RNA–Protein interactions for RNA: ENST00000573583.2

SRRM2-216, Transcript of serine/arginine repetitive matrix 2, humanhuman

TSL 4

Gene SRRM2, Length 543 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM2-216ENST00000573583 NISCHQ9Y2I1 1504 aa21.47■■□□□ 1.03
SRRM2-216ENST00000573583 CCDC180Q9P1Z9 1646 aa18.57■□□□□ 0.56
SRRM2-216ENST00000573583 ZCCHC6Q5VYS8 1495 aaKnown RBP18.19■□□□□ 0.5
SRRM2-216ENST00000573583 DCAF1Q9Y4B6 1507 aa17.88■□□□□ 0.45
SRRM2-216ENST00000573583 SHROOM4Q9ULL8 1493 aa17.8■□□□□ 0.44
SRRM2-216ENST00000573583 ABCC9O60706 1549 aa17.6■□□□□ 0.41
SRRM2-216ENST00000573583 SUPT5HO00267 1087 aaKnown RBP17.53■□□□□ 0.4
SRRM2-216ENST00000573583 MYO15BQ96JP2 1530 aa17.45■□□□□ 0.38
SRRM2-216ENST00000573583 DCAF8L2P0C7V8 631 aa17.38■□□□□ 0.37
SRRM2-216ENST00000573583 AEBP2Q6ZN18 517 aaPredicted RBP17.26■□□□□ 0.35
SRRM2-216ENST00000573583 CHIC1Q5VXU3 224 aa17.16■□□□□ 0.34
SRRM2-216ENST00000573583 NACADO15069 1562 aa17.1■□□□□ 0.33
SRRM2-216ENST00000573583 SCRIBQ14160 1630 aa16.98■□□□□ 0.31
SRRM2-216ENST00000573583 RB1CC1Q8TDY2 1594 aa16.98■□□□□ 0.31
SRRM2-216ENST00000573583 RSF1Q96T23 1441 aaPredicted RBP16.85■□□□□ 0.29
SRRM2-216ENST00000573583 HRCP23327 699 aa16.7■□□□□ 0.26
SRRM2-216ENST00000573583 BAZ1AQ9NRL2 1556 aaPredicted RBP16.62■□□□□ 0.25
SRRM2-216ENST00000573583 TRIM41Q8WV44 630 aa16.56■□□□□ 0.24
SRRM2-216ENST00000573583 UNC13AQ9UPW8 1703 aa16.53■□□□□ 0.24
SRRM2-216ENST00000573583 PCGF6Q9BYE7 350 aa16.53■□□□□ 0.24
SRRM2-216ENST00000573583 MROH2BQ7Z745 1585 aa16.51■□□□□ 0.23
SRRM2-216ENST00000573583 TRIM26Q12899 539 aaPredicted RBP16.51■□□□□ 0.23
SRRM2-216ENST00000573583 CECR2Q9BXF3 1484 aa16.47■□□□□ 0.23
SRRM2-216ENST00000573583 WIZO95785 1651 aa16.46■□□□□ 0.23
SRRM2-216ENST00000573583 LOC105371045A0A1W2PR82 267 aa16.42■□□□□ 0.22
SRRM2-216ENST00000573583 TOP2AP11388 1531 aaKnown RBP16.41■□□□□ 0.22
SRRM2-216ENST00000573583 ZEB1P37275 1124 aaPredicted RBP16.41■□□□□ 0.22
SRRM2-216ENST00000573583 BICRAQ9NZM4 1560 aa16.41■□□□□ 0.22
SRRM2-216ENST00000573583 SMARCA4P51532 1647 aa16.38■□□□□ 0.21
SRRM2-216ENST00000573583 PABPN1Q86U42 306 aaKnown RBP eCLIP16.34■□□□□ 0.213e-32■□□□□ 8.8
SRRM2-216ENST00000573583 EIF4G1Q04637 1599 aaKnown RBP16.34■□□□□ 0.21
SRRM2-216ENST00000573583 DNAJC5BQ9UF47 199 aa16.28■□□□□ 0.2
SRRM2-216ENST00000573583 EEA1Q15075 1411 aa16.24■□□□□ 0.19
SRRM2-216ENST00000573583 SMARCA2P51531 1590 aa16.21■□□□□ 0.19
SRRM2-216ENST00000573583 PEG3Q9GZU2 1588 aa16.21■□□□□ 0.18
SRRM2-216ENST00000573583 CCDC88BA6NC98 1476 aa16.15■□□□□ 0.18
SRRM2-216ENST00000573583 FAM9AQ8IZU1 332 aaPredicted RBP16.11■□□□□ 0.17
SRRM2-216ENST00000573583 WRNQ14191 1432 aaPredicted RBP eCLIP16.04■□□□□ 0.16
SRRM2-216ENST00000573583 ABCC8Q09428 1581 aa15.99■□□□□ 0.15
SRRM2-216ENST00000573583 TNIKQ9UKE5 1360 aa15.99■□□□□ 0.15
SRRM2-216ENST00000573583 CC2D2AQ9P2K1 1620 aa15.97■□□□□ 0.15
SRRM2-216ENST00000573583 GOLGA3Q08378 1498 aa15.94■□□□□ 0.14
SRRM2-216ENST00000573583 PPARGC1BQ86YN6 1023 aaKnown RBP15.93■□□□□ 0.14
SRRM2-216ENST00000573583 BAZ1BQ9UIG0 1483 aaKnown RBP15.91■□□□□ 0.14
SRRM2-216ENST00000573583 KIF21BO75037 1637 aa15.9■□□□□ 0.14
SRRM2-216ENST00000573583 CEP162Q5TB80 1403 aa15.9■□□□□ 0.14
SRRM2-216ENST00000573583 CSRNP3Q8WYN3 585 aa15.89■□□□□ 0.13
SRRM2-216ENST00000573583 ATAD2BQ9ULI0 1458 aa15.89■□□□□ 0.13
SRRM2-216ENST00000573583 CEP164Q9UPV0 1460 aa15.88■□□□□ 0.13
SRRM2-216ENST00000573583 SOGA1O94964 1423 aa15.8■□□□□ 0.12
SRRM2-216ENST00000573583 HMGXB3Q12766 1538 aa15.79■□□□□ 0.12
SRRM2-216ENST00000573583 SYNJ1O43426 1573 aa15.75■□□□□ 0.11
SRRM2-216ENST00000573583 UBTFP17480 764 aaKnown RBP15.75■□□□□ 0.11
SRRM2-216ENST00000573583 EHMT2Q96KQ7 1210 aa15.75■□□□□ 0.11
SRRM2-216ENST00000573583 TOP2BQ02880 1626 aa15.75■□□□□ 0.11
SRRM2-216ENST00000573583 BIVM-ERCC5R4GMW8 1640 aa15.74■□□□□ 0.11
SRRM2-216ENST00000573583 CCER1Q8TC90 406 aaPredicted RBP15.72■□□□□ 0.11
SRRM2-216ENST00000573583 NCAPD3P42695 1498 aa15.69■□□□□ 0.1
SRRM2-216ENST00000573583 ERICH3Q5RHP9 1530 aa15.68■□□□□ 0.1
SRRM2-216ENST00000573583 PRDM2Q13029 1718 aa15.66■□□□□ 0.1
SRRM2-216ENST00000573583 CLIP1P30622 1438 aa15.65■□□□□ 0.1
SRRM2-216ENST00000573583 RUSC2Q8N2Y8 1516 aa15.64■□□□□ 0.09
SRRM2-216ENST00000573583 VPS8Q8N3P4 1428 aa15.64■□□□□ 0.09
SRRM2-216ENST00000573583 APLP2Q06481 763 aa15.63■□□□□ 0.09
SRRM2-216ENST00000573583 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.53■□□□□ 0.08
SRRM2-216ENST00000573583 KIF27Q86VH2 1401 aa15.52■□□□□ 0.08
SRRM2-216ENST00000573583 CFTRP13569 1480 aa15.51■□□□□ 0.07
SRRM2-216ENST00000573583 PRXQ9BXM0 1461 aa15.51■□□□□ 0.07
SRRM2-216ENST00000573583 PELP1Q8IZL8 1130 aaKnown RBP15.5■□□□□ 0.07
SRRM2-216ENST00000573583 RAPGEF2Q9Y4G8 1499 aa15.5■□□□□ 0.07
SRRM2-216ENST00000573583 CLSPNQ9HAW4 1339 aa15.45■□□□□ 0.06
SRRM2-216ENST00000573583 CENPBP07199 599 aaPredicted RBP15.44■□□□□ 0.06
SRRM2-216ENST00000573583 CUX1P39880 1505 aa15.43■□□□□ 0.06
SRRM2-216ENST00000573583 DIEXFQ68CQ4 756 aaKnown RBP15.39■□□□□ 0.05
SRRM2-216ENST00000573583 MAP3K1Q13233 1512 aa15.35■□□□□ 0.05
SRRM2-216ENST00000573583 ZNF316A6NFI3 1004 aaPredicted RBP15.35■□□□□ 0.05
SRRM2-216ENST00000573583 ARAP1Q96P48 1450 aa15.33■□□□□ 0.05
SRRM2-216ENST00000573583 TTBK1Q5TCY1 1321 aaPredicted RBP15.32■□□□□ 0.04
SRRM2-216ENST00000573583 CADPSQ9ULU8 1353 aa15.31■□□□□ 0.04
SRRM2-216ENST00000573583 RRBP1Q9P2E9 1410 aaKnown RBP15.28■□□□□ 0.04
SRRM2-216ENST00000573583 ACIN1Q9UKV3 1341 aaKnown RBP15.26■□□□□ 0.03
SRRM2-216ENST00000573583 HNRNPUL2Q1KMD3 747 aaKnown RBP15.24■□□□□ 0.03
SRRM2-216ENST00000573583 CUX2O14529 1486 aa15.24■□□□□ 0.03
SRRM2-216ENST00000573583 FHAD1B1AJZ9 1412 aa15.24■□□□□ 0.03
SRRM2-216ENST00000573583 LAMC3Q9Y6N6 1575 aa15.24■□□□□ 0.03
SRRM2-216ENST00000573583 ERCC6Q03468 1493 aa15.23■□□□□ 0.03
SRRM2-216ENST00000573583 ARHGAP35Q9NRY4 1499 aa15.21■□□□□ 0.03
SRRM2-216ENST00000573583 CUL7Q14999 1698 aa15.21■□□□□ 0.03
SRRM2-216ENST00000573583 DNMBPQ6XZF7 1577 aa15.2■□□□□ 0.02
SRRM2-216ENST00000573583 EFCAB5A4FU69 1503 aa15.2■□□□□ 0.02
SRRM2-216ENST00000573583 FGD5Q6ZNL6 1462 aa15.19■□□□□ 0.02
SRRM2-216ENST00000573583 SCAF1Q9H7N4 1312 aaKnown RBP15.18■□□□□ 0.02
SRRM2-216ENST00000573583 TIAM1Q13009 1591 aa15.17■□□□□ 0.02
SRRM2-216ENST00000573583 CARMIL1Q5VZK9 1371 aa15.17■□□□□ 0.02
SRRM2-216ENST00000573583 IGF1RP08069 1367 aa15.16■□□□□ 0.02
SRRM2-216ENST00000573583 CCNB3Q8WWL7 1395 aa15.16■□□□□ 0.02
SRRM2-216ENST00000573583 CFAP43Q8NDM7 1665 aa15.16■□□□□ 0.02
SRRM2-216ENST00000573583 NESP48681 1621 aa15.15■□□□□ 0.02
SRRM2-216ENST00000573583 FANCD2Q9BXW9 1451 aa15.14■□□□□ 0.01
SRRM2-216ENST00000573583 ABCA10Q8WWZ4 1543 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms