Protein–RNA interactions for Protein: A0A0A0MRZ8

IGKV3D-11, Immunoglobulin kappa variable 3D-11, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3D-11A0A0A0MRZ8 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
IGKV3D-11A0A0A0MRZ8 AC139426.1-201ENST00000568218 2529 ntBASIC23.84■■□□□ 1.41
IGKV3D-11A0A0A0MRZ8 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
IGKV3D-11A0A0A0MRZ8 METRNL-202ENST00000570778 967 ntTSL 5 BASIC23.84■■□□□ 1.41
IGKV3D-11A0A0A0MRZ8 MIR4449-201ENST00000578365 66 ntBASIC23.84■■□□□ 1.41
IGKV3D-11A0A0A0MRZ8 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
IGKV3D-11A0A0A0MRZ8 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
IGKV3D-11A0A0A0MRZ8 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
IGKV3D-11A0A0A0MRZ8 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC23.83■■□□□ 1.41
IGKV3D-11A0A0A0MRZ8 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC23.83■■□□□ 1.41
IGKV3D-11A0A0A0MRZ8 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC23.83■■□□□ 1.4
IGKV3D-11A0A0A0MRZ8 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC23.82■■□□□ 1.4
IGKV3D-11A0A0A0MRZ8 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
IGKV3D-11A0A0A0MRZ8 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
IGKV3D-11A0A0A0MRZ8 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
IGKV3D-11A0A0A0MRZ8 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC23.81■■□□□ 1.4
IGKV3D-11A0A0A0MRZ8 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC23.81■■□□□ 1.4
IGKV3D-11A0A0A0MRZ8 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
IGKV3D-11A0A0A0MRZ8 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
IGKV3D-11A0A0A0MRZ8 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
IGKV3D-11A0A0A0MRZ8 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
IGKV3D-11A0A0A0MRZ8 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
IGKV3D-11A0A0A0MRZ8 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
IGKV3D-11A0A0A0MRZ8 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC23.8■■□□□ 1.4
IGKV3D-11A0A0A0MRZ8 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC23.8■■□□□ 1.4
IGKV3D-11A0A0A0MRZ8 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
IGKV3D-11A0A0A0MRZ8 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC23.79■■□□□ 1.4
IGKV3D-11A0A0A0MRZ8 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
IGKV3D-11A0A0A0MRZ8 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
IGKV3D-11A0A0A0MRZ8 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
IGKV3D-11A0A0A0MRZ8 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC23.78■■□□□ 1.4
IGKV3D-11A0A0A0MRZ8 RPS2-210ENST00000530225 765 ntTSL 2 BASIC23.78■■□□□ 1.4
IGKV3D-11A0A0A0MRZ8 AC008813.1-201ENST00000536597 885 ntBASIC23.78■■□□□ 1.4
IGKV3D-11A0A0A0MRZ8 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
IGKV3D-11A0A0A0MRZ8 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
IGKV3D-11A0A0A0MRZ8 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
IGKV3D-11A0A0A0MRZ8 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
IGKV3D-11A0A0A0MRZ8 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
IGKV3D-11A0A0A0MRZ8 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
IGKV3D-11A0A0A0MRZ8 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
IGKV3D-11A0A0A0MRZ8 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
IGKV3D-11A0A0A0MRZ8 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
IGKV3D-11A0A0A0MRZ8 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
IGKV3D-11A0A0A0MRZ8 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC23.75■■□□□ 1.39
IGKV3D-11A0A0A0MRZ8 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC23.75■■□□□ 1.39
IGKV3D-11A0A0A0MRZ8 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
IGKV3D-11A0A0A0MRZ8 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC23.74■■□□□ 1.39
IGKV3D-11A0A0A0MRZ8 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC23.74■■□□□ 1.39
IGKV3D-11A0A0A0MRZ8 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC23.74■■□□□ 1.39
IGKV3D-11A0A0A0MRZ8 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
IGKV3D-11A0A0A0MRZ8 AP002414.2-202ENST00000590929 1450 ntBASIC23.74■■□□□ 1.39
IGKV3D-11A0A0A0MRZ8 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
IGKV3D-11A0A0A0MRZ8 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
IGKV3D-11A0A0A0MRZ8 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC23.73■■□□□ 1.39
IGKV3D-11A0A0A0MRZ8 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
IGKV3D-11A0A0A0MRZ8 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
IGKV3D-11A0A0A0MRZ8 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
IGKV3D-11A0A0A0MRZ8 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
IGKV3D-11A0A0A0MRZ8 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC23.71■■□□□ 1.39
IGKV3D-11A0A0A0MRZ8 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
IGKV3D-11A0A0A0MRZ8 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
IGKV3D-11A0A0A0MRZ8 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
IGKV3D-11A0A0A0MRZ8 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC23.69■■□□□ 1.38
IGKV3D-11A0A0A0MRZ8 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
IGKV3D-11A0A0A0MRZ8 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
IGKV3D-11A0A0A0MRZ8 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
IGKV3D-11A0A0A0MRZ8 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
IGKV3D-11A0A0A0MRZ8 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
IGKV3D-11A0A0A0MRZ8 AC148477.6-201ENST00000623746 465 ntBASIC23.68■■□□□ 1.38
IGKV3D-11A0A0A0MRZ8 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
IGKV3D-11A0A0A0MRZ8 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
IGKV3D-11A0A0A0MRZ8 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
IGKV3D-11A0A0A0MRZ8 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
IGKV3D-11A0A0A0MRZ8 PROC-203ENST00000409048 1586 ntTSL 5 BASIC23.67■■□□□ 1.38
IGKV3D-11A0A0A0MRZ8 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
IGKV3D-11A0A0A0MRZ8 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
IGKV3D-11A0A0A0MRZ8 DRD5P2-201ENST00000421395 2012 ntBASIC23.67■■□□□ 1.38
IGKV3D-11A0A0A0MRZ8 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
IGKV3D-11A0A0A0MRZ8 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
IGKV3D-11A0A0A0MRZ8 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC23.66■■□□□ 1.38
IGKV3D-11A0A0A0MRZ8 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
IGKV3D-11A0A0A0MRZ8 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
IGKV3D-11A0A0A0MRZ8 CHST11-203ENST00000547956 936 ntTSL 2 BASIC23.66■■□□□ 1.38
IGKV3D-11A0A0A0MRZ8 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
IGKV3D-11A0A0A0MRZ8 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
IGKV3D-11A0A0A0MRZ8 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
IGKV3D-11A0A0A0MRZ8 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
IGKV3D-11A0A0A0MRZ8 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC23.65■■□□□ 1.38
IGKV3D-11A0A0A0MRZ8 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
IGKV3D-11A0A0A0MRZ8 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
IGKV3D-11A0A0A0MRZ8 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.38
IGKV3D-11A0A0A0MRZ8 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
IGKV3D-11A0A0A0MRZ8 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
IGKV3D-11A0A0A0MRZ8 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.38
IGKV3D-11A0A0A0MRZ8 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
IGKV3D-11A0A0A0MRZ8 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
IGKV3D-11A0A0A0MRZ8 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
IGKV3D-11A0A0A0MRZ8 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
IGKV3D-11A0A0A0MRZ8 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
IGKV3D-11A0A0A0MRZ8 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC23.64■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms