RNA–Protein interactions for RNA: ENST00000302907.8

RPS9-201, Transcript of ribosomal protein S9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS9, Length 829 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS9-201ENST00000302907 NISCHQ9Y2I1 1504 aa35.2■■■■□ 3.23
RPS9-201ENST00000302907 CCDC180Q9P1Z9 1646 aa31.55■■■□□ 2.64
RPS9-201ENST00000302907 ABCC9O60706 1549 aa31.33■■■□□ 2.61
RPS9-201ENST00000302907 RB1CC1Q8TDY2 1594 aa29.89■■■□□ 2.38
RPS9-201ENST00000302907 NACADO15069 1562 aa29.7■■■□□ 2.35
RPS9-201ENST00000302907 DCAF8L2P0C7V8 631 aa29.66■■■□□ 2.34
RPS9-201ENST00000302907 UNC13AQ9UPW8 1703 aa29.43■■■□□ 2.3
RPS9-201ENST00000302907 MYO15BQ96JP2 1530 aa29.29■■■□□ 2.28
RPS9-201ENST00000302907 ZCCHC6Q5VYS8 1495 aaKnown RBP29.2■■■□□ 2.26
RPS9-201ENST00000302907 PABPN1Q86U42 306 aaKnown RBP eCLIP29.18■■■□□ 2.26
RPS9-201ENST00000302907 DNAJC5BQ9UF47 199 aa29.17■■■□□ 2.26
RPS9-201ENST00000302907 BICRAQ9NZM4 1560 aa29.05■■■□□ 2.24
RPS9-201ENST00000302907 DCAF1Q9Y4B6 1507 aa29.03■■■□□ 2.24
RPS9-201ENST00000302907 SCRIBQ14160 1630 aa28.8■■■□□ 2.2
RPS9-201ENST00000302907 SHROOM4Q9ULL8 1493 aa28.51■■■□□ 2.15
RPS9-201ENST00000302907 CC2D2AQ9P2K1 1620 aa28.34■■■□□ 2.13
RPS9-201ENST00000302907 EIF4G1Q04637 1599 aaKnown RBP28.28■■■□□ 2.12
RPS9-201ENST00000302907 CECR2Q9BXF3 1484 aa28.15■■■□□ 2.1
RPS9-201ENST00000302907 SMARCA4P51532 1647 aa27.46■■□□□ 1.99
RPS9-201ENST00000302907 NCAPD3P42695 1498 aa27.38■■□□□ 1.97
RPS9-201ENST00000302907 ATAD2BQ9ULI0 1458 aa27.37■■□□□ 1.97
RPS9-201ENST00000302907 BAZ1AQ9NRL2 1556 aaPredicted RBP27.31■■□□□ 1.96
RPS9-201ENST00000302907 SMARCA2P51531 1590 aa27.3■■□□□ 1.96
RPS9-201ENST00000302907 HMGXB3Q12766 1538 aa27.23■■□□□ 1.95
RPS9-201ENST00000302907 MROH2BQ7Z745 1585 aa27.16■■□□□ 1.94
RPS9-201ENST00000302907 PEG3Q9GZU2 1588 aa27.13■■□□□ 1.93
RPS9-201ENST00000302907 BAZ1BQ9UIG0 1483 aaKnown RBP27.13■■□□□ 1.93
RPS9-201ENST00000302907 NESP48681 1621 aa26.99■■□□□ 1.91
RPS9-201ENST00000302907 ERCC6Q03468 1493 aa26.99■■□□□ 1.91
RPS9-201ENST00000302907 WIZO95785 1651 aa26.94■■□□□ 1.9
RPS9-201ENST00000302907 CUX2O14529 1486 aa26.82■■□□□ 1.88
RPS9-201ENST00000302907 LAMC3Q9Y6N6 1575 aa26.79■■□□□ 1.88
RPS9-201ENST00000302907 KIF21AQ7Z4S6 1674 aa26.75■■□□□ 1.87
RPS9-201ENST00000302907 THOC2Q8NI27 1593 aaKnown RBP26.68■■□□□ 1.86
RPS9-201ENST00000302907 RSF1Q96T23 1441 aaPredicted RBP26.62■■□□□ 1.85
RPS9-201ENST00000302907 PDS5BQ9NTI5 1447 aa26.56■■□□□ 1.84
RPS9-201ENST00000302907 CADPSQ9ULU8 1353 aa26.56■■□□□ 1.84
RPS9-201ENST00000302907 DNAJC5Q9H3Z4 198 aa26.55■■□□□ 1.84
RPS9-201ENST00000302907 TOP2AP11388 1531 aaKnown RBP26.5■■□□□ 1.83
RPS9-201ENST00000302907 MRC2Q9UBG0 1479 aa26.36■■□□□ 1.81
RPS9-201ENST00000302907 CFTRP13569 1480 aa26.31■■□□□ 1.8
RPS9-201ENST00000302907 CEP164Q9UPV0 1460 aa26.31■■□□□ 1.8
RPS9-201ENST00000302907 FANCD2Q9BXW9 1451 aa26.3■■□□□ 1.8
RPS9-201ENST00000302907 WDR62O43379 1518 aa26.3■■□□□ 1.8
RPS9-201ENST00000302907 PRDM2Q13029 1718 aa26.3■■□□□ 1.8
RPS9-201ENST00000302907 CCDC88BA6NC98 1476 aa26.21■■□□□ 1.79
RPS9-201ENST00000302907 URB2Q14146 1524 aaKnown RBP26.1■■□□□ 1.77
RPS9-201ENST00000302907 TOPBP1Q92547 1522 aa25.85■■□□□ 1.73
RPS9-201ENST00000302907 DNMBPQ6XZF7 1577 aa25.78■■□□□ 1.72
RPS9-201ENST00000302907 ZNF608Q9ULD9 1512 aaPredicted RBP25.75■■□□□ 1.71
RPS9-201ENST00000302907 ABCC8Q09428 1581 aa25.74■■□□□ 1.71
RPS9-201ENST00000302907 IFT140Q96RY7 1462 aa25.74■■□□□ 1.71
RPS9-201ENST00000302907 SUPT5HO00267 1087 aaKnown RBP25.68■■□□□ 1.7
RPS9-201ENST00000302907 EIF4G3O43432 1585 aaKnown RBP25.65■■□□□ 1.7
RPS9-201ENST00000302907 TARBP1Q13395 1621 aaKnown RBP25.64■■□□□ 1.7
RPS9-201ENST00000302907 OSCARQ8IYS5 282 aa25.63■■□□□ 1.69
RPS9-201ENST00000302907 POLA1P09884 1462 aaPredicted RBP25.59■■□□□ 1.69
RPS9-201ENST00000302907 TRIM41Q8WV44 630 aa25.57■■□□□ 1.68
RPS9-201ENST00000302907 AQRO60306 1485 aaKnown RBP eCLIP25.53■■□□□ 1.685e-10■■■■■ 40.3
RPS9-201ENST00000302907 RAD54L2Q9Y4B4 1467 aa25.53■■□□□ 1.68
RPS9-201ENST00000302907 CHD1O14646 1710 aa25.52■■□□□ 1.68
RPS9-201ENST00000302907 CUX1P39880 1505 aa25.51■■□□□ 1.67
RPS9-201ENST00000302907 FGD5Q6ZNL6 1462 aa25.48■■□□□ 1.67
RPS9-201ENST00000302907 SOGA1O94964 1423 aa25.46■■□□□ 1.67
RPS9-201ENST00000302907 RIMBP3CA6NJZ7 1639 aa25.41■■□□□ 1.66
RPS9-201ENST00000302907 RIMBP3BA6NNM3 1639 aa25.41■■□□□ 1.66
RPS9-201ENST00000302907 RIMBP3Q9UFD9 1639 aa25.41■■□□□ 1.66
RPS9-201ENST00000302907 TDRD9Q8NDG6 1382 aaKnown RBP25.4■■□□□ 1.66
RPS9-201ENST00000302907 WDR97A6NE52 1622 aa25.37■■□□□ 1.65
RPS9-201ENST00000302907 FBLN2P98095 1184 aa25.33■■□□□ 1.65
RPS9-201ENST00000302907 PBRM1Q86U86 1689 aa25.29■■□□□ 1.64
RPS9-201ENST00000302907 SNAPC4Q5SXM2 1469 aa25.28■■□□□ 1.64
RPS9-201ENST00000302907 ARHGEF11O15085 1522 aa25.27■■□□□ 1.64
RPS9-201ENST00000302907 GRIN2BQ13224 1484 aa25.21■■□□□ 1.63
RPS9-201ENST00000302907 BIVM-ERCC5R4GMW8 1640 aa25.2■■□□□ 1.62
RPS9-201ENST00000302907 ABCA5Q8WWZ7 1642 aa25.18■■□□□ 1.62
RPS9-201ENST00000302907 MAGI1Q96QZ7 1491 aaPredicted RBP25.17■■□□□ 1.62
RPS9-201ENST00000302907 SYNJ1O43426 1573 aa25.17■■□□□ 1.62
RPS9-201ENST00000302907 ABCA10Q8WWZ4 1543 aa25.17■■□□□ 1.62
RPS9-201ENST00000302907 GAPVD1Q14C86 1478 aa25.16■■□□□ 1.62
RPS9-201ENST00000302907 TOP2BQ02880 1626 aa25.15■■□□□ 1.62
RPS9-201ENST00000302907 CHMP7Q8WUX9 453 aaPredicted RBP25.13■■□□□ 1.61
RPS9-201ENST00000302907 WRNQ14191 1432 aaPredicted RBP eCLIP25.11■■□□□ 1.61
RPS9-201ENST00000302907 SYNJ2O15056 1496 aa25.09■■□□□ 1.61
RPS9-201ENST00000302907 CLASP1Q7Z460 1538 aa25.09■■□□□ 1.61
RPS9-201ENST00000302907 CYB5RLQ6IPT4 315 aa25.07■■□□□ 1.6
RPS9-201ENST00000302907 ARAP1Q96P48 1450 aa25.04■■□□□ 1.6
RPS9-201ENST00000302907 ADAMTS12P58397 1594 aa24.96■■□□□ 1.59
RPS9-201ENST00000302907 GRIN2AQ12879 1464 aa24.89■■□□□ 1.58
RPS9-201ENST00000302907 CEP170Q5SW79 1584 aa24.86■■□□□ 1.57
RPS9-201ENST00000302907 ERICH3Q5RHP9 1530 aa24.86■■□□□ 1.57
RPS9-201ENST00000302907 FHAD1B1AJZ9 1412 aa24.82■■□□□ 1.56
RPS9-201ENST00000302907 ERCC6L2Q5T890 1561 aa24.79■■□□□ 1.56
RPS9-201ENST00000302907 NUP160Q12769 1436 aa24.78■■□□□ 1.56
RPS9-201ENST00000302907 TRHP20396 242 aaPredicted RBP24.73■■□□□ 1.55
RPS9-201ENST00000302907 SHROOM2Q13796 1616 aa24.72■■□□□ 1.55
RPS9-201ENST00000302907 RUSC2Q8N2Y8 1516 aa24.61■■□□□ 1.53
RPS9-201ENST00000302907 CUL7Q14999 1698 aa24.6■■□□□ 1.53
RPS9-201ENST00000302907 KIF27Q86VH2 1401 aa24.6■■□□□ 1.53
RPS9-201ENST00000302907 IGF1RP08069 1367 aa24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms