Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LINC01548A6NM66 HLA-V-202ENST00000446817 847 ntBASIC20.18■□□□□ 0.82
LINC01548A6NM66 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC20.17■□□□□ 0.82
LINC01548A6NM66 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC20.17■□□□□ 0.82
LINC01548A6NM66 CHST11-202ENST00000546689 756 ntTSL 2 BASIC20.17■□□□□ 0.82
LINC01548A6NM66 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
LINC01548A6NM66 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LINC01548A6NM66 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LINC01548A6NM66 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
LINC01548A6NM66 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LINC01548A6NM66 AC110285.7-201ENST00000624417 1536 ntBASIC20.16■□□□□ 0.82
LINC01548A6NM66 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LINC01548A6NM66 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
LINC01548A6NM66 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC20.15■□□□□ 0.82
LINC01548A6NM66 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LINC01548A6NM66 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LINC01548A6NM66 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LINC01548A6NM66 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LINC01548A6NM66 SHF-206ENST00000560471 2499 ntTSL 5 BASIC20.14■□□□□ 0.82
LINC01548A6NM66 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC20.14■□□□□ 0.81
LINC01548A6NM66 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
LINC01548A6NM66 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
LINC01548A6NM66 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LINC01548A6NM66 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LINC01548A6NM66 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LINC01548A6NM66 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
LINC01548A6NM66 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LINC01548A6NM66 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LINC01548A6NM66 MIR639-201ENST00000384974 98 ntBASIC20.11■□□□□ 0.81
LINC01548A6NM66 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
LINC01548A6NM66 METRNL-202ENST00000570778 967 ntTSL 5 BASIC20.11■□□□□ 0.81
LINC01548A6NM66 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LINC01548A6NM66 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LINC01548A6NM66 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC20.1■□□□□ 0.81
LINC01548A6NM66 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LINC01548A6NM66 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LINC01548A6NM66 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LINC01548A6NM66 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LINC01548A6NM66 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LINC01548A6NM66 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
LINC01548A6NM66 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
LINC01548A6NM66 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
LINC01548A6NM66 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
LINC01548A6NM66 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
LINC01548A6NM66 PEX7-203ENST00000541292 945 ntTSL 5 BASIC20.07■□□□□ 0.8
LINC01548A6NM66 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC20.07■□□□□ 0.8
LINC01548A6NM66 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
LINC01548A6NM66 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC20.06■□□□□ 0.8
LINC01548A6NM66 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LINC01548A6NM66 DRD5P2-201ENST00000421395 2012 ntBASIC20.05■□□□□ 0.8
LINC01548A6NM66 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LINC01548A6NM66 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LINC01548A6NM66 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
LINC01548A6NM66 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
LINC01548A6NM66 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LINC01548A6NM66 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LINC01548A6NM66 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
LINC01548A6NM66 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
LINC01548A6NM66 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC20.03■□□□□ 0.8
LINC01548A6NM66 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
LINC01548A6NM66 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LINC01548A6NM66 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
LINC01548A6NM66 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
LINC01548A6NM66 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
LINC01548A6NM66 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LINC01548A6NM66 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
LINC01548A6NM66 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LINC01548A6NM66 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
LINC01548A6NM66 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LINC01548A6NM66 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LINC01548A6NM66 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LINC01548A6NM66 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC20.01■□□□□ 0.79
LINC01548A6NM66 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
LINC01548A6NM66 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LINC01548A6NM66 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC20■□□□□ 0.79
LINC01548A6NM66 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC20■□□□□ 0.79
LINC01548A6NM66 MIR4449-201ENST00000578365 66 ntBASIC20■□□□□ 0.79
LINC01548A6NM66 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LINC01548A6NM66 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC20■□□□□ 0.79
LINC01548A6NM66 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
LINC01548A6NM66 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LINC01548A6NM66 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LINC01548A6NM66 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LINC01548A6NM66 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LINC01548A6NM66 AP002414.2-202ENST00000590929 1450 ntBASIC19.99■□□□□ 0.79
LINC01548A6NM66 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
LINC01548A6NM66 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
LINC01548A6NM66 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC19.98■□□□□ 0.79
LINC01548A6NM66 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
LINC01548A6NM66 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LINC01548A6NM66 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
LINC01548A6NM66 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
LINC01548A6NM66 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
LINC01548A6NM66 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LINC01548A6NM66 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC19.96■□□□□ 0.79
LINC01548A6NM66 RPS2-210ENST00000530225 765 ntTSL 2 BASIC19.96■□□□□ 0.79
LINC01548A6NM66 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC19.95■□□□□ 0.78
LINC01548A6NM66 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
LINC01548A6NM66 AC008813.1-201ENST00000536597 885 ntBASIC19.95■□□□□ 0.78
LINC01548A6NM66 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms