RNA–Protein interactions for RNA: ENST00000503388.1

NDFIP1-202, Transcript of Nedd4 family interacting protein 1, humanhuman

TSL 2

Gene NDFIP1, Length 4,164 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP1-202ENST00000503388 CCDC180Q9P1Z9 1646 aa10.47□□□□□ -0.73
NDFIP1-202ENST00000503388 NISCHQ9Y2I1 1504 aa10.36□□□□□ -0.75
NDFIP1-202ENST00000503388 MYO15BQ96JP2 1530 aa9.92□□□□□ -0.82
NDFIP1-202ENST00000503388 DCAF1Q9Y4B6 1507 aa9.65□□□□□ -0.87
NDFIP1-202ENST00000503388 SHROOM4Q9ULL8 1493 aa9.64□□□□□ -0.87
NDFIP1-202ENST00000503388 UNC13AQ9UPW8 1703 aa9.55□□□□□ -0.88
NDFIP1-202ENST00000503388 NACADO15069 1562 aa9.14□□□□□ -0.95
NDFIP1-202ENST00000503388 PRDM2Q13029 1718 aa9.03□□□□□ -0.96
NDFIP1-202ENST00000503388 BICRAQ9NZM4 1560 aa9.03□□□□□ -0.96
NDFIP1-202ENST00000503388 PEG3Q9GZU2 1588 aa9.02□□□□□ -0.97
NDFIP1-202ENST00000503388 ZCCHC6Q5VYS8 1495 aaKnown RBP8.91□□□□□ -0.98
NDFIP1-202ENST00000503388 RB1CC1Q8TDY2 1594 aa8.86□□□□□ -0.99
NDFIP1-202ENST00000503388 SMARCA2P51531 1590 aa8.73□□□□□ -1.01
NDFIP1-202ENST00000503388 WDR97A6NE52 1622 aa8.6□□□□□ -1.03
NDFIP1-202ENST00000503388 HMGXB3Q12766 1538 aa8.56□□□□□ -1.04
NDFIP1-202ENST00000503388 EIF4G1Q04637 1599 aaKnown RBP8.47□□□□□ -1.05
NDFIP1-202ENST00000503388 ABCC9O60706 1549 aa8.38□□□□□ -1.07
NDFIP1-202ENST00000503388 THOC2Q8NI27 1593 aaKnown RBP8.37□□□□□ -1.07
NDFIP1-202ENST00000503388 SCRIBQ14160 1630 aa8.3□□□□□ -1.08
NDFIP1-202ENST00000503388 SMARCA4P51532 1647 aa8.27□□□□□ -1.09
NDFIP1-202ENST00000503388 BAZ1BQ9UIG0 1483 aaKnown RBP8.21□□□□□ -1.1
NDFIP1-202ENST00000503388 BAZ1AQ9NRL2 1556 aaPredicted RBP8.19□□□□□ -1.1
NDFIP1-202ENST00000503388 CC2D2AQ9P2K1 1620 aa8.18□□□□□ -1.1
NDFIP1-202ENST00000503388 LAMC3Q9Y6N6 1575 aa8.17□□□□□ -1.1
NDFIP1-202ENST00000503388 NCAPD3P42695 1498 aa8.14□□□□□ -1.11
NDFIP1-202ENST00000503388 WDR62O43379 1518 aa8.11□□□□□ -1.11
NDFIP1-202ENST00000503388 BIVM-ERCC5R4GMW8 1640 aa8.07□□□□□ -1.12
NDFIP1-202ENST00000503388 CUX2O14529 1486 aa8.03□□□□□ -1.12
NDFIP1-202ENST00000503388 SHROOM2Q13796 1616 aa8.02□□□□□ -1.12
NDFIP1-202ENST00000503388 KIF21AQ7Z4S6 1674 aa8.01□□□□□ -1.13
NDFIP1-202ENST00000503388 AEBP2Q6ZN18 517 aaPredicted RBP7.99□□□□□ -1.13
NDFIP1-202ENST00000503388 TOP2AP11388 1531 aaKnown RBP7.96□□□□□ -1.14
NDFIP1-202ENST00000503388 TARBP1Q13395 1621 aaKnown RBP7.95□□□□□ -1.14
NDFIP1-202ENST00000503388 ABCA5Q8WWZ7 1642 aa7.89□□□□□ -1.15
NDFIP1-202ENST00000503388 PBRM1Q86U86 1689 aa7.83□□□□□ -1.16
NDFIP1-202ENST00000503388 ATAD2BQ9ULI0 1458 aa7.8□□□□□ -1.16
NDFIP1-202ENST00000503388 CLASP1Q7Z460 1538 aa7.8□□□□□ -1.16
NDFIP1-202ENST00000503388 DCAF8L2P0C7V8 631 aa7.76□□□□□ -1.17
NDFIP1-202ENST00000503388 CFTRP13569 1480 aa7.72□□□□□ -1.17
NDFIP1-202ENST00000503388 TOP2BQ02880 1626 aa7.68□□□□□ -1.18
NDFIP1-202ENST00000503388 DNMBPQ6XZF7 1577 aa7.68□□□□□ -1.18
NDFIP1-202ENST00000503388 BCORL1Q5H9F3 1711 aa7.68□□□□□ -1.18
NDFIP1-202ENST00000503388 WIZO95785 1651 aa7.66□□□□□ -1.18
NDFIP1-202ENST00000503388 NESP48681 1621 aa7.65□□□□□ -1.19
NDFIP1-202ENST00000503388 MROH2BQ7Z745 1585 aa7.62□□□□□ -1.19
NDFIP1-202ENST00000503388 ABCC8Q09428 1581 aa7.59□□□□□ -1.19
NDFIP1-202ENST00000503388 CUL7Q14999 1698 aa7.59□□□□□ -1.19
NDFIP1-202ENST00000503388 PPRC1Q5VV67 1664 aaKnown RBP7.59□□□□□ -1.2
NDFIP1-202ENST00000503388 CHD1O14646 1710 aa7.58□□□□□ -1.2
NDFIP1-202ENST00000503388 KIF13AQ9H1H9 1805 aa7.55□□□□□ -1.2
NDFIP1-202ENST00000503388 EIF4G3O43432 1585 aaKnown RBP7.54□□□□□ -1.2
NDFIP1-202ENST00000503388 SUPT5HO00267 1087 aaKnown RBP7.53□□□□□ -1.2
NDFIP1-202ENST00000503388 CTTNBP2Q8WZ74 1663 aa7.53□□□□□ -1.2
NDFIP1-202ENST00000503388 ADAMTS12P58397 1594 aa7.53□□□□□ -1.2
NDFIP1-202ENST00000503388 GLI2P10070 1586 aa7.51□□□□□ -1.21
NDFIP1-202ENST00000503388 ERICH3Q5RHP9 1530 aa7.5□□□□□ -1.21
NDFIP1-202ENST00000503388 RUSC2Q8N2Y8 1516 aa7.5□□□□□ -1.21
NDFIP1-202ENST00000503388 MRC2Q9UBG0 1479 aa7.49□□□□□ -1.21
NDFIP1-202ENST00000503388 KDM5BQ9UGL1 1544 aa7.49□□□□□ -1.21
NDFIP1-202ENST00000503388 ZEB1P37275 1124 aaPredicted RBP7.47□□□□□ -1.21
NDFIP1-202ENST00000503388 CECR2Q9BXF3 1484 aa7.47□□□□□ -1.21
NDFIP1-202ENST00000503388 ADCY10Q96PN6 1610 aa7.46□□□□□ -1.22
NDFIP1-202ENST00000503388 MAP3K4Q9Y6R4 1608 aa7.44□□□□□ -1.22
NDFIP1-202ENST00000503388 SAMD9Q5K651 1589 aa7.44□□□□□ -1.22
NDFIP1-202ENST00000503388 PELP1Q8IZL8 1130 aaKnown RBP7.43□□□□□ -1.22
NDFIP1-202ENST00000503388 URB2Q14146 1524 aaKnown RBP7.43□□□□□ -1.22
NDFIP1-202ENST00000503388 ABCA10Q8WWZ4 1543 aa7.42□□□□□ -1.22
NDFIP1-202ENST00000503388 CHIC1Q5VXU3 224 aa7.41□□□□□ -1.22
NDFIP1-202ENST00000503388 FAM9AQ8IZU1 332 aaPredicted RBP7.41□□□□□ -1.22
NDFIP1-202ENST00000503388 REREQ9P2R6 1566 aa7.38□□□□□ -1.23
NDFIP1-202ENST00000503388 MAPKBP1O60336 1514 aa7.38□□□□□ -1.23
NDFIP1-202ENST00000503388 APLP2Q06481 763 aa7.37□□□□□ -1.23
NDFIP1-202ENST00000503388 RSF1Q96T23 1441 aaPredicted RBP7.36□□□□□ -1.23
NDFIP1-202ENST00000503388 LRRIQ1Q96JM4 1722 aa7.36□□□□□ -1.23
NDFIP1-202ENST00000503388 RIMBP3CA6NJZ7 1639 aa7.35□□□□□ -1.23
NDFIP1-202ENST00000503388 RIMBP3BA6NNM3 1639 aa7.35□□□□□ -1.23
NDFIP1-202ENST00000503388 RIMBP3Q9UFD9 1639 aa7.35□□□□□ -1.23
NDFIP1-202ENST00000503388 IFT140Q96RY7 1462 aa7.34□□□□□ -1.23
NDFIP1-202ENST00000503388 KDM5AP29375 1690 aaKnown RBP7.32□□□□□ -1.24
NDFIP1-202ENST00000503388 MAGI1Q96QZ7 1491 aaPredicted RBP7.32□□□□□ -1.24
NDFIP1-202ENST00000503388 CUX1P39880 1505 aa7.32□□□□□ -1.24
NDFIP1-202ENST00000503388 TOPBP1Q92547 1522 aa7.3□□□□□ -1.24
NDFIP1-202ENST00000503388 ARAP3Q8WWN8 1544 aa7.3□□□□□ -1.24
NDFIP1-202ENST00000503388 UHRF1BP1LA0JNW5 1464 aa7.3□□□□□ -1.24
NDFIP1-202ENST00000503388 NUP160Q12769 1436 aa7.29□□□□□ -1.24
NDFIP1-202ENST00000503388 FAM135AQ9P2D6 1515 aa7.28□□□□□ -1.24
NDFIP1-202ENST00000503388 CFAP43Q8NDM7 1665 aa7.28□□□□□ -1.24
NDFIP1-202ENST00000503388 CEP170Q5SW79 1584 aa7.27□□□□□ -1.25
NDFIP1-202ENST00000503388 KIF21BO75037 1637 aa7.26□□□□□ -1.25
NDFIP1-202ENST00000503388 UGGT2Q9NYU1 1516 aa7.25□□□□□ -1.25
NDFIP1-202ENST00000503388 MROH2AA6NES4 1674 aa7.25□□□□□ -1.25
NDFIP1-202ENST00000503388 SYNJ1O43426 1573 aa7.24□□□□□ -1.25
NDFIP1-202ENST00000503388 TRIM41Q8WV44 630 aa7.24□□□□□ -1.25
NDFIP1-202ENST00000503388 ZNF608Q9ULD9 1512 aaPredicted RBP7.23□□□□□ -1.25
NDFIP1-202ENST00000503388 CCDC88BA6NC98 1476 aa7.23□□□□□ -1.25
NDFIP1-202ENST00000503388 CADPSQ9ULU8 1353 aa7.22□□□□□ -1.25
NDFIP1-202ENST00000503388 KIAA0556O60303 1618 aa7.21□□□□□ -1.26
NDFIP1-202ENST00000503388 PCF11O94913 1555 aaKnown RBP7.21□□□□□ -1.26
NDFIP1-202ENST00000503388 ABCA9Q8IUA7 1624 aa7.2□□□□□ -1.26
NDFIP1-202ENST00000503388 ZNF142P52746 1687 aaPredicted RBP7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms