFP17480 764 aaKnown RBP26.49■■□□□ 1.83
SLC6A8-204ENST00000430077 SNAPC4Q5SXM2 1469 aa26.46■■□□□ 1.83
SLC6A8-204ENST00000430077 ADAMTS12P58397 1594 aa26.43■■□□□ 1.82
SLC6A8-204ENST00000430077 FHAD1B1AJZ9 1412 aa26.42■■□□□ 1.82
SLC6A8-204ENST00000430077 MAGI1Q96QZ7 1491 aaPredicted RBP26.39■■□□□ 1.82
SLC6A8-204ENST00000430077 TNIKQ9UKE5 1360 aa26.39■■□□□ 1.81
SLC6A8-204ENST00000430077 SYNJ2O15056 1496 aa26.3■■□□□ 1.8
SLC6A8-204ENST00000430077 CHMP7Q8WUX9 453 aaPredicted RBP26.27■■□□□ 1.8
SLC6A8-204ENST00000430077 FBLN2P98095 1184 aa26.26■■□□□ 1.79
SLC6A8-204ENST00000430077 GRIN2AQ12879 1464 aa26.25■■□□□ 1.79
SLC6A8-204ENST00000430077 CEP162Q5TB80 1403 aa26.24■■□□□ 1.79
SLC6A8-204ENST00000430077 RANGAP1P46060 587 aaPredicted RBP26.21■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms