RNA–Protein interactions for RNA: ENST00000570539.1

SRRM2-202, Transcript of serine/arginine repetitive matrix 2, humanhuman

TSL 2

Gene SRRM2, Length 431 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM2-202ENST00000570539 NISCHQ9Y2I1 1504 aa25.67■■□□□ 1.7
SRRM2-202ENST00000570539 CCDC180Q9P1Z9 1646 aa23.12■■□□□ 1.29
SRRM2-202ENST00000570539 ABCC9O60706 1549 aa22.93■■□□□ 1.26
SRRM2-202ENST00000570539 RB1CC1Q8TDY2 1594 aa22.02■■□□□ 1.12
SRRM2-202ENST00000570539 NACADO15069 1562 aa21.91■■□□□ 1.1
SRRM2-202ENST00000570539 MYO15BQ96JP2 1530 aa21.74■■□□□ 1.07
SRRM2-202ENST00000570539 DCAF8L2P0C7V8 631 aa21.48■■□□□ 1.03
SRRM2-202ENST00000570539 DNAJC5BQ9UF47 199 aa21.47■■□□□ 1.03
SRRM2-202ENST00000570539 DCAF1Q9Y4B6 1507 aa21.38■■□□□ 1.01
SRRM2-202ENST00000570539 SHROOM4Q9ULL8 1493 aa21.32■■□□□ 1
SRRM2-202ENST00000570539 PABPN1Q86U42 306 aaKnown RBP eCLIP21.29■■□□□ 13e-10■■□□□ 13
SRRM2-202ENST00000570539 ZCCHC6Q5VYS8 1495 aaKnown RBP21.28■■□□□ 1
SRRM2-202ENST00000570539 UNC13AQ9UPW8 1703 aa21.26■□□□□ 0.99
SRRM2-202ENST00000570539 BICRAQ9NZM4 1560 aa21.23■□□□□ 0.99
SRRM2-202ENST00000570539 SCRIBQ14160 1630 aa20.84■□□□□ 0.93
SRRM2-202ENST00000570539 EIF4G1Q04637 1599 aaKnown RBP20.77■□□□□ 0.92
SRRM2-202ENST00000570539 CECR2Q9BXF3 1484 aa20.77■□□□□ 0.92
SRRM2-202ENST00000570539 CC2D2AQ9P2K1 1620 aa20.77■□□□□ 0.92
SRRM2-202ENST00000570539 NCAPD3P42695 1498 aa20.22■□□□□ 0.83
SRRM2-202ENST00000570539 SMARCA2P51531 1590 aa20.09■□□□□ 0.81
SRRM2-202ENST00000570539 HMGXB3Q12766 1538 aa20.07■□□□□ 0.8
SRRM2-202ENST00000570539 ATAD2BQ9ULI0 1458 aa20.05■□□□□ 0.8
SRRM2-202ENST00000570539 CUX2O14529 1486 aa20.04■□□□□ 0.8
SRRM2-202ENST00000570539 BAZ1AQ9NRL2 1556 aaPredicted RBP20■□□□□ 0.79
SRRM2-202ENST00000570539 SMARCA4P51532 1647 aa19.99■□□□□ 0.79
SRRM2-202ENST00000570539 DNAJC5Q9H3Z4 198 aa19.97■□□□□ 0.79
SRRM2-202ENST00000570539 PEG3Q9GZU2 1588 aa19.93■□□□□ 0.78
SRRM2-202ENST00000570539 ERCC6Q03468 1493 aa19.92■□□□□ 0.78
SRRM2-202ENST00000570539 BAZ1BQ9UIG0 1483 aaKnown RBP19.87■□□□□ 0.77
SRRM2-202ENST00000570539 LAMC3Q9Y6N6 1575 aa19.75■□□□□ 0.75
SRRM2-202ENST00000570539 PDS5BQ9NTI5 1447 aa19.68■□□□□ 0.74
SRRM2-202ENST00000570539 MROH2BQ7Z745 1585 aa19.66■□□□□ 0.74
SRRM2-202ENST00000570539 NESP48681 1621 aa19.65■□□□□ 0.74
SRRM2-202ENST00000570539 THOC2Q8NI27 1593 aaKnown RBP19.57■□□□□ 0.72
SRRM2-202ENST00000570539 CADPSQ9ULU8 1353 aa19.57■□□□□ 0.72
SRRM2-202ENST00000570539 MRC2Q9UBG0 1479 aa19.42■□□□□ 0.7
SRRM2-202ENST00000570539 KIF21AQ7Z4S6 1674 aa19.4■□□□□ 0.7
SRRM2-202ENST00000570539 WDR62O43379 1518 aa19.38■□□□□ 0.69
SRRM2-202ENST00000570539 WIZO95785 1651 aa19.36■□□□□ 0.69
SRRM2-202ENST00000570539 CFTRP13569 1480 aa19.34■□□□□ 0.69
SRRM2-202ENST00000570539 CEP164Q9UPV0 1460 aa19.34■□□□□ 0.69
SRRM2-202ENST00000570539 RSF1Q96T23 1441 aaPredicted RBP19.32■□□□□ 0.68
SRRM2-202ENST00000570539 TOP2AP11388 1531 aaKnown RBP19.29■□□□□ 0.68
SRRM2-202ENST00000570539 FANCD2Q9BXW9 1451 aa19.28■□□□□ 0.68
SRRM2-202ENST00000570539 AEBP2Q6ZN18 517 aaPredicted RBP19.09■□□□□ 0.65
SRRM2-202ENST00000570539 URB2Q14146 1524 aaKnown RBP19.06■□□□□ 0.64
SRRM2-202ENST00000570539 ABCC8Q09428 1581 aa19.06■□□□□ 0.64
SRRM2-202ENST00000570539 OSCARQ8IYS5 282 aa19.05■□□□□ 0.64
SRRM2-202ENST00000570539 PRDM2Q13029 1718 aa19.05■□□□□ 0.64
SRRM2-202ENST00000570539 IFT140Q96RY7 1462 aa19.01■□□□□ 0.63
SRRM2-202ENST00000570539 CCDC88BA6NC98 1476 aa19■□□□□ 0.63
SRRM2-202ENST00000570539 TOPBP1Q92547 1522 aa18.9■□□□□ 0.62
SRRM2-202ENST00000570539 TRIM41Q8WV44 630 aa18.87■□□□□ 0.61
SRRM2-202ENST00000570539 DNMBPQ6XZF7 1577 aa18.86■□□□□ 0.61
SRRM2-202ENST00000570539 ZNF608Q9ULD9 1512 aaPredicted RBP18.78■□□□□ 0.6
SRRM2-202ENST00000570539 WDR97A6NE52 1622 aa18.76■□□□□ 0.59
SRRM2-202ENST00000570539 EIF4G3O43432 1585 aaKnown RBP18.72■□□□□ 0.59
SRRM2-202ENST00000570539 TARBP1Q13395 1621 aaKnown RBP18.71■□□□□ 0.58
SRRM2-202ENST00000570539 POLA1P09884 1462 aaPredicted RBP18.7■□□□□ 0.58
SRRM2-202ENST00000570539 ARHGEF11O15085 1522 aa18.66■□□□□ 0.58
SRRM2-202ENST00000570539 RIMBP3CA6NJZ7 1639 aa18.66■□□□□ 0.58
SRRM2-202ENST00000570539 RIMBP3BA6NNM3 1639 aa18.66■□□□□ 0.58
SRRM2-202ENST00000570539 RIMBP3Q9UFD9 1639 aa18.66■□□□□ 0.58
SRRM2-202ENST00000570539 SOGA1O94964 1423 aa18.64■□□□□ 0.57
SRRM2-202ENST00000570539 AQRO60306 1485 aaKnown RBP eCLIP18.62■□□□□ 0.57
SRRM2-202ENST00000570539 MAGI1Q96QZ7 1491 aaPredicted RBP18.58■□□□□ 0.57
SRRM2-202ENST00000570539 FGD5Q6ZNL6 1462 aa18.55■□□□□ 0.56
SRRM2-202ENST00000570539 GRIN2BQ13224 1484 aa18.53■□□□□ 0.56
SRRM2-202ENST00000570539 RAD54L2Q9Y4B4 1467 aa18.52■□□□□ 0.56
SRRM2-202ENST00000570539 CHD1O14646 1710 aa18.52■□□□□ 0.55
SRRM2-202ENST00000570539 TDRD9Q8NDG6 1382 aaKnown RBP18.51■□□□□ 0.55
SRRM2-202ENST00000570539 CUX1P39880 1505 aa18.5■□□□□ 0.55
SRRM2-202ENST00000570539 FBLN2P98095 1184 aa18.49■□□□□ 0.55
SRRM2-202ENST00000570539 SYNJ1O43426 1573 aa18.49■□□□□ 0.55
SRRM2-202ENST00000570539 SNAPC4Q5SXM2 1469 aa18.48■□□□□ 0.55
SRRM2-202ENST00000570539 CHMP7Q8WUX9 453 aaPredicted RBP18.48■□□□□ 0.55
SRRM2-202ENST00000570539 SYNJ2O15056 1496 aa18.47■□□□□ 0.55
SRRM2-202ENST00000570539 CYB5RLQ6IPT4 315 aa18.46■□□□□ 0.55
SRRM2-202ENST00000570539 ARAP1Q96P48 1450 aa18.45■□□□□ 0.54
SRRM2-202ENST00000570539 CLASP1Q7Z460 1538 aa18.44■□□□□ 0.54
SRRM2-202ENST00000570539 ABCA10Q8WWZ4 1543 aa18.44■□□□□ 0.54
SRRM2-202ENST00000570539 GAPVD1Q14C86 1478 aa18.42■□□□□ 0.54
SRRM2-202ENST00000570539 WRNQ14191 1432 aaPredicted RBP eCLIP18.38■□□□□ 0.53
SRRM2-202ENST00000570539 ABCA5Q8WWZ7 1642 aa18.34■□□□□ 0.53
SRRM2-202ENST00000570539 PBRM1Q86U86 1689 aa18.31■□□□□ 0.52
SRRM2-202ENST00000570539 TOP2BQ02880 1626 aa18.27■□□□□ 0.52
SRRM2-202ENST00000570539 TRHP20396 242 aaPredicted RBP18.27■□□□□ 0.52
SRRM2-202ENST00000570539 SUPT5HO00267 1087 aaKnown RBP18.26■□□□□ 0.51
SRRM2-202ENST00000570539 BIVM-ERCC5R4GMW8 1640 aa18.26■□□□□ 0.51
SRRM2-202ENST00000570539 GRIN2AQ12879 1464 aa18.25■□□□□ 0.51
SRRM2-202ENST00000570539 FHAD1B1AJZ9 1412 aa18.24■□□□□ 0.51
SRRM2-202ENST00000570539 NUP160Q12769 1436 aa18.23■□□□□ 0.51
SRRM2-202ENST00000570539 ERICH3Q5RHP9 1530 aa18.23■□□□□ 0.51
SRRM2-202ENST00000570539 ADAMTS12P58397 1594 aa18.2■□□□□ 0.5
SRRM2-202ENST00000570539 SHROOM2Q13796 1616 aa18.12■□□□□ 0.49
SRRM2-202ENST00000570539 CEP170Q5SW79 1584 aa18.09■□□□□ 0.49
SRRM2-202ENST00000570539 JPH4Q96JJ6 628 aa18.01■□□□□ 0.47
SRRM2-202ENST00000570539 KIF27Q86VH2 1401 aa17.98■□□□□ 0.47
SRRM2-202ENST00000570539 PRG4Q92954 1404 aaPredicted RBP17.98■□□□□ 0.47
SRRM2-202ENST00000570539 ERCC6L2Q5T890 1561 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms