Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LTAP01374 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LTAP01374 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
LTAP01374 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LTAP01374 AP002414.2-202ENST00000590929 1450 ntBASIC19.11■□□□□ 0.65
LTAP01374 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
LTAP01374 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
LTAP01374 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LTAP01374 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC19.1■□□□□ 0.65
LTAP01374 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LTAP01374 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LTAP01374 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC19.1■□□□□ 0.65
LTAP01374 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
LTAP01374 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC19.1■□□□□ 0.65
LTAP01374 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LTAP01374 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LTAP01374 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
LTAP01374 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LTAP01374 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
LTAP01374 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC19.09■□□□□ 0.65
LTAP01374 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
LTAP01374 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
LTAP01374 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC19.08■□□□□ 0.65
LTAP01374 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
LTAP01374 AC145676.1-201ENST00000514988 2004 ntBASIC19.08■□□□□ 0.64
LTAP01374 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
LTAP01374 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LTAP01374 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LTAP01374 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
LTAP01374 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
LTAP01374 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
LTAP01374 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LTAP01374 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC19.06■□□□□ 0.64
LTAP01374 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC19.06■□□□□ 0.64
LTAP01374 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC19.06■□□□□ 0.64
LTAP01374 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LTAP01374 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC19.06■□□□□ 0.64
LTAP01374 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC19.06■□□□□ 0.64
LTAP01374 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
LTAP01374 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LTAP01374 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LTAP01374 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LTAP01374 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
LTAP01374 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LTAP01374 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LTAP01374 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LTAP01374 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LTAP01374 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LTAP01374 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC19.04■□□□□ 0.64
LTAP01374 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LTAP01374 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
LTAP01374 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LTAP01374 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LTAP01374 AC020928.2-201ENST00000588717 2197 ntBASIC19.03■□□□□ 0.64
LTAP01374 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LTAP01374 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
LTAP01374 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC19.03■□□□□ 0.64
LTAP01374 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LTAP01374 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LTAP01374 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC19.03■□□□□ 0.64
LTAP01374 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
LTAP01374 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LTAP01374 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LTAP01374 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC19.02■□□□□ 0.64
LTAP01374 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.63
LTAP01374 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC19.01■□□□□ 0.63
LTAP01374 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LTAP01374 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LTAP01374 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC19■□□□□ 0.63
LTAP01374 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
LTAP01374 PKM-204ENST00000449901 2526 ntTSL 2 BASIC19■□□□□ 0.63
LTAP01374 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
LTAP01374 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC19■□□□□ 0.63
LTAP01374 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LTAP01374 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LTAP01374 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
LTAP01374 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
LTAP01374 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
LTAP01374 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LTAP01374 AC018358.1-201ENST00000631079 1402 ntBASIC18.99■□□□□ 0.63
LTAP01374 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC18.99■□□□□ 0.63
LTAP01374 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LTAP01374 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LTAP01374 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LTAP01374 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
LTAP01374 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LTAP01374 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LTAP01374 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC18.97■□□□□ 0.63
LTAP01374 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC18.97■□□□□ 0.63
LTAP01374 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
LTAP01374 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC18.96■□□□□ 0.63
LTAP01374 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC18.96■□□□□ 0.63
LTAP01374 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LTAP01374 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LTAP01374 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC18.95■□□□□ 0.62
LTAP01374 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
LTAP01374 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LTAP01374 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
LTAP01374 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LTAP01374 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms