RNA–Protein interactions for RNA: ENST00000492719.5

GAPDH-209, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 3

Gene GAPDH, Length 930 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-209ENST00000492719 NISCHQ9Y2I1 1504 aa33.94■■■■□ 3.02
GAPDH-209ENST00000492719 ABCC9O60706 1549 aa32.22■■■□□ 2.75
GAPDH-209ENST00000492719 DNAJC5BQ9UF47 199 aa31.22■■■□□ 2.59
GAPDH-209ENST00000492719 CCDC180Q9P1Z9 1646 aa31.02■■■□□ 2.56
GAPDH-209ENST00000492719 RB1CC1Q8TDY2 1594 aa30.08■■■□□ 2.41
GAPDH-209ENST00000492719 PABPN1Q86U42 306 aaKnown RBP eCLIP29.79■■■□□ 2.36
GAPDH-209ENST00000492719 UNC13AQ9UPW8 1703 aa29.56■■■□□ 2.32
GAPDH-209ENST00000492719 NACADO15069 1562 aa29.54■■■□□ 2.32
GAPDH-209ENST00000492719 DNAJC5Q9H3Z4 198 aa29.46■■■□□ 2.31
GAPDH-209ENST00000492719 BICRAQ9NZM4 1560 aa29.29■■■□□ 2.28
GAPDH-209ENST00000492719 DCAF8L2P0C7V8 631 aa29.23■■■□□ 2.27
GAPDH-209ENST00000492719 CECR2Q9BXF3 1484 aa29.1■■■□□ 2.25
GAPDH-209ENST00000492719 CC2D2AQ9P2K1 1620 aa29.04■■■□□ 2.24
GAPDH-209ENST00000492719 EIF4G1Q04637 1599 aaKnown RBP28.66■■■□□ 2.18
GAPDH-209ENST00000492719 MYO15BQ96JP2 1530 aa28.65■■■□□ 2.18
GAPDH-209ENST00000492719 SHROOM4Q9ULL8 1493 aa28.62■■■□□ 2.17
GAPDH-209ENST00000492719 SCRIBQ14160 1630 aa28.29■■■□□ 2.12
GAPDH-209ENST00000492719 CUX2O14529 1486 aa28.15■■■□□ 2.1
GAPDH-209ENST00000492719 ERCC6Q03468 1493 aa27.89■■■□□ 2.05
GAPDH-209ENST00000492719 ZCCHC6Q5VYS8 1495 aaKnown RBP27.89■■■□□ 2.05
GAPDH-209ENST00000492719 DCAF1Q9Y4B6 1507 aa27.88■■■□□ 2.05
GAPDH-209ENST00000492719 TRIM41Q8WV44 630 aa27.82■■■□□ 2.04
GAPDH-209ENST00000492719 NESP48681 1621 aa27.36■■□□□ 1.97
GAPDH-209ENST00000492719 THOC2Q8NI27 1593 aaKnown RBP27.31■■□□□ 1.96
GAPDH-209ENST00000492719 NCAPD3P42695 1498 aa27.25■■□□□ 1.95
GAPDH-209ENST00000492719 SMARCA2P51531 1590 aa27.13■■□□□ 1.93
GAPDH-209ENST00000492719 ATAD2BQ9ULI0 1458 aa27.05■■□□□ 1.92
GAPDH-209ENST00000492719 KIF21AQ7Z4S6 1674 aa27.02■■□□□ 1.92
GAPDH-209ENST00000492719 HMGXB3Q12766 1538 aa27■■□□□ 1.91
GAPDH-209ENST00000492719 LAMC3Q9Y6N6 1575 aa26.88■■□□□ 1.89
GAPDH-209ENST00000492719 BAZ1AQ9NRL2 1556 aaPredicted RBP26.86■■□□□ 1.89
GAPDH-209ENST00000492719 SMARCA4P51532 1647 aa26.79■■□□□ 1.88
GAPDH-209ENST00000492719 BAZ1BQ9UIG0 1483 aaKnown RBP26.76■■□□□ 1.87
GAPDH-209ENST00000492719 PDS5BQ9NTI5 1447 aa26.73■■□□□ 1.87
GAPDH-209ENST00000492719 MRC2Q9UBG0 1479 aa26.64■■□□□ 1.86
GAPDH-209ENST00000492719 OSCARQ8IYS5 282 aa26.64■■□□□ 1.86
GAPDH-209ENST00000492719 WDR62O43379 1518 aa26.61■■□□□ 1.85
GAPDH-209ENST00000492719 RIMBP3CA6NJZ7 1639 aa26.58■■□□□ 1.85
GAPDH-209ENST00000492719 RIMBP3BA6NNM3 1639 aa26.58■■□□□ 1.85
GAPDH-209ENST00000492719 RIMBP3Q9UFD9 1639 aa26.58■■□□□ 1.85
GAPDH-209ENST00000492719 PEG3Q9GZU2 1588 aa26.45■■□□□ 1.82
GAPDH-209ENST00000492719 AEBP2Q6ZN18 517 aaPredicted RBP26.4■■□□□ 1.82
GAPDH-209ENST00000492719 CADPSQ9ULU8 1353 aa26.38■■□□□ 1.81
GAPDH-209ENST00000492719 ARHGEF11O15085 1522 aa26.32■■□□□ 1.8
GAPDH-209ENST00000492719 TRHP20396 242 aaPredicted RBP26.3■■□□□ 1.8
GAPDH-209ENST00000492719 CEP164Q9UPV0 1460 aa26.3■■□□□ 1.8
GAPDH-209ENST00000492719 MROH2BQ7Z745 1585 aa26.2■■□□□ 1.78
GAPDH-209ENST00000492719 CYB5RLQ6IPT4 315 aa26.17■■□□□ 1.78
GAPDH-209ENST00000492719 FANCD2Q9BXW9 1451 aa26.16■■□□□ 1.78
GAPDH-209ENST00000492719 URB2Q14146 1524 aaKnown RBP26.04■■□□□ 1.76
GAPDH-209ENST00000492719 ARAP1Q96P48 1450 aa25.99■■□□□ 1.75
GAPDH-209ENST00000492719 ZNF608Q9ULD9 1512 aaPredicted RBP25.93■■□□□ 1.74
GAPDH-209ENST00000492719 WIZO95785 1651 aa25.88■■□□□ 1.73
GAPDH-209ENST00000492719 CHD1O14646 1710 aa25.85■■□□□ 1.73
GAPDH-209ENST00000492719 CFTRP13569 1480 aa25.84■■□□□ 1.73
GAPDH-209ENST00000492719 IFT140Q96RY7 1462 aa25.78■■□□□ 1.72
GAPDH-209ENST00000492719 EIF4G3O43432 1585 aaKnown RBP25.76■■□□□ 1.71
GAPDH-209ENST00000492719 RSF1Q96T23 1441 aaPredicted RBP25.69■■□□□ 1.7
GAPDH-209ENST00000492719 PRDM2Q13029 1718 aa25.65■■□□□ 1.7
GAPDH-209ENST00000492719 FBLN2P98095 1184 aa25.61■■□□□ 1.69
GAPDH-209ENST00000492719 TOPBP1Q92547 1522 aa25.53■■□□□ 1.68
GAPDH-209ENST00000492719 AQRO60306 1485 aaKnown RBP eCLIP25.52■■□□□ 1.682e-13■■■■■ 33.3
GAPDH-209ENST00000492719 ILDR1Q86SU0 546 aaPredicted RBP25.46■■□□□ 1.67
GAPDH-209ENST00000492719 CLASP1Q7Z460 1538 aa25.42■■□□□ 1.66
GAPDH-209ENST00000492719 TARBP1Q13395 1621 aaKnown RBP25.41■■□□□ 1.66
GAPDH-209ENST00000492719 TOP2AP11388 1531 aaKnown RBP25.4■■□□□ 1.66
GAPDH-209ENST00000492719 DNMBPQ6XZF7 1577 aa25.34■■□□□ 1.65
GAPDH-209ENST00000492719 SYNJ1O43426 1573 aa25.29■■□□□ 1.64
GAPDH-209ENST00000492719 ABCC8Q09428 1581 aa25.29■■□□□ 1.64
GAPDH-209ENST00000492719 SNAPC4Q5SXM2 1469 aa25.25■■□□□ 1.63
GAPDH-209ENST00000492719 GAPVD1Q14C86 1478 aa25.22■■□□□ 1.63
GAPDH-209ENST00000492719 POLA1P09884 1462 aaPredicted RBP25.19■■□□□ 1.62
GAPDH-209ENST00000492719 TDRD9Q8NDG6 1382 aaKnown RBP25.17■■□□□ 1.62
GAPDH-209ENST00000492719 RAD54L2Q9Y4B4 1467 aa25.16■■□□□ 1.62
GAPDH-209ENST00000492719 CHMP7Q8WUX9 453 aaPredicted RBP25.16■■□□□ 1.62
GAPDH-209ENST00000492719 CCDC88BA6NC98 1476 aa25.1■■□□□ 1.61
GAPDH-209ENST00000492719 KIF13AQ9H1H9 1805 aa25.1■■□□□ 1.61
GAPDH-209ENST00000492719 MAGI1Q96QZ7 1491 aaPredicted RBP25.06■■□□□ 1.6
GAPDH-209ENST00000492719 SOGA1O94964 1423 aa25.02■■□□□ 1.6
GAPDH-209ENST00000492719 SYNJ2O15056 1496 aa25.01■■□□□ 1.59
GAPDH-209ENST00000492719 ERCC6L2Q5T890 1561 aa25.01■■□□□ 1.59
GAPDH-209ENST00000492719 WDR97A6NE52 1622 aa24.99■■□□□ 1.59
GAPDH-209ENST00000492719 KDM4FA0A1W2PPD8 638 aa24.96■■□□□ 1.59
GAPDH-209ENST00000492719 GRIN2BQ13224 1484 aa24.95■■□□□ 1.58
GAPDH-209ENST00000492719 PBRM1Q86U86 1689 aa24.91■■□□□ 1.58
GAPDH-209ENST00000492719 FGD5Q6ZNL6 1462 aa24.89■■□□□ 1.58
GAPDH-209ENST00000492719 CEP170Q5SW79 1584 aa24.8■■□□□ 1.56
GAPDH-209ENST00000492719 KDM6BO15054 1643 aa24.76■■□□□ 1.55
GAPDH-209ENST00000492719 FAM69CQ0P6D2 419 aa24.7■■□□□ 1.54
GAPDH-209ENST00000492719 CUX1P39880 1505 aa24.68■■□□□ 1.54
GAPDH-209ENST00000492719 TSPOAP1O95153 1857 aa24.67■■□□□ 1.54
GAPDH-209ENST00000492719 ABCC10Q5T3U5 1492 aa24.66■■□□□ 1.54
GAPDH-209ENST00000492719 SHROOM2Q13796 1616 aa24.66■■□□□ 1.54
GAPDH-209ENST00000492719 GRIN2AQ12879 1464 aa24.65■■□□□ 1.54
GAPDH-209ENST00000492719 DIP2BQ9P265 1576 aa24.64■■□□□ 1.54
GAPDH-209ENST00000492719 HECW2Q9P2P5 1572 aa24.63■■□□□ 1.53
GAPDH-209ENST00000492719 ABCA5Q8WWZ7 1642 aa24.62■■□□□ 1.53
GAPDH-209ENST00000492719 NUP160Q12769 1436 aa24.58■■□□□ 1.53
GAPDH-209ENST00000492719 ADAMTS12P58397 1594 aa24.54■■□□□ 1.52
GAPDH-209ENST00000492719 ADGRL1O94910 1474 aa24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms