Protein–RNA interactions for Protein: Q53EP0

FNDC3B, Fibronectin type III domain-containing protein 3B, humanhuman

Known RBP Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3BQ53EP0 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
FNDC3BQ53EP0 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
FNDC3BQ53EP0 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
FNDC3BQ53EP0 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC25.89■■□□□ 1.74
FNDC3BQ53EP0 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
FNDC3BQ53EP0 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC25.89■■□□□ 1.74
FNDC3BQ53EP0 AP004833.2-201ENST00000532228 1454 ntBASIC25.89■■□□□ 1.73
FNDC3BQ53EP0 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC25.88■■□□□ 1.73
FNDC3BQ53EP0 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC25.88■■□□□ 1.73
FNDC3BQ53EP0 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC25.88■■□□□ 1.73
FNDC3BQ53EP0 RPS2-210ENST00000530225 765 ntTSL 2 BASIC25.88■■□□□ 1.73
FNDC3BQ53EP0 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC25.87■■□□□ 1.73
FNDC3BQ53EP0 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
FNDC3BQ53EP0 PEX7-203ENST00000541292 945 ntTSL 5 BASIC25.87■■□□□ 1.73
FNDC3BQ53EP0 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
FNDC3BQ53EP0 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
FNDC3BQ53EP0 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC25.86■■□□□ 1.73
FNDC3BQ53EP0 AC022413.1-201ENST00000624602 984 ntBASIC25.86■■□□□ 1.73
FNDC3BQ53EP0 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC25.86■■□□□ 1.73
FNDC3BQ53EP0 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC25.86■■□□□ 1.73
FNDC3BQ53EP0 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC25.85■■□□□ 1.73
FNDC3BQ53EP0 RARRES2P2-201ENST00000394842 485 ntBASIC25.85■■□□□ 1.73
FNDC3BQ53EP0 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
FNDC3BQ53EP0 AC148477.6-201ENST00000623746 465 ntBASIC25.85■■□□□ 1.73
FNDC3BQ53EP0 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC25.84■■□□□ 1.73
FNDC3BQ53EP0 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
FNDC3BQ53EP0 ST7-205ENST00000393446 2114 ntTSL 5 BASIC25.84■■□□□ 1.73
FNDC3BQ53EP0 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
FNDC3BQ53EP0 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
FNDC3BQ53EP0 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC25.83■■□□□ 1.72
FNDC3BQ53EP0 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
FNDC3BQ53EP0 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
FNDC3BQ53EP0 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC25.82■■□□□ 1.72
FNDC3BQ53EP0 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC25.82■■□□□ 1.72
FNDC3BQ53EP0 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC25.82■■□□□ 1.72
FNDC3BQ53EP0 RNF126P1-201ENST00000567452 1320 ntBASIC25.82■■□□□ 1.72
FNDC3BQ53EP0 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
FNDC3BQ53EP0 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
FNDC3BQ53EP0 MIR219A2-201ENST00000608502 1504 ntBASIC25.81■■□□□ 1.72
FNDC3BQ53EP0 AC100797.4-201ENST00000631653 1827 ntBASIC25.81■■□□□ 1.72
FNDC3BQ53EP0 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC25.8■■□□□ 1.72
FNDC3BQ53EP0 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC25.8■■□□□ 1.72
FNDC3BQ53EP0 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC25.8■■□□□ 1.72
FNDC3BQ53EP0 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
FNDC3BQ53EP0 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC25.8■■□□□ 1.72
FNDC3BQ53EP0 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
FNDC3BQ53EP0 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC25.79■■□□□ 1.72
FNDC3BQ53EP0 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
FNDC3BQ53EP0 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC25.78■■□□□ 1.72
FNDC3BQ53EP0 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC25.78■■□□□ 1.72
FNDC3BQ53EP0 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
FNDC3BQ53EP0 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC25.77■■□□□ 1.72
FNDC3BQ53EP0 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.76■■□□□ 1.71
FNDC3BQ53EP0 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC25.76■■□□□ 1.71
FNDC3BQ53EP0 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC25.76■■□□□ 1.71
FNDC3BQ53EP0 AL139393.2-201ENST00000608721 2025 ntBASIC25.75■■□□□ 1.71
FNDC3BQ53EP0 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
FNDC3BQ53EP0 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
FNDC3BQ53EP0 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC25.74■■□□□ 1.71
FNDC3BQ53EP0 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
FNDC3BQ53EP0 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC25.73■■□□□ 1.71
FNDC3BQ53EP0 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
FNDC3BQ53EP0 HES4-202ENST00000428771 1040 ntTSL 2 BASIC25.73■■□□□ 1.71
FNDC3BQ53EP0 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC25.73■■□□□ 1.71
FNDC3BQ53EP0 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC25.73■■□□□ 1.71
FNDC3BQ53EP0 ST7-202ENST00000323984 2142 ntTSL 5 BASIC25.73■■□□□ 1.71
FNDC3BQ53EP0 ST7-207ENST00000393449 2127 ntTSL 5 BASIC25.73■■□□□ 1.71
FNDC3BQ53EP0 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
FNDC3BQ53EP0 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC25.73■■□□□ 1.71
FNDC3BQ53EP0 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC25.72■■□□□ 1.71
FNDC3BQ53EP0 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC25.72■■□□□ 1.71
FNDC3BQ53EP0 ABHD17AP5-201ENST00000580133 923 ntBASIC25.72■■□□□ 1.71
FNDC3BQ53EP0 ABCB10P1-201ENST00000614297 2181 ntBASIC25.72■■□□□ 1.71
FNDC3BQ53EP0 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
FNDC3BQ53EP0 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
FNDC3BQ53EP0 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
FNDC3BQ53EP0 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC25.71■■□□□ 1.71
FNDC3BQ53EP0 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC25.71■■□□□ 1.71
FNDC3BQ53EP0 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC25.7■■□□□ 1.71
FNDC3BQ53EP0 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
FNDC3BQ53EP0 AC060814.1-201ENST00000554326 538 ntBASIC25.7■■□□□ 1.7
FNDC3BQ53EP0 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
FNDC3BQ53EP0 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
FNDC3BQ53EP0 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC25.69■■□□□ 1.7
FNDC3BQ53EP0 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC25.69■■□□□ 1.7
FNDC3BQ53EP0 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
FNDC3BQ53EP0 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
FNDC3BQ53EP0 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
FNDC3BQ53EP0 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC25.68■■□□□ 1.7
FNDC3BQ53EP0 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC25.67■■□□□ 1.7
FNDC3BQ53EP0 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
FNDC3BQ53EP0 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
FNDC3BQ53EP0 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
FNDC3BQ53EP0 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC25.67■■□□□ 1.7
FNDC3BQ53EP0 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
FNDC3BQ53EP0 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
FNDC3BQ53EP0 ABCB10P3-201ENST00000561950 2166 ntBASIC25.66■■□□□ 1.7
FNDC3BQ53EP0 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
FNDC3BQ53EP0 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC25.65■■□□□ 1.7
FNDC3BQ53EP0 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC25.65■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 122.8 ms