Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 AL162393.1-201ENST00000437852 946 ntBASIC23.37■■□□□ 1.33
TUBA1AQ71U36 NRG1-221ENST00000614767 762 ntTSL 5 BASIC23.37■■□□□ 1.33
TUBA1AQ71U36 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
TUBA1AQ71U36 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
TUBA1AQ71U36 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC23.36■■□□□ 1.33
TUBA1AQ71U36 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TUBA1AQ71U36 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TUBA1AQ71U36 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TUBA1AQ71U36 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
TUBA1AQ71U36 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
TUBA1AQ71U36 RPS2P35-201ENST00000443417 897 ntBASIC23.35■■□□□ 1.33
TUBA1AQ71U36 AC005559.1-201ENST00000589661 871 ntBASIC23.35■■□□□ 1.33
TUBA1AQ71U36 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TUBA1AQ71U36 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
TUBA1AQ71U36 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TUBA1AQ71U36 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
TUBA1AQ71U36 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
TUBA1AQ71U36 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
TUBA1AQ71U36 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TUBA1AQ71U36 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC23.34■■□□□ 1.33
TUBA1AQ71U36 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC23.34■■□□□ 1.33
TUBA1AQ71U36 DUX4L28-201ENST00000623687 678 ntBASIC23.34■■□□□ 1.33
TUBA1AQ71U36 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
TUBA1AQ71U36 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
TUBA1AQ71U36 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
TUBA1AQ71U36 AP006261.1-201ENST00000584783 668 ntBASIC23.33■■□□□ 1.33
TUBA1AQ71U36 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
TUBA1AQ71U36 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
TUBA1AQ71U36 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
TUBA1AQ71U36 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
TUBA1AQ71U36 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC23.32■■□□□ 1.32
TUBA1AQ71U36 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
TUBA1AQ71U36 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC23.31■■□□□ 1.32
TUBA1AQ71U36 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC23.31■■□□□ 1.32
TUBA1AQ71U36 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
TUBA1AQ71U36 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
TUBA1AQ71U36 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TUBA1AQ71U36 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TUBA1AQ71U36 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
TUBA1AQ71U36 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
TUBA1AQ71U36 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC23.29■■□□□ 1.32
TUBA1AQ71U36 MIR3665-201ENST00000578708 105 ntBASIC23.29■■□□□ 1.32
TUBA1AQ71U36 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC23.28■■□□□ 1.32
TUBA1AQ71U36 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
TUBA1AQ71U36 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
TUBA1AQ71U36 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
TUBA1AQ71U36 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
TUBA1AQ71U36 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC23.27■■□□□ 1.31
TUBA1AQ71U36 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TUBA1AQ71U36 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TUBA1AQ71U36 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TUBA1AQ71U36 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TUBA1AQ71U36 RPS2-209ENST00000529806 993 ntTSL 3 BASIC23.25■■□□□ 1.31
TUBA1AQ71U36 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC23.25■■□□□ 1.31
TUBA1AQ71U36 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
TUBA1AQ71U36 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TUBA1AQ71U36 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
TUBA1AQ71U36 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC23.24■■□□□ 1.31
TUBA1AQ71U36 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
TUBA1AQ71U36 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
TUBA1AQ71U36 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TUBA1AQ71U36 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
TUBA1AQ71U36 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
TUBA1AQ71U36 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TUBA1AQ71U36 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
TUBA1AQ71U36 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TUBA1AQ71U36 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
TUBA1AQ71U36 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC23.21■■□□□ 1.31
TUBA1AQ71U36 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TUBA1AQ71U36 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TUBA1AQ71U36 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TUBA1AQ71U36 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC23.2■■□□□ 1.3
TUBA1AQ71U36 BX255925.1-201ENST00000566954 1854 ntBASIC23.2■■□□□ 1.3
TUBA1AQ71U36 AC087741.3-201ENST00000624270 1347 ntBASIC23.2■■□□□ 1.3
TUBA1AQ71U36 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TUBA1AQ71U36 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC23.2■■□□□ 1.3
TUBA1AQ71U36 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
TUBA1AQ71U36 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
TUBA1AQ71U36 AL449106.1-201ENST00000608517 1980 ntBASIC23.19■■□□□ 1.3
TUBA1AQ71U36 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TUBA1AQ71U36 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC23.18■■□□□ 1.3
TUBA1AQ71U36 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
TUBA1AQ71U36 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC23.18■■□□□ 1.3
TUBA1AQ71U36 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
TUBA1AQ71U36 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TUBA1AQ71U36 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC23.18■■□□□ 1.3
TUBA1AQ71U36 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
TUBA1AQ71U36 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC23.17■■□□□ 1.3
TUBA1AQ71U36 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
TUBA1AQ71U36 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC23.17■■□□□ 1.3
TUBA1AQ71U36 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TUBA1AQ71U36 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
TUBA1AQ71U36 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TUBA1AQ71U36 SHF-208ENST00000560734 1731 ntTSL 3 BASIC23.16■■□□□ 1.3
TUBA1AQ71U36 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TUBA1AQ71U36 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC23.16■■□□□ 1.3
TUBA1AQ71U36 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC23.16■■□□□ 1.3
TUBA1AQ71U36 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC23.16■■□□□ 1.3
TUBA1AQ71U36 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
TUBA1AQ71U36 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms