Protein–RNA interactions for Protein: Q9P1A2

PPP4R1L, Putative serine/threonine-protein phosphatase 4 regulatory subunit 1-like, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1LQ9P1A2 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PPP4R1LQ9P1A2 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PPP4R1LQ9P1A2 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC23.29■■□□□ 1.32
PPP4R1LQ9P1A2 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC23.29■■□□□ 1.32
PPP4R1LQ9P1A2 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
PPP4R1LQ9P1A2 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC23.28■■□□□ 1.32
PPP4R1LQ9P1A2 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC23.28■■□□□ 1.32
PPP4R1LQ9P1A2 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC23.28■■□□□ 1.32
PPP4R1LQ9P1A2 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC23.28■■□□□ 1.32
PPP4R1LQ9P1A2 CR559946.2-201ENST00000623684 991 ntBASIC23.28■■□□□ 1.32
PPP4R1LQ9P1A2 GDI1-215ENST00000630693 786 ntTSL 4 BASIC23.28■■□□□ 1.32
PPP4R1LQ9P1A2 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PPP4R1LQ9P1A2 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PPP4R1LQ9P1A2 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PPP4R1LQ9P1A2 CHST11-202ENST00000546689 756 ntTSL 2 BASIC23.27■■□□□ 1.32
PPP4R1LQ9P1A2 MIR3648-2-201ENST00000581792 180 ntBASIC23.27■■□□□ 1.32
PPP4R1LQ9P1A2 MIR3648-1-201ENST00000615959 180 ntBASIC23.27■■□□□ 1.32
PPP4R1LQ9P1A2 AC110285.7-201ENST00000624417 1536 ntBASIC23.27■■□□□ 1.32
PPP4R1LQ9P1A2 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PPP4R1LQ9P1A2 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PPP4R1LQ9P1A2 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PPP4R1LQ9P1A2 HES6-205ENST00000409356 528 ntTSL 2 BASIC23.25■■□□□ 1.31
PPP4R1LQ9P1A2 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
PPP4R1LQ9P1A2 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
PPP4R1LQ9P1A2 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PPP4R1LQ9P1A2 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC23.24■■□□□ 1.31
PPP4R1LQ9P1A2 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PPP4R1LQ9P1A2 AC016575.1-201ENST00000607026 382 ntBASIC23.23■■□□□ 1.31
PPP4R1LQ9P1A2 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
PPP4R1LQ9P1A2 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PPP4R1LQ9P1A2 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC23.22■■□□□ 1.31
PPP4R1LQ9P1A2 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
PPP4R1LQ9P1A2 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC23.22■■□□□ 1.31
PPP4R1LQ9P1A2 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC23.21■■□□□ 1.31
PPP4R1LQ9P1A2 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
PPP4R1LQ9P1A2 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PPP4R1LQ9P1A2 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PPP4R1LQ9P1A2 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
PPP4R1LQ9P1A2 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC23.2■■□□□ 1.3
PPP4R1LQ9P1A2 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PPP4R1LQ9P1A2 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC23.2■■□□□ 1.3
PPP4R1LQ9P1A2 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PPP4R1LQ9P1A2 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
PPP4R1LQ9P1A2 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PPP4R1LQ9P1A2 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PPP4R1LQ9P1A2 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
PPP4R1LQ9P1A2 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
PPP4R1LQ9P1A2 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PPP4R1LQ9P1A2 HLA-V-202ENST00000446817 847 ntBASIC23.18■■□□□ 1.3
PPP4R1LQ9P1A2 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PPP4R1LQ9P1A2 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
PPP4R1LQ9P1A2 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
PPP4R1LQ9P1A2 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PPP4R1LQ9P1A2 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PPP4R1LQ9P1A2 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
PPP4R1LQ9P1A2 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PPP4R1LQ9P1A2 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
PPP4R1LQ9P1A2 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PPP4R1LQ9P1A2 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC23.15■■□□□ 1.3
PPP4R1LQ9P1A2 DRD5P2-201ENST00000421395 2012 ntBASIC23.15■■□□□ 1.3
PPP4R1LQ9P1A2 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PPP4R1LQ9P1A2 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PPP4R1LQ9P1A2 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC23.15■■□□□ 1.3
PPP4R1LQ9P1A2 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PPP4R1LQ9P1A2 AP002414.2-202ENST00000590929 1450 ntBASIC23.15■■□□□ 1.3
PPP4R1LQ9P1A2 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PPP4R1LQ9P1A2 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PPP4R1LQ9P1A2 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
PPP4R1LQ9P1A2 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
PPP4R1LQ9P1A2 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
PPP4R1LQ9P1A2 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
PPP4R1LQ9P1A2 MBP-237ENST00000579129 1052 ntTSL 5 BASIC23.14■■□□□ 1.29
PPP4R1LQ9P1A2 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC23.14■■□□□ 1.29
PPP4R1LQ9P1A2 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
PPP4R1LQ9P1A2 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PPP4R1LQ9P1A2 PEX7-203ENST00000541292 945 ntTSL 5 BASIC23.13■■□□□ 1.29
PPP4R1LQ9P1A2 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC23.13■■□□□ 1.29
PPP4R1LQ9P1A2 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
PPP4R1LQ9P1A2 RPS2-202ENST00000526522 924 ntTSL 2 BASIC23.12■■□□□ 1.29
PPP4R1LQ9P1A2 SHF-206ENST00000560471 2499 ntTSL 5 BASIC23.12■■□□□ 1.29
PPP4R1LQ9P1A2 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PPP4R1LQ9P1A2 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
PPP4R1LQ9P1A2 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PPP4R1LQ9P1A2 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PPP4R1LQ9P1A2 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PPP4R1LQ9P1A2 MIR639-201ENST00000384974 98 ntBASIC23.11■■□□□ 1.29
PPP4R1LQ9P1A2 AC008813.1-201ENST00000536597 885 ntBASIC23.11■■□□□ 1.29
PPP4R1LQ9P1A2 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
PPP4R1LQ9P1A2 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PPP4R1LQ9P1A2 PROC-203ENST00000409048 1586 ntTSL 5 BASIC23.1■■□□□ 1.29
PPP4R1LQ9P1A2 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PPP4R1LQ9P1A2 METRNL-202ENST00000570778 967 ntTSL 5 BASIC23.1■■□□□ 1.29
PPP4R1LQ9P1A2 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PPP4R1LQ9P1A2 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PPP4R1LQ9P1A2 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PPP4R1LQ9P1A2 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
PPP4R1LQ9P1A2 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
PPP4R1LQ9P1A2 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
PPP4R1LQ9P1A2 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
PPP4R1LQ9P1A2 RPS2-210ENST00000530225 765 ntTSL 2 BASIC23.09■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms