RNA–Protein interactions for RNA: ENST00000495002.5

RPS9-212, Transcript of ribosomal protein S9, humanhuman

TSL 1 (best)

Gene RPS9, Length 956 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS9-212ENST00000495002 NISCHQ9Y2I1 1504 aa29.36■■■□□ 2.29
RPS9-212ENST00000495002 CCDC180Q9P1Z9 1646 aa25.85■■□□□ 1.73
RPS9-212ENST00000495002 ABCC9O60706 1549 aa25.41■■□□□ 1.66
RPS9-212ENST00000495002 DNAJC5BQ9UF47 199 aa24.91■■□□□ 1.58
RPS9-212ENST00000495002 ZCCHC6Q5VYS8 1495 aaKnown RBP24.63■■□□□ 1.53
RPS9-212ENST00000495002 DCAF1Q9Y4B6 1507 aa24.51■■□□□ 1.51
RPS9-212ENST00000495002 MYO15BQ96JP2 1530 aa24.39■■□□□ 1.49
RPS9-212ENST00000495002 NACADO15069 1562 aa24.15■■□□□ 1.46
RPS9-212ENST00000495002 DCAF8L2P0C7V8 631 aa24■■□□□ 1.43
RPS9-212ENST00000495002 RB1CC1Q8TDY2 1594 aa23.94■■□□□ 1.42
RPS9-212ENST00000495002 DNAJC5Q9H3Z4 198 aa23.85■■□□□ 1.41
RPS9-212ENST00000495002 PABPN1Q86U42 306 aaKnown RBP eCLIP23.52■■□□□ 1.36
RPS9-212ENST00000495002 SCRIBQ14160 1630 aa23.41■■□□□ 1.34
RPS9-212ENST00000495002 SHROOM4Q9ULL8 1493 aa23.35■■□□□ 1.33
RPS9-212ENST00000495002 UNC13AQ9UPW8 1703 aa23.23■■□□□ 1.31
RPS9-212ENST00000495002 BICRAQ9NZM4 1560 aa23.09■■□□□ 1.29
RPS9-212ENST00000495002 CECR2Q9BXF3 1484 aa23.02■■□□□ 1.28
RPS9-212ENST00000495002 CC2D2AQ9P2K1 1620 aa22.81■■□□□ 1.24
RPS9-212ENST00000495002 BAZ1AQ9NRL2 1556 aaPredicted RBP22.76■■□□□ 1.23
RPS9-212ENST00000495002 RSF1Q96T23 1441 aaPredicted RBP22.62■■□□□ 1.21
RPS9-212ENST00000495002 SMARCA4P51532 1647 aa22.59■■□□□ 1.21
RPS9-212ENST00000495002 MROH2BQ7Z745 1585 aa22.55■■□□□ 1.2
RPS9-212ENST00000495002 PEG3Q9GZU2 1588 aa22.5■■□□□ 1.19
RPS9-212ENST00000495002 EIF4G1Q04637 1599 aaKnown RBP22.46■■□□□ 1.19
RPS9-212ENST00000495002 SUPT5HO00267 1087 aaKnown RBP22.42■■□□□ 1.18
RPS9-212ENST00000495002 SMARCA2P51531 1590 aa22.39■■□□□ 1.18
RPS9-212ENST00000495002 TRIM41Q8WV44 630 aa22.39■■□□□ 1.17
RPS9-212ENST00000495002 CUX2O14529 1486 aa22.38■■□□□ 1.17
RPS9-212ENST00000495002 ATAD2BQ9ULI0 1458 aa22.3■■□□□ 1.16
RPS9-212ENST00000495002 WIZO95785 1651 aa22.3■■□□□ 1.16
RPS9-212ENST00000495002 NCAPD3P42695 1498 aa22.27■■□□□ 1.16
RPS9-212ENST00000495002 TOP2AP11388 1531 aaKnown RBP22.23■■□□□ 1.15
RPS9-212ENST00000495002 HMGXB3Q12766 1538 aa22.23■■□□□ 1.15
RPS9-212ENST00000495002 BAZ1BQ9UIG0 1483 aaKnown RBP22.15■■□□□ 1.14
RPS9-212ENST00000495002 ERCC6Q03468 1493 aa22.09■■□□□ 1.13
RPS9-212ENST00000495002 CCDC88BA6NC98 1476 aa21.92■■□□□ 1.1
RPS9-212ENST00000495002 CFTRP13569 1480 aa21.65■■□□□ 1.06
RPS9-212ENST00000495002 CADPSQ9ULU8 1353 aa21.61■■□□□ 1.05
RPS9-212ENST00000495002 LAMC3Q9Y6N6 1575 aa21.55■■□□□ 1.04
RPS9-212ENST00000495002 PRDM2Q13029 1718 aa21.5■■□□□ 1.03
RPS9-212ENST00000495002 CHIC1Q5VXU3 224 aa21.48■■□□□ 1.03
RPS9-212ENST00000495002 AEBP2Q6ZN18 517 aaPredicted RBP21.45■■□□□ 1.02
RPS9-212ENST00000495002 NESP48681 1621 aa21.42■■□□□ 1.02
RPS9-212ENST00000495002 PDS5BQ9NTI5 1447 aa21.38■■□□□ 1.01
RPS9-212ENST00000495002 THOC2Q8NI27 1593 aaKnown RBP21.38■■□□□ 1.01
RPS9-212ENST00000495002 WRNQ14191 1432 aaPredicted RBP eCLIP21.33■■□□□ 1.01
RPS9-212ENST00000495002 FANCD2Q9BXW9 1451 aa21.3■■□□□ 1
RPS9-212ENST00000495002 OSCARQ8IYS5 282 aa21.27■■□□□ 1
RPS9-212ENST00000495002 ABCC8Q09428 1581 aa21.27■□□□□ 0.99
RPS9-212ENST00000495002 CEP164Q9UPV0 1460 aa21.23■□□□□ 0.99
RPS9-212ENST00000495002 TOP2BQ02880 1626 aa21.22■□□□□ 0.99
RPS9-212ENST00000495002 BIVM-ERCC5R4GMW8 1640 aa21.2■□□□□ 0.98
RPS9-212ENST00000495002 SYNJ1O43426 1573 aa21.14■□□□□ 0.97
RPS9-212ENST00000495002 DNMBPQ6XZF7 1577 aa21.12■□□□□ 0.97
RPS9-212ENST00000495002 CUX1P39880 1505 aa21.12■□□□□ 0.97
RPS9-212ENST00000495002 TRHP20396 242 aaPredicted RBP21.11■□□□□ 0.97
RPS9-212ENST00000495002 EEA1Q15075 1411 aa21.07■□□□□ 0.96
RPS9-212ENST00000495002 KIF21AQ7Z4S6 1674 aa21.06■□□□□ 0.96
RPS9-212ENST00000495002 MRC2Q9UBG0 1479 aa21.05■□□□□ 0.96
RPS9-212ENST00000495002 TOPBP1Q92547 1522 aa21.04■□□□□ 0.96
RPS9-212ENST00000495002 URB2Q14146 1524 aaKnown RBP21■□□□□ 0.95
RPS9-212ENST00000495002 WDR62O43379 1518 aa20.98■□□□□ 0.95
RPS9-212ENST00000495002 RIMBP3CA6NJZ7 1639 aa20.97■□□□□ 0.95
RPS9-212ENST00000495002 RIMBP3BA6NNM3 1639 aa20.97■□□□□ 0.95
RPS9-212ENST00000495002 RIMBP3Q9UFD9 1639 aa20.97■□□□□ 0.95
RPS9-212ENST00000495002 FGD5Q6ZNL6 1462 aa20.94■□□□□ 0.94
RPS9-212ENST00000495002 POLA1P09884 1462 aaPredicted RBP20.91■□□□□ 0.94
RPS9-212ENST00000495002 ABCA10Q8WWZ4 1543 aa20.88■□□□□ 0.93
RPS9-212ENST00000495002 KIF27Q86VH2 1401 aa20.87■□□□□ 0.93
RPS9-212ENST00000495002 CYB5RLQ6IPT4 315 aa20.86■□□□□ 0.93
RPS9-212ENST00000495002 SOGA1O94964 1423 aa20.86■□□□□ 0.93
RPS9-212ENST00000495002 WDR97A6NE52 1622 aa20.84■□□□□ 0.93
RPS9-212ENST00000495002 ARHGEF11O15085 1522 aa20.82■□□□□ 0.92
RPS9-212ENST00000495002 IFT140Q96RY7 1462 aa20.81■□□□□ 0.92
RPS9-212ENST00000495002 CSRNP3Q8WYN3 585 aa20.79■□□□□ 0.92
RPS9-212ENST00000495002 TARBP1Q13395 1621 aaKnown RBP20.76■□□□□ 0.91
RPS9-212ENST00000495002 RAD54L2Q9Y4B4 1467 aa20.71■□□□□ 0.91
RPS9-212ENST00000495002 RUSC2Q8N2Y8 1516 aa20.68■□□□□ 0.9
RPS9-212ENST00000495002 KIF21BO75037 1637 aa20.67■□□□□ 0.9
RPS9-212ENST00000495002 ERICH3Q5RHP9 1530 aa20.67■□□□□ 0.9
RPS9-212ENST00000495002 ABCA5Q8WWZ7 1642 aa20.67■□□□□ 0.9
RPS9-212ENST00000495002 ILDR1Q86SU0 546 aaPredicted RBP20.66■□□□□ 0.9
RPS9-212ENST00000495002 PRXQ9BXM0 1461 aa20.65■□□□□ 0.9
RPS9-212ENST00000495002 IGF1RP08069 1367 aa20.65■□□□□ 0.9
RPS9-212ENST00000495002 GAPVD1Q14C86 1478 aa20.63■□□□□ 0.89
RPS9-212ENST00000495002 FAM9AQ8IZU1 332 aaPredicted RBP20.62■□□□□ 0.89
RPS9-212ENST00000495002 GOLGA3Q08378 1498 aa20.6■□□□□ 0.89
RPS9-212ENST00000495002 CUL7Q14999 1698 aa20.6■□□□□ 0.89
RPS9-212ENST00000495002 GRIN2BQ13224 1484 aa20.56■□□□□ 0.88
RPS9-212ENST00000495002 TDRD9Q8NDG6 1382 aaKnown RBP20.56■□□□□ 0.88
RPS9-212ENST00000495002 CARMIL1Q5VZK9 1371 aa20.54■□□□□ 0.88
RPS9-212ENST00000495002 RAPGEF2Q9Y4G8 1499 aa20.52■□□□□ 0.88
RPS9-212ENST00000495002 TNIKQ9UKE5 1360 aa20.52■□□□□ 0.88
RPS9-212ENST00000495002 ARAP1Q96P48 1450 aa20.51■□□□□ 0.87
RPS9-212ENST00000495002 EIF4G3O43432 1585 aaKnown RBP20.48■□□□□ 0.87
RPS9-212ENST00000495002 ZNF608Q9ULD9 1512 aaPredicted RBP20.48■□□□□ 0.87
RPS9-212ENST00000495002 FHAD1B1AJZ9 1412 aa20.47■□□□□ 0.87
RPS9-212ENST00000495002 AQRO60306 1485 aaKnown RBP eCLIP20.47■□□□□ 0.875e-10■■■■■ 40.3
RPS9-212ENST00000495002 MAGI1Q96QZ7 1491 aaPredicted RBP20.47■□□□□ 0.87
RPS9-212ENST00000495002 PBRM1Q86U86 1689 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms