Protein–RNA interactions for Protein: Q9Y5F6

PCDHGC5, Protocadherin gamma-C5, humanhuman

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC5Q9Y5F6 DUX4L24-201ENST00000617576 1269 ntBASIC28.27■■■□□ 2.12
PCDHGC5Q9Y5F6 DUX4L22-201ENST00000618238 1269 ntBASIC28.27■■■□□ 2.12
PCDHGC5Q9Y5F6 DUX4L20-201ENST00000619712 1269 ntBASIC28.27■■■□□ 2.12
PCDHGC5Q9Y5F6 DUX4L21-201ENST00000622058 1269 ntBASIC28.27■■■□□ 2.12
PCDHGC5Q9Y5F6 DUX4L10-201ENST00000622460 1267 ntBASIC28.27■■■□□ 2.12
PCDHGC5Q9Y5F6 DUX4L25-201ENST00000624915 1269 ntBASIC28.27■■■□□ 2.12
PCDHGC5Q9Y5F6 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
PCDHGC5Q9Y5F6 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC28.26■■■□□ 2.11
PCDHGC5Q9Y5F6 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC28.25■■■□□ 2.11
PCDHGC5Q9Y5F6 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC28.25■■■□□ 2.11
PCDHGC5Q9Y5F6 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC28.24■■■□□ 2.11
PCDHGC5Q9Y5F6 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
PCDHGC5Q9Y5F6 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
PCDHGC5Q9Y5F6 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
PCDHGC5Q9Y5F6 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC28.23■■■□□ 2.11
PCDHGC5Q9Y5F6 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
PCDHGC5Q9Y5F6 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
PCDHGC5Q9Y5F6 HES6-205ENST00000409356 528 ntTSL 2 BASIC28.22■■■□□ 2.11
PCDHGC5Q9Y5F6 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC28.22■■■□□ 2.11
PCDHGC5Q9Y5F6 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
PCDHGC5Q9Y5F6 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC28.21■■■□□ 2.11
PCDHGC5Q9Y5F6 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC28.21■■■□□ 2.11
PCDHGC5Q9Y5F6 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC28.21■■■□□ 2.11
PCDHGC5Q9Y5F6 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
PCDHGC5Q9Y5F6 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC28.19■■■□□ 2.1
PCDHGC5Q9Y5F6 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC28.19■■■□□ 2.1
PCDHGC5Q9Y5F6 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC28.19■■■□□ 2.1
PCDHGC5Q9Y5F6 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC28.19■■■□□ 2.1
PCDHGC5Q9Y5F6 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC28.19■■■□□ 2.1
PCDHGC5Q9Y5F6 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC28.19■■■□□ 2.1
PCDHGC5Q9Y5F6 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
PCDHGC5Q9Y5F6 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC28.17■■■□□ 2.1
PCDHGC5Q9Y5F6 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
PCDHGC5Q9Y5F6 CHML-204ENST00000638121 920 ntTSL 2 BASIC28.17■■■□□ 2.1
PCDHGC5Q9Y5F6 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
PCDHGC5Q9Y5F6 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
PCDHGC5Q9Y5F6 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC28.16■■■□□ 2.1
PCDHGC5Q9Y5F6 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
PCDHGC5Q9Y5F6 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
PCDHGC5Q9Y5F6 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC28.15■■■□□ 2.1
PCDHGC5Q9Y5F6 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
PCDHGC5Q9Y5F6 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
PCDHGC5Q9Y5F6 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
PCDHGC5Q9Y5F6 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
PCDHGC5Q9Y5F6 EI24-212ENST00000615917 1407 ntTSL 2 BASIC28.13■■■□□ 2.09
PCDHGC5Q9Y5F6 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
PCDHGC5Q9Y5F6 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
PCDHGC5Q9Y5F6 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC28.13■■■□□ 2.09
PCDHGC5Q9Y5F6 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC28.13■■■□□ 2.09
PCDHGC5Q9Y5F6 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC28.12■■■□□ 2.09
PCDHGC5Q9Y5F6 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
PCDHGC5Q9Y5F6 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC28.12■■■□□ 2.09
PCDHGC5Q9Y5F6 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC28.11■■■□□ 2.09
PCDHGC5Q9Y5F6 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
PCDHGC5Q9Y5F6 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC28.11■■■□□ 2.09
PCDHGC5Q9Y5F6 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
PCDHGC5Q9Y5F6 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC28.1■■■□□ 2.09
PCDHGC5Q9Y5F6 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC28.09■■■□□ 2.09
PCDHGC5Q9Y5F6 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
PCDHGC5Q9Y5F6 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
PCDHGC5Q9Y5F6 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC28.08■■■□□ 2.09
PCDHGC5Q9Y5F6 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC28.08■■■□□ 2.09
PCDHGC5Q9Y5F6 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC28.08■■■□□ 2.09
PCDHGC5Q9Y5F6 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC28.08■■■□□ 2.09
PCDHGC5Q9Y5F6 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC28.07■■■□□ 2.08
PCDHGC5Q9Y5F6 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
PCDHGC5Q9Y5F6 SRP68-213ENST00000629930 165 ntTSL 5 BASIC28.07■■■□□ 2.08
PCDHGC5Q9Y5F6 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
PCDHGC5Q9Y5F6 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
PCDHGC5Q9Y5F6 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC28.06■■■□□ 2.08
PCDHGC5Q9Y5F6 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC28.06■■■□□ 2.08
PCDHGC5Q9Y5F6 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
PCDHGC5Q9Y5F6 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
PCDHGC5Q9Y5F6 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
PCDHGC5Q9Y5F6 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
PCDHGC5Q9Y5F6 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC28.03■■■□□ 2.08
PCDHGC5Q9Y5F6 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
PCDHGC5Q9Y5F6 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
PCDHGC5Q9Y5F6 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
PCDHGC5Q9Y5F6 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
PCDHGC5Q9Y5F6 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC28.02■■■□□ 2.08
PCDHGC5Q9Y5F6 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
PCDHGC5Q9Y5F6 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
PCDHGC5Q9Y5F6 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC28.02■■■□□ 2.08
PCDHGC5Q9Y5F6 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC28.02■■■□□ 2.08
PCDHGC5Q9Y5F6 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC28.02■■■□□ 2.08
PCDHGC5Q9Y5F6 RARRES2P2-201ENST00000394842 485 ntBASIC28.01■■■□□ 2.07
PCDHGC5Q9Y5F6 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
PCDHGC5Q9Y5F6 CHST11-202ENST00000546689 756 ntTSL 2 BASIC28.01■■■□□ 2.07
PCDHGC5Q9Y5F6 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
PCDHGC5Q9Y5F6 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
PCDHGC5Q9Y5F6 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
PCDHGC5Q9Y5F6 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC28■■■□□ 2.07
PCDHGC5Q9Y5F6 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC28■■■□□ 2.07
PCDHGC5Q9Y5F6 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
PCDHGC5Q9Y5F6 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
PCDHGC5Q9Y5F6 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC27.99■■■□□ 2.07
PCDHGC5Q9Y5F6 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC27.99■■■□□ 2.07
PCDHGC5Q9Y5F6 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
PCDHGC5Q9Y5F6 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms