Protein–RNA interactions for Protein: Q5TH69

ARFGEF3, Brefeldin A-inhibited guanine nucleotide-exchange protein 3, humanhuman

Predictions only

Length 2,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF3Q5TH69 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
ARFGEF3Q5TH69 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
ARFGEF3Q5TH69 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
ARFGEF3Q5TH69 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
ARFGEF3Q5TH69 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
ARFGEF3Q5TH69 ST7-AS1-201ENST00000456775 1889 ntBASIC21.93■■□□□ 1.1
ARFGEF3Q5TH69 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC21.93■■□□□ 1.1
ARFGEF3Q5TH69 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
ARFGEF3Q5TH69 ST7-202ENST00000323984 2142 ntTSL 5 BASIC21.92■■□□□ 1.1
ARFGEF3Q5TH69 ST7-207ENST00000393449 2127 ntTSL 5 BASIC21.92■■□□□ 1.1
ARFGEF3Q5TH69 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
ARFGEF3Q5TH69 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
ARFGEF3Q5TH69 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
ARFGEF3Q5TH69 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
ARFGEF3Q5TH69 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
ARFGEF3Q5TH69 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
ARFGEF3Q5TH69 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
ARFGEF3Q5TH69 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.1
ARFGEF3Q5TH69 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC21.88■■□□□ 1.09
ARFGEF3Q5TH69 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
ARFGEF3Q5TH69 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC21.88■■□□□ 1.09
ARFGEF3Q5TH69 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
ARFGEF3Q5TH69 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC21.86■■□□□ 1.09
ARFGEF3Q5TH69 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC21.86■■□□□ 1.09
ARFGEF3Q5TH69 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
ARFGEF3Q5TH69 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC21.86■■□□□ 1.09
ARFGEF3Q5TH69 PEX7-203ENST00000541292 945 ntTSL 5 BASIC21.85■■□□□ 1.09
ARFGEF3Q5TH69 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
ARFGEF3Q5TH69 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC21.85■■□□□ 1.09
ARFGEF3Q5TH69 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC21.85■■□□□ 1.09
ARFGEF3Q5TH69 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
ARFGEF3Q5TH69 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
ARFGEF3Q5TH69 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
ARFGEF3Q5TH69 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
ARFGEF3Q5TH69 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
ARFGEF3Q5TH69 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC21.83■■□□□ 1.09
ARFGEF3Q5TH69 AC148477.6-201ENST00000623746 465 ntBASIC21.83■■□□□ 1.09
ARFGEF3Q5TH69 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
ARFGEF3Q5TH69 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
ARFGEF3Q5TH69 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC21.82■■□□□ 1.08
ARFGEF3Q5TH69 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
ARFGEF3Q5TH69 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC21.82■■□□□ 1.08
ARFGEF3Q5TH69 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC21.82■■□□□ 1.08
ARFGEF3Q5TH69 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
ARFGEF3Q5TH69 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
ARFGEF3Q5TH69 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC21.81■■□□□ 1.08
ARFGEF3Q5TH69 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC21.81■■□□□ 1.08
ARFGEF3Q5TH69 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
ARFGEF3Q5TH69 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
ARFGEF3Q5TH69 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ARFGEF3Q5TH69 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ARFGEF3Q5TH69 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ARFGEF3Q5TH69 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ARFGEF3Q5TH69 ABHD17AP3-201ENST00000503096 1137 ntBASIC21.8■■□□□ 1.08
ARFGEF3Q5TH69 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC21.8■■□□□ 1.08
ARFGEF3Q5TH69 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ARFGEF3Q5TH69 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ARFGEF3Q5TH69 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC21.8■■□□□ 1.08
ARFGEF3Q5TH69 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC21.8■■□□□ 1.08
ARFGEF3Q5TH69 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC21.8■■□□□ 1.08
ARFGEF3Q5TH69 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ARFGEF3Q5TH69 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
ARFGEF3Q5TH69 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ARFGEF3Q5TH69 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
ARFGEF3Q5TH69 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
ARFGEF3Q5TH69 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
ARFGEF3Q5TH69 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC21.78■■□□□ 1.08
ARFGEF3Q5TH69 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
ARFGEF3Q5TH69 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ARFGEF3Q5TH69 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ARFGEF3Q5TH69 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ARFGEF3Q5TH69 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
ARFGEF3Q5TH69 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ARFGEF3Q5TH69 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ARFGEF3Q5TH69 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ARFGEF3Q5TH69 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ARFGEF3Q5TH69 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ARFGEF3Q5TH69 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
ARFGEF3Q5TH69 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ARFGEF3Q5TH69 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ARFGEF3Q5TH69 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
ARFGEF3Q5TH69 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
ARFGEF3Q5TH69 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
ARFGEF3Q5TH69 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ARFGEF3Q5TH69 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
ARFGEF3Q5TH69 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ARFGEF3Q5TH69 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
ARFGEF3Q5TH69 BRD4-212ENST00000630599 726 ntTSL 2 BASIC21.74■■□□□ 1.07
ARFGEF3Q5TH69 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC21.74■■□□□ 1.07
ARFGEF3Q5TH69 RPS2-210ENST00000530225 765 ntTSL 2 BASIC21.74■■□□□ 1.07
ARFGEF3Q5TH69 TPT1-202ENST00000379055 948 ntTSL 2 BASIC21.73■■□□□ 1.07
ARFGEF3Q5TH69 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC21.73■■□□□ 1.07
ARFGEF3Q5TH69 ABCB10P1-201ENST00000614297 2181 ntBASIC21.73■■□□□ 1.07
ARFGEF3Q5TH69 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
ARFGEF3Q5TH69 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC21.72■■□□□ 1.07
ARFGEF3Q5TH69 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC21.72■■□□□ 1.07
ARFGEF3Q5TH69 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ARFGEF3Q5TH69 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
ARFGEF3Q5TH69 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
ARFGEF3Q5TH69 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 10 ms