Protein–RNA interactions for Protein: P80188

LCN2, Neutrophil gelatinase-associated lipocalin, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2P80188 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
LCN2P80188 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
LCN2P80188 CHST11-202ENST00000546689 756 ntTSL 2 BASIC21.43■■□□□ 1.02
LCN2P80188 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
LCN2P80188 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
LCN2P80188 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC21.42■■□□□ 1.02
LCN2P80188 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC21.42■■□□□ 1.02
LCN2P80188 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
LCN2P80188 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
LCN2P80188 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
LCN2P80188 ABCB10P1-201ENST00000614297 2181 ntBASIC21.41■■□□□ 1.02
LCN2P80188 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
LCN2P80188 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC21.41■■□□□ 1.02
LCN2P80188 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC21.41■■□□□ 1.02
LCN2P80188 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
LCN2P80188 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC21.4■■□□□ 1.02
LCN2P80188 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
LCN2P80188 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
LCN2P80188 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC21.4■■□□□ 1.02
LCN2P80188 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
LCN2P80188 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
LCN2P80188 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
LCN2P80188 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
LCN2P80188 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC21.39■■□□□ 1.02
LCN2P80188 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
LCN2P80188 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
LCN2P80188 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
LCN2P80188 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
LCN2P80188 SHF-206ENST00000560471 2499 ntTSL 5 BASIC21.38■■□□□ 1.01
LCN2P80188 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC21.38■■□□□ 1.01
LCN2P80188 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
LCN2P80188 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC21.38■■□□□ 1.01
LCN2P80188 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
LCN2P80188 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC21.37■■□□□ 1.01
LCN2P80188 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC21.37■■□□□ 1.01
LCN2P80188 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
LCN2P80188 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
LCN2P80188 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
LCN2P80188 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
LCN2P80188 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
LCN2P80188 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
LCN2P80188 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
LCN2P80188 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
LCN2P80188 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
LCN2P80188 WHAMMP2-203ENST00000563942 1603 ntBASIC21.34■■□□□ 1.01
LCN2P80188 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
LCN2P80188 AC135983.2-203ENST00000454486 1613 ntBASIC21.33■■□□□ 1.01
LCN2P80188 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
LCN2P80188 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
LCN2P80188 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
LCN2P80188 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC21.32■■□□□ 1
LCN2P80188 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC21.32■■□□□ 1
LCN2P80188 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
LCN2P80188 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
LCN2P80188 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC21.31■■□□□ 1
LCN2P80188 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
LCN2P80188 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LCN2P80188 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC21.31■■□□□ 1
LCN2P80188 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
LCN2P80188 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LCN2P80188 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LCN2P80188 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LCN2P80188 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
LCN2P80188 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC21.29■■□□□ 1
LCN2P80188 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
LCN2P80188 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
LCN2P80188 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
LCN2P80188 ST7-AS1-201ENST00000456775 1889 ntBASIC21.28■■□□□ 1
LCN2P80188 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LCN2P80188 ABHD17AP3-201ENST00000503096 1137 ntBASIC21.28■■□□□ 1
LCN2P80188 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC21.28■■□□□ 1
LCN2P80188 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC21.26■□□□□ 0.99
LCN2P80188 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
LCN2P80188 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LCN2P80188 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
LCN2P80188 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC21.26■□□□□ 0.99
LCN2P80188 HSD17B1P1-201ENST00000590052 955 ntBASIC21.26■□□□□ 0.99
LCN2P80188 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC21.26■□□□□ 0.99
LCN2P80188 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LCN2P80188 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LCN2P80188 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
LCN2P80188 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC21.25■□□□□ 0.99
LCN2P80188 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
LCN2P80188 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LCN2P80188 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC21.24■□□□□ 0.99
LCN2P80188 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
LCN2P80188 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
LCN2P80188 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
LCN2P80188 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
LCN2P80188 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
LCN2P80188 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
LCN2P80188 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
LCN2P80188 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
LCN2P80188 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
LCN2P80188 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
LCN2P80188 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
LCN2P80188 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
LCN2P80188 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LCN2P80188 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
LCN2P80188 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms