Protein–RNA interactions for Protein: P35542

SAA4, Serum amyloid A-4 protein, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAA4P35542 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SAA4P35542 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SAA4P35542 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC20.64■□□□□ 0.89
SAA4P35542 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SAA4P35542 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SAA4P35542 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SAA4P35542 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC20.63■□□□□ 0.89
SAA4P35542 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SAA4P35542 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SAA4P35542 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
SAA4P35542 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SAA4P35542 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
SAA4P35542 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC20.63■□□□□ 0.89
SAA4P35542 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
SAA4P35542 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SAA4P35542 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SAA4P35542 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SAA4P35542 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SAA4P35542 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SAA4P35542 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SAA4P35542 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
SAA4P35542 ABCB10P3-201ENST00000561950 2166 ntBASIC20.62■□□□□ 0.89
SAA4P35542 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SAA4P35542 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC20.62■□□□□ 0.89
SAA4P35542 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SAA4P35542 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
SAA4P35542 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SAA4P35542 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SAA4P35542 PEX7-203ENST00000541292 945 ntTSL 5 BASIC20.6■□□□□ 0.89
SAA4P35542 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC20.6■□□□□ 0.89
SAA4P35542 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SAA4P35542 RPS2-210ENST00000530225 765 ntTSL 2 BASIC20.59■□□□□ 0.89
SAA4P35542 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC20.58■□□□□ 0.89
SAA4P35542 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
SAA4P35542 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC20.58■□□□□ 0.89
SAA4P35542 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SAA4P35542 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SAA4P35542 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SAA4P35542 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SAA4P35542 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
SAA4P35542 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
SAA4P35542 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC20.57■□□□□ 0.88
SAA4P35542 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SAA4P35542 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC20.56■□□□□ 0.88
SAA4P35542 ABHD17AP3-201ENST00000503096 1137 ntBASIC20.56■□□□□ 0.88
SAA4P35542 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
SAA4P35542 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SAA4P35542 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
SAA4P35542 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SAA4P35542 TPT1-202ENST00000379055 948 ntTSL 2 BASIC20.55■□□□□ 0.88
SAA4P35542 CHST11-203ENST00000547956 936 ntTSL 2 BASIC20.55■□□□□ 0.88
SAA4P35542 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC20.55■□□□□ 0.88
SAA4P35542 SRP68-213ENST00000629930 165 ntTSL 5 BASIC20.55■□□□□ 0.88
SAA4P35542 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC20.55■□□□□ 0.88
SAA4P35542 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC20.54■□□□□ 0.88
SAA4P35542 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SAA4P35542 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SAA4P35542 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SAA4P35542 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SAA4P35542 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SAA4P35542 AC148477.6-201ENST00000623746 465 ntBASIC20.53■□□□□ 0.88
SAA4P35542 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC20.53■□□□□ 0.88
SAA4P35542 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SAA4P35542 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SAA4P35542 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC20.52■□□□□ 0.88
SAA4P35542 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SAA4P35542 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SAA4P35542 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
SAA4P35542 HSD17B1P1-201ENST00000590052 955 ntBASIC20.52■□□□□ 0.88
SAA4P35542 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC20.52■□□□□ 0.88
SAA4P35542 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
SAA4P35542 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SAA4P35542 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC20.51■□□□□ 0.87
SAA4P35542 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC20.51■□□□□ 0.87
SAA4P35542 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC20.51■□□□□ 0.87
SAA4P35542 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SAA4P35542 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
SAA4P35542 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SAA4P35542 AC139426.1-201ENST00000568218 2529 ntBASIC20.51■□□□□ 0.87
SAA4P35542 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SAA4P35542 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC20.5■□□□□ 0.87
SAA4P35542 MIR219A2-201ENST00000608502 1504 ntBASIC20.5■□□□□ 0.87
SAA4P35542 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
SAA4P35542 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC20.5■□□□□ 0.87
SAA4P35542 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SAA4P35542 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SAA4P35542 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SAA4P35542 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
SAA4P35542 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
SAA4P35542 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SAA4P35542 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SAA4P35542 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
SAA4P35542 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SAA4P35542 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SAA4P35542 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SAA4P35542 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SAA4P35542 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
SAA4P35542 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SAA4P35542 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SAA4P35542 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms