RNA–Protein interactions for RNA: ENST00000550991.5

PPP1CC-206, Transcript of protein phosphatase 1 catalytic subunit gamma, humanhuman

TSL 2 BASIC

Gene PPP1CC, Length 1,882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CC-206ENST00000550991 NISCHQ9Y2I1 1504 aa55.37■■■■■ 6.45
PPP1CC-206ENST00000550991 CCDC180Q9P1Z9 1646 aa48.81■■■■■ 5.4
PPP1CC-206ENST00000550991 ABCC9O60706 1549 aa47.12■■■■■ 5.13
PPP1CC-206ENST00000550991 ZCCHC6Q5VYS8 1495 aaKnown RBP46.28■■■■■ 5
PPP1CC-206ENST00000550991 DCAF8L2P0C7V8 631 aa46.1■■■■■ 4.97
PPP1CC-206ENST00000550991 DCAF1Q9Y4B6 1507 aa45.78■■■■■ 4.92
PPP1CC-206ENST00000550991 NACADO15069 1562 aa45.72■■■■■ 4.91
PPP1CC-206ENST00000550991 MYO15BQ96JP2 1530 aa45.65■■■■■ 4.9
PPP1CC-206ENST00000550991 RB1CC1Q8TDY2 1594 aa45.59■■■■■ 4.89
PPP1CC-206ENST00000550991 SCRIBQ14160 1630 aa44.72■■■■■ 4.75
PPP1CC-206ENST00000550991 UNC13AQ9UPW8 1703 aa44.6■■■■■ 4.73
PPP1CC-206ENST00000550991 SHROOM4Q9ULL8 1493 aa44.39■■■■■ 4.7
PPP1CC-206ENST00000550991 PABPN1Q86U42 306 aaKnown RBP eCLIP44.21■■■■■ 4.67
PPP1CC-206ENST00000550991 BICRAQ9NZM4 1560 aa44.2■■■■■ 4.67
PPP1CC-206ENST00000550991 CECR2Q9BXF3 1484 aa43.1■■■■■ 4.49
PPP1CC-206ENST00000550991 EIF4G1Q04637 1599 aaKnown RBP42.98■■■■■ 4.47
PPP1CC-206ENST00000550991 BAZ1AQ9NRL2 1556 aaPredicted RBP42.85■■■■■ 4.45
PPP1CC-206ENST00000550991 SMARCA4P51532 1647 aa42.8■■■■■ 4.44
PPP1CC-206ENST00000550991 MROH2BQ7Z745 1585 aa42.72■■■■■ 4.43
PPP1CC-206ENST00000550991 CC2D2AQ9P2K1 1620 aa42.61■■■■■ 4.41
PPP1CC-206ENST00000550991 DNAJC5BQ9UF47 199 aa42.53■■■■■ 4.4
PPP1CC-206ENST00000550991 RSF1Q96T23 1441 aaPredicted RBP42.52■■■■■ 4.4
PPP1CC-206ENST00000550991 ATAD2BQ9ULI0 1458 aa42.36■■■■■ 4.37
PPP1CC-206ENST00000550991 SMARCA2P51531 1590 aa42.33■■■■■ 4.37
PPP1CC-206ENST00000550991 WIZO95785 1651 aa42.32■■■■■ 4.37
PPP1CC-206ENST00000550991 PEG3Q9GZU2 1588 aa42.31■■■■■ 4.36
PPP1CC-206ENST00000550991 NCAPD3P42695 1498 aa42.19■■■■■ 4.34
PPP1CC-206ENST00000550991 SUPT5HO00267 1087 aaKnown RBP42.17■■■■■ 4.34
PPP1CC-206ENST00000550991 BAZ1BQ9UIG0 1483 aaKnown RBP42.08■■■■■ 4.33
PPP1CC-206ENST00000550991 HMGXB3Q12766 1538 aa42.04■■■■■ 4.32
PPP1CC-206ENST00000550991 TOP2AP11388 1531 aaKnown RBP41.86■■■■■ 4.29
PPP1CC-206ENST00000550991 CCDC88BA6NC98 1476 aa41.41■■■■■ 4.22
PPP1CC-206ENST00000550991 CADPSQ9ULU8 1353 aa41.04■■■■■ 4.16
PPP1CC-206ENST00000550991 NESP48681 1621 aa41.02■■■■■ 4.16
PPP1CC-206ENST00000550991 CFTRP13569 1480 aa40.95■■■■■ 4.15
PPP1CC-206ENST00000550991 LAMC3Q9Y6N6 1575 aa40.94■■■■■ 4.15
PPP1CC-206ENST00000550991 PRDM2Q13029 1718 aa40.68■■■■■ 4.1
PPP1CC-206ENST00000550991 PDS5BQ9NTI5 1447 aa40.67■■■■■ 4.1
PPP1CC-206ENST00000550991 FANCD2Q9BXW9 1451 aa40.58■■■■■ 4.09
PPP1CC-206ENST00000550991 ERCC6Q03468 1493 aa40.53■■■■■ 4.08
PPP1CC-206ENST00000550991 KIF21AQ7Z4S6 1674 aa40.52■■■■■ 4.08
PPP1CC-206ENST00000550991 CEP164Q9UPV0 1460 aa40.44■■■■■ 4.06
PPP1CC-206ENST00000550991 MRC2Q9UBG0 1479 aa40.2■■■■■ 4.03
PPP1CC-206ENST00000550991 ABCC8Q09428 1581 aa40.18■■■■■ 4.02
PPP1CC-206ENST00000550991 THOC2Q8NI27 1593 aaKnown RBP40.15■■■■■ 4.02
PPP1CC-206ENST00000550991 URB2Q14146 1524 aaKnown RBP40.12■■■■■ 4.01
PPP1CC-206ENST00000550991 WRNQ14191 1432 aaPredicted RBP eCLIP40.07■■■■■ 4.01
PPP1CC-206ENST00000550991 WDR62O43379 1518 aa40.02■■■■■ 4
PPP1CC-206ENST00000550991 CUX1P39880 1505 aa40.02■■■■■ 4
PPP1CC-206ENST00000550991 DNMBPQ6XZF7 1577 aa40.01■■■■■ 4
PPP1CC-206ENST00000550991 TOPBP1Q92547 1522 aa40.01■■■■■ 4
PPP1CC-206ENST00000550991 SYNJ1O43426 1573 aa39.94■■■■□ 3.98
PPP1CC-206ENST00000550991 TOP2BQ02880 1626 aa39.87■■■■□ 3.97
PPP1CC-206ENST00000550991 BIVM-ERCC5R4GMW8 1640 aa39.84■■■■□ 3.97
PPP1CC-206ENST00000550991 CHIC1Q5VXU3 224 aa39.78■■■■□ 3.96
PPP1CC-206ENST00000550991 FGD5Q6ZNL6 1462 aa39.76■■■■□ 3.96
PPP1CC-206ENST00000550991 TRIM41Q8WV44 630 aa39.75■■■■□ 3.95
PPP1CC-206ENST00000550991 CUX2O14529 1486 aa39.73■■■■□ 3.95
PPP1CC-206ENST00000550991 POLA1P09884 1462 aaPredicted RBP39.73■■■■□ 3.95
PPP1CC-206ENST00000550991 SOGA1O94964 1423 aa39.6■■■■□ 3.93
PPP1CC-206ENST00000550991 RAD54L2Q9Y4B4 1467 aa39.59■■■■□ 3.93
PPP1CC-206ENST00000550991 IFT140Q96RY7 1462 aa39.54■■■■□ 3.92
PPP1CC-206ENST00000550991 TARBP1Q13395 1621 aaKnown RBP39.5■■■■□ 3.91
PPP1CC-206ENST00000550991 ABCA10Q8WWZ4 1543 aa39.39■■■■□ 3.9
PPP1CC-206ENST00000550991 WDR97A6NE52 1622 aa39.35■■■■□ 3.89
PPP1CC-206ENST00000550991 ZNF608Q9ULD9 1512 aaPredicted RBP39.35■■■■□ 3.89
PPP1CC-206ENST00000550991 TDRD9Q8NDG6 1382 aaKnown RBP39.31■■■■□ 3.88
PPP1CC-206ENST00000550991 AQRO60306 1485 aaKnown RBP eCLIP39.24■■■■□ 3.874e-8■■■■■ 43
PPP1CC-206ENST00000550991 EIF4G3O43432 1585 aaKnown RBP39.2■■■■□ 3.87
PPP1CC-206ENST00000550991 KIF27Q86VH2 1401 aa39.16■■■■□ 3.86
PPP1CC-206ENST00000550991 ABCA5Q8WWZ7 1642 aa39.16■■■■□ 3.86
PPP1CC-206ENST00000550991 GAPVD1Q14C86 1478 aa39.15■■■■□ 3.86
PPP1CC-206ENST00000550991 RUSC2Q8N2Y8 1516 aa39.11■■■■□ 3.85
PPP1CC-206ENST00000550991 GRIN2BQ13224 1484 aa39.01■■■■□ 3.84
PPP1CC-206ENST00000550991 PBRM1Q86U86 1689 aa39■■■■□ 3.83
PPP1CC-206ENST00000550991 FAM9AQ8IZU1 332 aaPredicted RBP38.98■■■■□ 3.83
PPP1CC-206ENST00000550991 ERICH3Q5RHP9 1530 aa38.92■■■■□ 3.82
PPP1CC-206ENST00000550991 IGF1RP08069 1367 aa38.92■■■■□ 3.82
PPP1CC-206ENST00000550991 EEA1Q15075 1411 aa38.91■■■■□ 3.82
PPP1CC-206ENST00000550991 SNAPC4Q5SXM2 1469 aa38.88■■■■□ 3.81
PPP1CC-206ENST00000550991 CSRNP3Q8WYN3 585 aa38.81■■■■□ 3.8
PPP1CC-206ENST00000550991 MAGI1Q96QZ7 1491 aaPredicted RBP38.81■■■■□ 3.8
PPP1CC-206ENST00000550991 CUL7Q14999 1698 aa38.73■■■■□ 3.79
PPP1CC-206ENST00000550991 ADAMTS12P58397 1594 aa38.73■■■■□ 3.79
PPP1CC-206ENST00000550991 CARMIL1Q5VZK9 1371 aa38.71■■■■□ 3.79
PPP1CC-206ENST00000550991 FHAD1B1AJZ9 1412 aa38.7■■■■□ 3.79
PPP1CC-206ENST00000550991 FBLN2P98095 1184 aa38.67■■■■□ 3.78
PPP1CC-206ENST00000550991 SYNJ2O15056 1496 aa38.66■■■■□ 3.78
PPP1CC-206ENST00000550991 CHMP7Q8WUX9 453 aaPredicted RBP38.64■■■■□ 3.78
PPP1CC-206ENST00000550991 PRXQ9BXM0 1461 aa38.6■■■■□ 3.77
PPP1CC-206ENST00000550991 CHD1O14646 1710 aa38.56■■■■□ 3.76
PPP1CC-206ENST00000550991 RAPGEF2Q9Y4G8 1499 aa38.55■■■■□ 3.76
PPP1CC-206ENST00000550991 GRIN2AQ12879 1464 aa38.52■■■■□ 3.76
PPP1CC-206ENST00000550991 EHMT2Q96KQ7 1210 aa38.47■■■■□ 3.75
PPP1CC-206ENST00000550991 KIF21BO75037 1637 aa38.46■■■■□ 3.75
PPP1CC-206ENST00000550991 GOLGA3Q08378 1498 aa38.33■■■■□ 3.73
PPP1CC-206ENST00000550991 OSCARQ8IYS5 282 aa38.32■■■■□ 3.72
PPP1CC-206ENST00000550991 CEP170Q5SW79 1584 aa38.3■■■■□ 3.72
PPP1CC-206ENST00000550991 NUP160Q12769 1436 aa38.29■■■■□ 3.72
PPP1CC-206ENST00000550991 UBTFP17480 764 aaKnown RBP38.24■■■■□ 3.71
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms