Protein–RNA interactions for Protein: Q5TH69

ARFGEF3, Brefeldin A-inhibited guanine nucleotide-exchange protein 3, humanhuman

Predictions only

Length 2,177 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF3Q5TH69 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC21.71■■□□□ 1.07
ARFGEF3Q5TH69 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC21.71■■□□□ 1.07
ARFGEF3Q5TH69 MEST-211ENST00000437945 1455 ntTSL 5 BASIC21.71■■□□□ 1.07
ARFGEF3Q5TH69 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
ARFGEF3Q5TH69 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC21.7■■□□□ 1.07
ARFGEF3Q5TH69 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
ARFGEF3Q5TH69 AC008813.1-201ENST00000536597 885 ntBASIC21.7■■□□□ 1.06
ARFGEF3Q5TH69 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC21.7■■□□□ 1.06
ARFGEF3Q5TH69 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ARFGEF3Q5TH69 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC21.7■■□□□ 1.06
ARFGEF3Q5TH69 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
ARFGEF3Q5TH69 RARRES2P2-201ENST00000394842 485 ntBASIC21.69■■□□□ 1.06
ARFGEF3Q5TH69 GPX1-201ENST00000419349 1106 ntBASIC21.69■■□□□ 1.06
ARFGEF3Q5TH69 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
ARFGEF3Q5TH69 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
ARFGEF3Q5TH69 AC110285.7-201ENST00000624417 1536 ntBASIC21.69■■□□□ 1.06
ARFGEF3Q5TH69 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
ARFGEF3Q5TH69 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ARFGEF3Q5TH69 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
ARFGEF3Q5TH69 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC21.68■■□□□ 1.06
ARFGEF3Q5TH69 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ARFGEF3Q5TH69 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
ARFGEF3Q5TH69 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC21.67■■□□□ 1.06
ARFGEF3Q5TH69 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC21.67■■□□□ 1.06
ARFGEF3Q5TH69 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ARFGEF3Q5TH69 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
ARFGEF3Q5TH69 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC21.67■■□□□ 1.06
ARFGEF3Q5TH69 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ARFGEF3Q5TH69 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
ARFGEF3Q5TH69 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
ARFGEF3Q5TH69 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC21.65■■□□□ 1.06
ARFGEF3Q5TH69 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ARFGEF3Q5TH69 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
ARFGEF3Q5TH69 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
ARFGEF3Q5TH69 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ARFGEF3Q5TH69 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
ARFGEF3Q5TH69 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
ARFGEF3Q5TH69 AC100797.4-201ENST00000631653 1827 ntBASIC21.64■■□□□ 1.06
ARFGEF3Q5TH69 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC21.64■■□□□ 1.06
ARFGEF3Q5TH69 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
ARFGEF3Q5TH69 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
ARFGEF3Q5TH69 CEP120-209ENST00000515110 606 ntTSL 3 BASIC21.63■■□□□ 1.05
ARFGEF3Q5TH69 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC21.63■■□□□ 1.05
ARFGEF3Q5TH69 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC21.63■■□□□ 1.05
ARFGEF3Q5TH69 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ARFGEF3Q5TH69 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
ARFGEF3Q5TH69 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
ARFGEF3Q5TH69 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ARFGEF3Q5TH69 CHST11-203ENST00000547956 936 ntTSL 2 BASIC21.63■■□□□ 1.05
ARFGEF3Q5TH69 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
ARFGEF3Q5TH69 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
ARFGEF3Q5TH69 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ARFGEF3Q5TH69 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ARFGEF3Q5TH69 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ARFGEF3Q5TH69 AC060814.1-201ENST00000554326 538 ntBASIC21.61■■□□□ 1.05
ARFGEF3Q5TH69 AP004833.2-201ENST00000532228 1454 ntBASIC21.61■■□□□ 1.05
ARFGEF3Q5TH69 MIR219A2-201ENST00000608502 1504 ntBASIC21.61■■□□□ 1.05
ARFGEF3Q5TH69 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ARFGEF3Q5TH69 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
ARFGEF3Q5TH69 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
ARFGEF3Q5TH69 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC21.6■■□□□ 1.05
ARFGEF3Q5TH69 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ARFGEF3Q5TH69 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ARFGEF3Q5TH69 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC21.59■■□□□ 1.05
ARFGEF3Q5TH69 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ARFGEF3Q5TH69 AL139393.2-201ENST00000608721 2025 ntBASIC21.59■■□□□ 1.05
ARFGEF3Q5TH69 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ARFGEF3Q5TH69 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC21.58■■□□□ 1.05
ARFGEF3Q5TH69 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
ARFGEF3Q5TH69 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC21.58■■□□□ 1.05
ARFGEF3Q5TH69 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
ARFGEF3Q5TH69 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
ARFGEF3Q5TH69 ABCB10P3-201ENST00000561950 2166 ntBASIC21.57■■□□□ 1.04
ARFGEF3Q5TH69 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC21.57■■□□□ 1.04
ARFGEF3Q5TH69 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC21.57■■□□□ 1.04
ARFGEF3Q5TH69 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC21.57■■□□□ 1.04
ARFGEF3Q5TH69 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC21.57■■□□□ 1.04
ARFGEF3Q5TH69 ABHD17AP5-201ENST00000580133 923 ntBASIC21.57■■□□□ 1.04
ARFGEF3Q5TH69 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
ARFGEF3Q5TH69 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC21.56■■□□□ 1.04
ARFGEF3Q5TH69 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
ARFGEF3Q5TH69 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC21.56■■□□□ 1.04
ARFGEF3Q5TH69 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
ARFGEF3Q5TH69 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ARFGEF3Q5TH69 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ARFGEF3Q5TH69 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC21.55■■□□□ 1.04
ARFGEF3Q5TH69 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ARFGEF3Q5TH69 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
ARFGEF3Q5TH69 HES4-202ENST00000428771 1040 ntTSL 2 BASIC21.54■■□□□ 1.04
ARFGEF3Q5TH69 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ARFGEF3Q5TH69 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ARFGEF3Q5TH69 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
ARFGEF3Q5TH69 AC022413.1-201ENST00000624602 984 ntBASIC21.54■■□□□ 1.04
ARFGEF3Q5TH69 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ARFGEF3Q5TH69 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ARFGEF3Q5TH69 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
ARFGEF3Q5TH69 RNF126P1-201ENST00000567452 1320 ntBASIC21.53■■□□□ 1.04
ARFGEF3Q5TH69 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ARFGEF3Q5TH69 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
ARFGEF3Q5TH69 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms