RNA–Protein interactions for RNA: ENST00000466588.5

GAPDH-207, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 5

Gene GAPDH, Length 1,363 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-207ENST00000466588 NISCHQ9Y2I1 1504 aa27.52■■■□□ 2
GAPDH-207ENST00000466588 ABCC9O60706 1549 aa24.93■■□□□ 1.58
GAPDH-207ENST00000466588 CCDC180Q9P1Z9 1646 aa24.8■■□□□ 1.56
GAPDH-207ENST00000466588 RB1CC1Q8TDY2 1594 aa23.68■■□□□ 1.38
GAPDH-207ENST00000466588 DNAJC5BQ9UF47 199 aa23.53■■□□□ 1.36
GAPDH-207ENST00000466588 NACADO15069 1562 aa23.47■■□□□ 1.35
GAPDH-207ENST00000466588 DCAF8L2P0C7V8 631 aa23.17■■□□□ 1.3
GAPDH-207ENST00000466588 PABPN1Q86U42 306 aaKnown RBP eCLIP23.14■■□□□ 1.29
GAPDH-207ENST00000466588 MYO15BQ96JP2 1530 aa23.13■■□□□ 1.29
GAPDH-207ENST00000466588 UNC13AQ9UPW8 1703 aa23.1■■□□□ 1.29
GAPDH-207ENST00000466588 BICRAQ9NZM4 1560 aa23.01■■□□□ 1.27
GAPDH-207ENST00000466588 ZCCHC6Q5VYS8 1495 aaKnown RBP22.8■■□□□ 1.24
GAPDH-207ENST00000466588 DCAF1Q9Y4B6 1507 aa22.76■■□□□ 1.23
GAPDH-207ENST00000466588 SHROOM4Q9ULL8 1493 aa22.72■■□□□ 1.23
GAPDH-207ENST00000466588 SCRIBQ14160 1630 aa22.55■■□□□ 1.2
GAPDH-207ENST00000466588 CC2D2AQ9P2K1 1620 aa22.53■■□□□ 1.2
GAPDH-207ENST00000466588 CECR2Q9BXF3 1484 aa22.49■■□□□ 1.19
GAPDH-207ENST00000466588 EIF4G1Q04637 1599 aaKnown RBP22.45■■□□□ 1.18
GAPDH-207ENST00000466588 DNAJC5Q9H3Z4 198 aa21.74■■□□□ 1.07
GAPDH-207ENST00000466588 NCAPD3P42695 1498 aa21.68■■□□□ 1.06
GAPDH-207ENST00000466588 CUX2O14529 1486 aa21.6■■□□□ 1.05
GAPDH-207ENST00000466588 ATAD2BQ9ULI0 1458 aa21.58■■□□□ 1.04
GAPDH-207ENST00000466588 ERCC6Q03468 1493 aa21.54■■□□□ 1.04
GAPDH-207ENST00000466588 HMGXB3Q12766 1538 aa21.52■■□□□ 1.04
GAPDH-207ENST00000466588 SMARCA4P51532 1647 aa21.51■■□□□ 1.03
GAPDH-207ENST00000466588 SMARCA2P51531 1590 aa21.51■■□□□ 1.03
GAPDH-207ENST00000466588 BAZ1AQ9NRL2 1556 aaPredicted RBP21.38■■□□□ 1.01
GAPDH-207ENST00000466588 NESP48681 1621 aa21.37■■□□□ 1.01
GAPDH-207ENST00000466588 BAZ1BQ9UIG0 1483 aaKnown RBP21.35■■□□□ 1.01
GAPDH-207ENST00000466588 PEG3Q9GZU2 1588 aa21.34■■□□□ 1.01
GAPDH-207ENST00000466588 THOC2Q8NI27 1593 aaKnown RBP21.24■□□□□ 0.99
GAPDH-207ENST00000466588 LAMC3Q9Y6N6 1575 aa21.22■□□□□ 0.99
GAPDH-207ENST00000466588 MROH2BQ7Z745 1585 aa21.19■□□□□ 0.98
GAPDH-207ENST00000466588 KIF21AQ7Z4S6 1674 aa21.09■□□□□ 0.97
GAPDH-207ENST00000466588 PDS5BQ9NTI5 1447 aa21.08■□□□□ 0.97
GAPDH-207ENST00000466588 CADPSQ9ULU8 1353 aa20.99■□□□□ 0.95
GAPDH-207ENST00000466588 MRC2Q9UBG0 1479 aa20.93■□□□□ 0.94
GAPDH-207ENST00000466588 WDR62O43379 1518 aa20.91■□□□□ 0.94
GAPDH-207ENST00000466588 WIZO95785 1651 aa20.91■□□□□ 0.94
GAPDH-207ENST00000466588 CEP164Q9UPV0 1460 aa20.8■□□□□ 0.92
GAPDH-207ENST00000466588 FANCD2Q9BXW9 1451 aa20.76■□□□□ 0.91
GAPDH-207ENST00000466588 CFTRP13569 1480 aa20.73■□□□□ 0.91
GAPDH-207ENST00000466588 RSF1Q96T23 1441 aaPredicted RBP20.68■□□□□ 0.9
GAPDH-207ENST00000466588 TRIM41Q8WV44 630 aa20.68■□□□□ 0.9
GAPDH-207ENST00000466588 TOP2AP11388 1531 aaKnown RBP20.68■□□□□ 0.9
GAPDH-207ENST00000466588 URB2Q14146 1524 aaKnown RBP20.61■□□□□ 0.89
GAPDH-207ENST00000466588 OSCARQ8IYS5 282 aa20.5■□□□□ 0.87
GAPDH-207ENST00000466588 PRDM2Q13029 1718 aa20.47■□□□□ 0.87
GAPDH-207ENST00000466588 AEBP2Q6ZN18 517 aaPredicted RBP20.46■□□□□ 0.87
GAPDH-207ENST00000466588 CCDC88BA6NC98 1476 aa20.41■□□□□ 0.86
GAPDH-207ENST00000466588 IFT140Q96RY7 1462 aa20.4■□□□□ 0.86
GAPDH-207ENST00000466588 ZNF608Q9ULD9 1512 aaPredicted RBP20.37■□□□□ 0.85
GAPDH-207ENST00000466588 TOPBP1Q92547 1522 aa20.34■□□□□ 0.85
GAPDH-207ENST00000466588 RIMBP3CA6NJZ7 1639 aa20.31■□□□□ 0.84
GAPDH-207ENST00000466588 RIMBP3BA6NNM3 1639 aa20.31■□□□□ 0.84
GAPDH-207ENST00000466588 RIMBP3Q9UFD9 1639 aa20.31■□□□□ 0.84
GAPDH-207ENST00000466588 ABCC8Q09428 1581 aa20.28■□□□□ 0.84
GAPDH-207ENST00000466588 EIF4G3O43432 1585 aaKnown RBP20.28■□□□□ 0.84
GAPDH-207ENST00000466588 DNMBPQ6XZF7 1577 aa20.27■□□□□ 0.84
GAPDH-207ENST00000466588 ARHGEF11O15085 1522 aa20.25■□□□□ 0.83
GAPDH-207ENST00000466588 TARBP1Q13395 1621 aaKnown RBP20.2■□□□□ 0.82
GAPDH-207ENST00000466588 AQRO60306 1485 aaKnown RBP eCLIP20.14■□□□□ 0.822e-13■■■■■ 32.6
GAPDH-207ENST00000466588 POLA1P09884 1462 aaPredicted RBP20.13■□□□□ 0.81
GAPDH-207ENST00000466588 CHD1O14646 1710 aa20.12■□□□□ 0.81
GAPDH-207ENST00000466588 ARAP1Q96P48 1450 aa20.04■□□□□ 0.8
GAPDH-207ENST00000466588 RAD54L2Q9Y4B4 1467 aa20.04■□□□□ 0.8
GAPDH-207ENST00000466588 CYB5RLQ6IPT4 315 aa20.03■□□□□ 0.8
GAPDH-207ENST00000466588 SOGA1O94964 1423 aa19.99■□□□□ 0.79
GAPDH-207ENST00000466588 WDR97A6NE52 1622 aa19.99■□□□□ 0.79
GAPDH-207ENST00000466588 FBLN2P98095 1184 aa19.98■□□□□ 0.79
GAPDH-207ENST00000466588 TDRD9Q8NDG6 1382 aaKnown RBP19.98■□□□□ 0.79
GAPDH-207ENST00000466588 FGD5Q6ZNL6 1462 aa19.97■□□□□ 0.79
GAPDH-207ENST00000466588 SNAPC4Q5SXM2 1469 aa19.96■□□□□ 0.79
GAPDH-207ENST00000466588 CLASP1Q7Z460 1538 aa19.94■□□□□ 0.78
GAPDH-207ENST00000466588 CUX1P39880 1505 aa19.93■□□□□ 0.78
GAPDH-207ENST00000466588 MAGI1Q96QZ7 1491 aaPredicted RBP19.9■□□□□ 0.78
GAPDH-207ENST00000466588 GRIN2BQ13224 1484 aa19.88■□□□□ 0.77
GAPDH-207ENST00000466588 SYNJ1O43426 1573 aa19.88■□□□□ 0.77
GAPDH-207ENST00000466588 TRHP20396 242 aaPredicted RBP19.85■□□□□ 0.77
GAPDH-207ENST00000466588 SYNJ2O15056 1496 aa19.84■□□□□ 0.77
GAPDH-207ENST00000466588 CHMP7Q8WUX9 453 aaPredicted RBP19.83■□□□□ 0.77
GAPDH-207ENST00000466588 PBRM1Q86U86 1689 aa19.78■□□□□ 0.76
GAPDH-207ENST00000466588 GAPVD1Q14C86 1478 aa19.77■□□□□ 0.76
GAPDH-207ENST00000466588 ABCA10Q8WWZ4 1543 aa19.75■□□□□ 0.75
GAPDH-207ENST00000466588 ABCA5Q8WWZ7 1642 aa19.75■□□□□ 0.75
GAPDH-207ENST00000466588 GRIN2AQ12879 1464 aa19.63■□□□□ 0.73
GAPDH-207ENST00000466588 ADAMTS12P58397 1594 aa19.61■□□□□ 0.73
GAPDH-207ENST00000466588 WRNQ14191 1432 aaPredicted RBP eCLIP19.61■□□□□ 0.73
GAPDH-207ENST00000466588 ERCC6L2Q5T890 1561 aa19.58■□□□□ 0.73
GAPDH-207ENST00000466588 NUP160Q12769 1436 aa19.58■□□□□ 0.73
GAPDH-207ENST00000466588 BIVM-ERCC5R4GMW8 1640 aa19.57■□□□□ 0.72
GAPDH-207ENST00000466588 CEP170Q5SW79 1584 aa19.57■□□□□ 0.72
GAPDH-207ENST00000466588 TOP2BQ02880 1626 aa19.56■□□□□ 0.72
GAPDH-207ENST00000466588 SUPT5HO00267 1087 aaKnown RBP19.56■□□□□ 0.72
GAPDH-207ENST00000466588 FHAD1B1AJZ9 1412 aa19.52■□□□□ 0.72
GAPDH-207ENST00000466588 SHROOM2Q13796 1616 aa19.52■□□□□ 0.72
GAPDH-207ENST00000466588 ERICH3Q5RHP9 1530 aa19.5■□□□□ 0.71
GAPDH-207ENST00000466588 PRG4Q92954 1404 aaPredicted RBP19.37■□□□□ 0.69
GAPDH-207ENST00000466588 RUSC2Q8N2Y8 1516 aa19.35■□□□□ 0.69
GAPDH-207ENST00000466588 KIF13AQ9H1H9 1805 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms