Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RNF223E7ERA6 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RNF223E7ERA6 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC21.28■■□□□ 1
RNF223E7ERA6 AC092296.2-201ENST00000589470 999 ntBASIC21.28■■□□□ 1
RNF223E7ERA6 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RNF223E7ERA6 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RNF223E7ERA6 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
RNF223E7ERA6 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RNF223E7ERA6 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
RNF223E7ERA6 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC21.26■□□□□ 0.99
RNF223E7ERA6 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC21.26■□□□□ 0.99
RNF223E7ERA6 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
RNF223E7ERA6 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RNF223E7ERA6 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RNF223E7ERA6 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RNF223E7ERA6 GUK1-208ENST00000366728 842 ntTSL 2 BASIC21.25■□□□□ 0.99
RNF223E7ERA6 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RNF223E7ERA6 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RNF223E7ERA6 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC21.25■□□□□ 0.99
RNF223E7ERA6 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
RNF223E7ERA6 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF223E7ERA6 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF223E7ERA6 ECEL1P2-201ENST00000461596 1295 ntBASIC21.24■□□□□ 0.99
RNF223E7ERA6 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC21.23■□□□□ 0.99
RNF223E7ERA6 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF223E7ERA6 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
RNF223E7ERA6 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF223E7ERA6 RARRES2P1-201ENST00000474487 481 ntBASIC21.23■□□□□ 0.99
RNF223E7ERA6 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RNF223E7ERA6 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF223E7ERA6 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RNF223E7ERA6 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF223E7ERA6 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RNF223E7ERA6 AL135925.1-201ENST00000605920 1701 ntBASIC21.22■□□□□ 0.99
RNF223E7ERA6 AC126177.7-201ENST00000547904 679 ntBASIC21.22■□□□□ 0.99
RNF223E7ERA6 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC21.22■□□□□ 0.99
RNF223E7ERA6 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
RNF223E7ERA6 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RNF223E7ERA6 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
RNF223E7ERA6 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC21.21■□□□□ 0.99
RNF223E7ERA6 PEX7-203ENST00000541292 945 ntTSL 5 BASIC21.21■□□□□ 0.99
RNF223E7ERA6 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC21.2■□□□□ 0.98
RNF223E7ERA6 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC21.2■□□□□ 0.98
RNF223E7ERA6 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RNF223E7ERA6 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC21.2■□□□□ 0.98
RNF223E7ERA6 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC21.2■□□□□ 0.98
RNF223E7ERA6 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF223E7ERA6 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF223E7ERA6 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF223E7ERA6 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF223E7ERA6 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF223E7ERA6 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RNF223E7ERA6 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC21.18■□□□□ 0.98
RNF223E7ERA6 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC21.18■□□□□ 0.98
RNF223E7ERA6 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC21.18■□□□□ 0.98
RNF223E7ERA6 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF223E7ERA6 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC21.17■□□□□ 0.98
RNF223E7ERA6 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RNF223E7ERA6 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RNF223E7ERA6 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
RNF223E7ERA6 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF223E7ERA6 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF223E7ERA6 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC21.15■□□□□ 0.98
RNF223E7ERA6 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF223E7ERA6 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC21.15■□□□□ 0.98
RNF223E7ERA6 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF223E7ERA6 MOB2-207ENST00000614710 705 ntTSL 5 BASIC21.15■□□□□ 0.98
RNF223E7ERA6 MEST-211ENST00000437945 1455 ntTSL 5 BASIC21.14■□□□□ 0.98
RNF223E7ERA6 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RNF223E7ERA6 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC21.14■□□□□ 0.97
RNF223E7ERA6 MED25-210ENST00000612854 801 ntTSL 5 BASIC21.14■□□□□ 0.97
RNF223E7ERA6 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RNF223E7ERA6 MED25-214ENST00000622402 642 ntTSL 5 BASIC21.14■□□□□ 0.97
RNF223E7ERA6 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RNF223E7ERA6 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RNF223E7ERA6 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
RNF223E7ERA6 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC21.13■□□□□ 0.97
RNF223E7ERA6 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF223E7ERA6 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF223E7ERA6 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC21.13■□□□□ 0.97
RNF223E7ERA6 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF223E7ERA6 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RNF223E7ERA6 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
RNF223E7ERA6 DUX4L18-201ENST00000553347 1267 ntBASIC21.12■□□□□ 0.97
RNF223E7ERA6 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC21.12■□□□□ 0.97
RNF223E7ERA6 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF223E7ERA6 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF223E7ERA6 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF223E7ERA6 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC21.11■□□□□ 0.97
RNF223E7ERA6 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF223E7ERA6 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC21.11■□□□□ 0.97
RNF223E7ERA6 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC21.11■□□□□ 0.97
RNF223E7ERA6 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
RNF223E7ERA6 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RNF223E7ERA6 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF223E7ERA6 AL157400.5-201ENST00000507624 621 ntBASIC21.1■□□□□ 0.97
RNF223E7ERA6 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF223E7ERA6 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC21.09■□□□□ 0.97
RNF223E7ERA6 HES4-204ENST00000484667 667 ntTSL 3 BASIC21.09■□□□□ 0.97
RNF223E7ERA6 AC129492.7-201ENST00000622992 756 ntBASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms