Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 SRP68-213ENST00000629930 165 ntTSL 5 BASIC28.56■■■□□ 2.16
CCDC60Q8IWA6 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC28.55■■■□□ 2.16
CCDC60Q8IWA6 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
CCDC60Q8IWA6 AC008813.1-201ENST00000536597 885 ntBASIC28.55■■■□□ 2.16
CCDC60Q8IWA6 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC28.55■■■□□ 2.16
CCDC60Q8IWA6 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
CCDC60Q8IWA6 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
CCDC60Q8IWA6 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
CCDC60Q8IWA6 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC28.54■■■□□ 2.16
CCDC60Q8IWA6 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
CCDC60Q8IWA6 ABHD17AP3-201ENST00000503096 1137 ntBASIC28.54■■■□□ 2.16
CCDC60Q8IWA6 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC28.54■■■□□ 2.16
CCDC60Q8IWA6 HSD17B1P1-201ENST00000590052 955 ntBASIC28.54■■■□□ 2.16
CCDC60Q8IWA6 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
CCDC60Q8IWA6 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
CCDC60Q8IWA6 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC28.53■■■□□ 2.16
CCDC60Q8IWA6 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
CCDC60Q8IWA6 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC28.52■■■□□ 2.16
CCDC60Q8IWA6 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC28.52■■■□□ 2.16
CCDC60Q8IWA6 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC28.51■■■□□ 2.15
CCDC60Q8IWA6 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
CCDC60Q8IWA6 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
CCDC60Q8IWA6 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
CCDC60Q8IWA6 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
CCDC60Q8IWA6 RPS2-210ENST00000530225 765 ntTSL 2 BASIC28.49■■■□□ 2.15
CCDC60Q8IWA6 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC28.49■■■□□ 2.15
CCDC60Q8IWA6 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
CCDC60Q8IWA6 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
CCDC60Q8IWA6 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC28.48■■■□□ 2.15
CCDC60Q8IWA6 ABCB10P3-201ENST00000561950 2166 ntBASIC28.48■■■□□ 2.15
CCDC60Q8IWA6 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
CCDC60Q8IWA6 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC28.47■■■□□ 2.15
CCDC60Q8IWA6 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC28.47■■■□□ 2.15
CCDC60Q8IWA6 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC28.46■■■□□ 2.15
CCDC60Q8IWA6 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC28.46■■■□□ 2.15
CCDC60Q8IWA6 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC28.45■■■□□ 2.15
CCDC60Q8IWA6 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC28.45■■■□□ 2.15
CCDC60Q8IWA6 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC28.45■■■□□ 2.14
CCDC60Q8IWA6 CHST11-203ENST00000547956 936 ntTSL 2 BASIC28.45■■■□□ 2.14
CCDC60Q8IWA6 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC28.44■■■□□ 2.14
CCDC60Q8IWA6 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC28.44■■■□□ 2.14
CCDC60Q8IWA6 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
CCDC60Q8IWA6 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC28.44■■■□□ 2.14
CCDC60Q8IWA6 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
CCDC60Q8IWA6 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
CCDC60Q8IWA6 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC28.43■■■□□ 2.14
CCDC60Q8IWA6 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
CCDC60Q8IWA6 TPT1-202ENST00000379055 948 ntTSL 2 BASIC28.43■■■□□ 2.14
CCDC60Q8IWA6 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC28.43■■■□□ 2.14
CCDC60Q8IWA6 AC148477.6-201ENST00000623746 465 ntBASIC28.43■■■□□ 2.14
CCDC60Q8IWA6 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC28.43■■■□□ 2.14
CCDC60Q8IWA6 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
CCDC60Q8IWA6 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC28.42■■■□□ 2.14
CCDC60Q8IWA6 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC28.42■■■□□ 2.14
CCDC60Q8IWA6 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
CCDC60Q8IWA6 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
CCDC60Q8IWA6 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
CCDC60Q8IWA6 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC28.4■■■□□ 2.14
CCDC60Q8IWA6 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC28.4■■■□□ 2.14
CCDC60Q8IWA6 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC28.39■■■□□ 2.14
CCDC60Q8IWA6 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
CCDC60Q8IWA6 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
CCDC60Q8IWA6 BRD4-212ENST00000630599 726 ntTSL 2 BASIC28.39■■■□□ 2.14
CCDC60Q8IWA6 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC28.39■■■□□ 2.13
CCDC60Q8IWA6 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC28.39■■■□□ 2.13
CCDC60Q8IWA6 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC28.38■■■□□ 2.13
CCDC60Q8IWA6 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
CCDC60Q8IWA6 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC28.38■■■□□ 2.13
CCDC60Q8IWA6 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
CCDC60Q8IWA6 MIR219A2-201ENST00000608502 1504 ntBASIC28.38■■■□□ 2.13
CCDC60Q8IWA6 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC28.37■■■□□ 2.13
CCDC60Q8IWA6 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC28.36■■■□□ 2.13
CCDC60Q8IWA6 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC28.36■■■□□ 2.13
CCDC60Q8IWA6 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC28.36■■■□□ 2.13
CCDC60Q8IWA6 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC28.36■■■□□ 2.13
CCDC60Q8IWA6 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
CCDC60Q8IWA6 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
CCDC60Q8IWA6 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
CCDC60Q8IWA6 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC28.35■■■□□ 2.13
CCDC60Q8IWA6 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
CCDC60Q8IWA6 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
CCDC60Q8IWA6 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC28.35■■■□□ 2.13
CCDC60Q8IWA6 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC28.35■■■□□ 2.13
CCDC60Q8IWA6 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
CCDC60Q8IWA6 GPX1-201ENST00000419349 1106 ntBASIC28.34■■■□□ 2.13
CCDC60Q8IWA6 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC28.34■■■□□ 2.13
CCDC60Q8IWA6 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC28.34■■■□□ 2.13
CCDC60Q8IWA6 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
CCDC60Q8IWA6 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC28.32■■■□□ 2.12
CCDC60Q8IWA6 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
CCDC60Q8IWA6 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC28.31■■■□□ 2.12
CCDC60Q8IWA6 CEP120-209ENST00000515110 606 ntTSL 3 BASIC28.31■■■□□ 2.12
CCDC60Q8IWA6 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC28.31■■■□□ 2.12
CCDC60Q8IWA6 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC28.3■■■□□ 2.12
CCDC60Q8IWA6 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC28.3■■■□□ 2.12
CCDC60Q8IWA6 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
CCDC60Q8IWA6 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC28.3■■■□□ 2.12
CCDC60Q8IWA6 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
CCDC60Q8IWA6 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC28.29■■■□□ 2.12
CCDC60Q8IWA6 AC139426.1-201ENST00000568218 2529 ntBASIC28.29■■■□□ 2.12
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms