RNA–Protein interactions for RNA: ENST00000639658.1

POLR2B-213, Transcript of RNA polymerase II subunit B, humanhuman

TSL 5 BASIC

Gene POLR2B, Length 3,300 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2B-213ENST00000639658 NISCHQ9Y2I1 1504 aa10.23□□□□□ -0.77
POLR2B-213ENST00000639658 PELP1Q8IZL8 1130 aaKnown RBP10.13□□□□□ -0.79
POLR2B-213ENST00000639658 MYT1Q01538 1121 aa10.03□□□□□ -0.8
POLR2B-213ENST00000639658 TTBK1Q5TCY1 1321 aaPredicted RBP9.71□□□□□ -0.85
POLR2B-213ENST00000639658 HRCP23327 699 aa9.67□□□□□ -0.86
POLR2B-213ENST00000639658 DCAF1Q9Y4B6 1507 aa9.35□□□□□ -0.91
POLR2B-213ENST00000639658 CCDC180Q9P1Z9 1646 aa9.32□□□□□ -0.92
POLR2B-213ENST00000639658 MYO15BQ96JP2 1530 aa9.25□□□□□ -0.93
POLR2B-213ENST00000639658 SCAF1Q9H7N4 1312 aaKnown RBP9.17□□□□□ -0.94
POLR2B-213ENST00000639658 ZEB1P37275 1124 aaPredicted RBP9.13□□□□□ -0.95
POLR2B-213ENST00000639658 PPARGC1BQ86YN6 1023 aaKnown RBP9.05□□□□□ -0.96
POLR2B-213ENST00000639658 APLP2Q06481 763 aa9□□□□□ -0.97
POLR2B-213ENST00000639658 ERICH6Q7L0X2 663 aa9□□□□□ -0.97
POLR2B-213ENST00000639658 PCGF6Q9BYE7 350 aa8.98□□□□□ -0.97
POLR2B-213ENST00000639658 TRIM26Q12899 539 aaPredicted RBP8.95□□□□□ -0.98
POLR2B-213ENST00000639658 ACIN1Q9UKV3 1341 aaKnown RBP8.95□□□□□ -0.98
POLR2B-213ENST00000639658 CHIC1Q5VXU3 224 aa8.93□□□□□ -0.98
POLR2B-213ENST00000639658 PRKCSHP14314 528 aaPredicted RBP8.93□□□□□ -0.98
POLR2B-213ENST00000639658 ZCCHC6Q5VYS8 1495 aaKnown RBP8.84□□□□□ -0.99
POLR2B-213ENST00000639658 BCL11AQ9H165 835 aa8.84□□□□□ -0.99
POLR2B-213ENST00000639658 CENPBP07199 599 aaPredicted RBP8.78□□□□□ -1
POLR2B-213ENST00000639658 CLSPNQ9HAW4 1339 aa8.77□□□□□ -1
POLR2B-213ENST00000639658 NEUROD1Q13562 356 aa8.77□□□□□ -1.01
POLR2B-213ENST00000639658 GTF3C3Q9Y5Q9 886 aa8.7□□□□□ -1.02
POLR2B-213ENST00000639658 FAM9AQ8IZU1 332 aaPredicted RBP8.69□□□□□ -1.02
POLR2B-213ENST00000639658 SLC24A1O60721 1099 aa8.66□□□□□ -1.02
POLR2B-213ENST00000639658 ANP32EQ9BTT0 268 aa8.63□□□□□ -1.03
POLR2B-213ENST00000639658 TRIM41Q8WV44 630 aa8.6□□□□□ -1.03
POLR2B-213ENST00000639658 SUPT5HO00267 1087 aaKnown RBP8.57□□□□□ -1.04
POLR2B-213ENST00000639658 DIEXFQ68CQ4 756 aaKnown RBP8.53□□□□□ -1.04
POLR2B-213ENST00000639658 DAXXQ9UER7 740 aaPredicted RBP8.52□□□□□ -1.05
POLR2B-213ENST00000639658 SHROOM4Q9ULL8 1493 aa8.5□□□□□ -1.05
POLR2B-213ENST00000639658 WRNQ14191 1432 aaPredicted RBP eCLIP8.5□□□□□ -1.05
POLR2B-213ENST00000639658 ABCC9O60706 1549 aa8.49□□□□□ -1.05
POLR2B-213ENST00000639658 LOC105371045A0A1W2PR82 267 aa8.45□□□□□ -1.06
POLR2B-213ENST00000639658 MYT1LQ9UL68 1186 aa8.42□□□□□ -1.06
POLR2B-213ENST00000639658 TSHZ2Q9NRE2 1034 aa8.41□□□□□ -1.06
POLR2B-213ENST00000639658 ZNF316A6NFI3 1004 aaPredicted RBP8.41□□□□□ -1.06
POLR2B-213ENST00000639658 UBE2Q2Q8WVN8 375 aa8.37□□□□□ -1.07
POLR2B-213ENST00000639658 CSRNP3Q8WYN3 585 aa8.37□□□□□ -1.07
POLR2B-213ENST00000639658 RB1CC1Q8TDY2 1594 aa8.37□□□□□ -1.07
POLR2B-213ENST00000639658 SUPT16HQ9Y5B9 1047 aaKnown RBP8.36□□□□□ -1.07
POLR2B-213ENST00000639658 ERICH6BQ5W0A0 696 aa8.32□□□□□ -1.08
POLR2B-213ENST00000639658 EIF4G1Q04637 1599 aaKnown RBP8.32□□□□□ -1.08
POLR2B-213ENST00000639658 FANCIQ9NVI1 1328 aa8.27□□□□□ -1.09
POLR2B-213ENST00000639658 CCER1Q8TC90 406 aaPredicted RBP8.26□□□□□ -1.09
POLR2B-213ENST00000639658 EIF5BO60841 1220 aaKnown RBP8.26□□□□□ -1.09
POLR2B-213ENST00000639658 MIER1Q8N108 512 aa8.24□□□□□ -1.09
POLR2B-213ENST00000639658 RSF1Q96T23 1441 aaPredicted RBP8.21□□□□□ -1.1
POLR2B-213ENST00000639658 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.21□□□□□ -1.1
POLR2B-213ENST00000639658 RBM19Q9Y4C8 960 aaKnown RBP8.15□□□□□ -1.1
POLR2B-213ENST00000639658 CUX2O14529 1486 aa8.15□□□□□ -1.11
POLR2B-213ENST00000639658 EEA1Q15075 1411 aa8.15□□□□□ -1.11
POLR2B-213ENST00000639658 TNIKQ9UKE5 1360 aa8.14□□□□□ -1.11
POLR2B-213ENST00000639658 MSH5O43196 834 aa8.11□□□□□ -1.11
POLR2B-213ENST00000639658 ANO8Q9HCE9 1232 aaPredicted RBP8.09□□□□□ -1.11
POLR2B-213ENST00000639658 CEP162Q5TB80 1403 aa8.09□□□□□ -1.11
POLR2B-213ENST00000639658 BAZ1AQ9NRL2 1556 aaPredicted RBP8.06□□□□□ -1.12
POLR2B-213ENST00000639658 KIF21BO75037 1637 aa8.06□□□□□ -1.12
POLR2B-213ENST00000639658 YTHDC1Q96MU7 727 aaKnown RBP8.06□□□□□ -1.12
POLR2B-213ENST00000639658 C11orf95C9JLR9 678 aaPredicted RBP8.02□□□□□ -1.13
POLR2B-213ENST00000639658 PKNOX2Q96KN3 472 aa8.01□□□□□ -1.13
POLR2B-213ENST00000639658 DEKP35659 375 aaKnown RBP8.01□□□□□ -1.13
POLR2B-213ENST00000639658 NACADO15069 1562 aa8.01□□□□□ -1.13
POLR2B-213ENST00000639658 BAZ1BQ9UIG0 1483 aaKnown RBP8□□□□□ -1.13
POLR2B-213ENST00000639658 DHX57Q6P158 1386 aaKnown RBP7.99□□□□□ -1.13
POLR2B-213ENST00000639658 CCER2I3L3R5 266 aa7.99□□□□□ -1.13
POLR2B-213ENST00000639658 GOLGA3Q08378 1498 aa7.98□□□□□ -1.13
POLR2B-213ENST00000639658 SMARCA2P51531 1590 aa7.97□□□□□ -1.13
POLR2B-213ENST00000639658 SALL2Q9Y467 1007 aaPredicted RBP7.96□□□□□ -1.13
POLR2B-213ENST00000639658 NCAPD3P42695 1498 aa7.96□□□□□ -1.13
POLR2B-213ENST00000639658 WASHC2AQ641Q2 1341 aa7.95□□□□□ -1.14
POLR2B-213ENST00000639658 VPS8Q8N3P4 1428 aa7.94□□□□□ -1.14
POLR2B-213ENST00000639658 CEP164Q9UPV0 1460 aa7.94□□□□□ -1.14
POLR2B-213ENST00000639658 RRBP1Q9P2E9 1410 aaKnown RBP7.94□□□□□ -1.14
POLR2B-213ENST00000639658 WASHC2CQ9Y4E1 1318 aa7.93□□□□□ -1.14
POLR2B-213ENST00000639658 PODXL2Q9NZ53 605 aa7.93□□□□□ -1.14
POLR2B-213ENST00000639658 FKBP8Q14318 412 aa7.91□□□□□ -1.14
POLR2B-213ENST00000639658 USP35Q9P2H5 1018 aa7.9□□□□□ -1.14
POLR2B-213ENST00000639658 TOP2AP11388 1531 aaKnown RBP7.9□□□□□ -1.15
POLR2B-213ENST00000639658 TIMELESSQ9UNS1 1208 aa7.89□□□□□ -1.15
POLR2B-213ENST00000639658 MAPKBP1O60336 1514 aa7.89□□□□□ -1.15
POLR2B-213ENST00000639658 NEFLP07196 543 aa7.88□□□□□ -1.15
POLR2B-213ENST00000639658 PEG3Q9GZU2 1588 aa7.88□□□□□ -1.15
POLR2B-213ENST00000639658 SYNJ1O43426 1573 aa7.87□□□□□ -1.15
POLR2B-213ENST00000639658 CLIP1P30622 1438 aa7.87□□□□□ -1.15
POLR2B-213ENST00000639658 ABCC8Q09428 1581 aa7.87□□□□□ -1.15
POLR2B-213ENST00000639658 CDK11AQ9UQ88 783 aaPredicted RBP7.87□□□□□ -1.15
POLR2B-213ENST00000639658 WIZO95785 1651 aa7.87□□□□□ -1.15
POLR2B-213ENST00000639658 MROH2BQ7Z745 1585 aa7.87□□□□□ -1.15
POLR2B-213ENST00000639658 NOP58Q9Y2X3 529 aaKnown RBP7.86□□□□□ -1.15
POLR2B-213ENST00000639658 CCDC88BA6NC98 1476 aa7.86□□□□□ -1.15
POLR2B-213ENST00000639658 MAP3K1Q13233 1512 aa7.86□□□□□ -1.15
POLR2B-213ENST00000639658 PPP1R15AO75807 674 aaPredicted RBP7.85□□□□□ -1.15
POLR2B-213ENST00000639658 PLEKHG5O94827 1062 aa7.85□□□□□ -1.15
POLR2B-213ENST00000639658 GLIPR1L2Q4G1C9 344 aa7.83□□□□□ -1.16
POLR2B-213ENST00000639658 ERICH3Q5RHP9 1530 aa7.83□□□□□ -1.16
POLR2B-213ENST00000639658 PPP4R2Q9NY27 417 aa7.82□□□□□ -1.16
POLR2B-213ENST00000639658 RSPH6AQ9H0K4 717 aa7.81□□□□□ -1.16
POLR2B-213ENST00000639658 SCRIBQ14160 1630 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms