Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RAI1Q7Z5J4 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
RAI1Q7Z5J4 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC21.96■■□□□ 1.11
RAI1Q7Z5J4 HES4-202ENST00000428771 1040 ntTSL 2 BASIC21.96■■□□□ 1.11
RAI1Q7Z5J4 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RAI1Q7Z5J4 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
RAI1Q7Z5J4 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RAI1Q7Z5J4 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC21.95■■□□□ 1.1
RAI1Q7Z5J4 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC21.95■■□□□ 1.1
RAI1Q7Z5J4 CHST11-203ENST00000547956 936 ntTSL 2 BASIC21.95■■□□□ 1.1
RAI1Q7Z5J4 AC022413.1-201ENST00000624602 984 ntBASIC21.95■■□□□ 1.1
RAI1Q7Z5J4 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
RAI1Q7Z5J4 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC21.95■■□□□ 1.1
RAI1Q7Z5J4 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
RAI1Q7Z5J4 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RAI1Q7Z5J4 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
RAI1Q7Z5J4 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC21.93■■□□□ 1.1
RAI1Q7Z5J4 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RAI1Q7Z5J4 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC21.93■■□□□ 1.1
RAI1Q7Z5J4 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC21.93■■□□□ 1.1
RAI1Q7Z5J4 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RAI1Q7Z5J4 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RAI1Q7Z5J4 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RAI1Q7Z5J4 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RAI1Q7Z5J4 RPS2-210ENST00000530225 765 ntTSL 2 BASIC21.92■■□□□ 1.1
RAI1Q7Z5J4 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC21.92■■□□□ 1.1
RAI1Q7Z5J4 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
RAI1Q7Z5J4 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RAI1Q7Z5J4 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RAI1Q7Z5J4 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC21.91■■□□□ 1.1
RAI1Q7Z5J4 AC012354.3-201ENST00000623734 483 ntBASIC21.91■■□□□ 1.1
RAI1Q7Z5J4 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RAI1Q7Z5J4 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RAI1Q7Z5J4 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RAI1Q7Z5J4 AC092296.2-201ENST00000589470 999 ntBASIC21.89■■□□□ 1.09
RAI1Q7Z5J4 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
RAI1Q7Z5J4 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
RAI1Q7Z5J4 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
RAI1Q7Z5J4 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RAI1Q7Z5J4 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RAI1Q7Z5J4 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RAI1Q7Z5J4 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC21.87■■□□□ 1.09
RAI1Q7Z5J4 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
RAI1Q7Z5J4 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RAI1Q7Z5J4 AC110285.7-201ENST00000624417 1536 ntBASIC21.86■■□□□ 1.09
RAI1Q7Z5J4 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
RAI1Q7Z5J4 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RAI1Q7Z5J4 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
RAI1Q7Z5J4 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC21.85■■□□□ 1.09
RAI1Q7Z5J4 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RAI1Q7Z5J4 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
RAI1Q7Z5J4 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RAI1Q7Z5J4 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC21.84■■□□□ 1.09
RAI1Q7Z5J4 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RAI1Q7Z5J4 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RAI1Q7Z5J4 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC21.84■■□□□ 1.09
RAI1Q7Z5J4 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
RAI1Q7Z5J4 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RAI1Q7Z5J4 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
RAI1Q7Z5J4 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
RAI1Q7Z5J4 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RAI1Q7Z5J4 MIR219A2-201ENST00000608502 1504 ntBASIC21.83■■□□□ 1.09
RAI1Q7Z5J4 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RAI1Q7Z5J4 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC21.82■■□□□ 1.08
RAI1Q7Z5J4 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC21.82■■□□□ 1.08
RAI1Q7Z5J4 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC21.82■■□□□ 1.08
RAI1Q7Z5J4 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RAI1Q7Z5J4 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
RAI1Q7Z5J4 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
RAI1Q7Z5J4 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
RAI1Q7Z5J4 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RAI1Q7Z5J4 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
RAI1Q7Z5J4 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
RAI1Q7Z5J4 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
RAI1Q7Z5J4 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC21.81■■□□□ 1.08
RAI1Q7Z5J4 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RAI1Q7Z5J4 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
RAI1Q7Z5J4 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RAI1Q7Z5J4 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC21.8■■□□□ 1.08
RAI1Q7Z5J4 HYI-213ENST00000583037 1322 ntTSL 5 BASIC21.8■■□□□ 1.08
RAI1Q7Z5J4 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RAI1Q7Z5J4 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
RAI1Q7Z5J4 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RAI1Q7Z5J4 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC21.8■■□□□ 1.08
RAI1Q7Z5J4 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC21.8■■□□□ 1.08
RAI1Q7Z5J4 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RAI1Q7Z5J4 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
RAI1Q7Z5J4 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC21.79■■□□□ 1.08
RAI1Q7Z5J4 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RAI1Q7Z5J4 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RAI1Q7Z5J4 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RAI1Q7Z5J4 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC21.78■■□□□ 1.08
RAI1Q7Z5J4 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC21.78■■□□□ 1.08
RAI1Q7Z5J4 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RAI1Q7Z5J4 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RAI1Q7Z5J4 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC21.77■■□□□ 1.08
RAI1Q7Z5J4 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
RAI1Q7Z5J4 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
RAI1Q7Z5J4 KRT18P60-201ENST00000312876 1297 ntBASIC21.76■■□□□ 1.07
RAI1Q7Z5J4 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms