Protein–RNA interactions for Protein: P60510

PPP4C, Serine/threonine-protein phosphatase 4 catalytic subunit, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4CP60510 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
PPP4CP60510 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
PPP4CP60510 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC30.85■■■□□ 2.53
PPP4CP60510 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC30.85■■■□□ 2.53
PPP4CP60510 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC30.85■■■□□ 2.53
PPP4CP60510 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC30.84■■■□□ 2.53
PPP4CP60510 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
PPP4CP60510 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
PPP4CP60510 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC30.82■■■□□ 2.52
PPP4CP60510 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
PPP4CP60510 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC30.81■■■□□ 2.52
PPP4CP60510 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC30.81■■■□□ 2.52
PPP4CP60510 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC30.81■■■□□ 2.52
PPP4CP60510 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC30.81■■■□□ 2.52
PPP4CP60510 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC30.8■■■□□ 2.52
PPP4CP60510 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
PPP4CP60510 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
PPP4CP60510 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC30.79■■■□□ 2.52
PPP4CP60510 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC30.78■■■□□ 2.52
PPP4CP60510 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
PPP4CP60510 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
PPP4CP60510 HSD17B1P1-201ENST00000590052 955 ntBASIC30.78■■■□□ 2.52
PPP4CP60510 SRP68-213ENST00000629930 165 ntTSL 5 BASIC30.78■■■□□ 2.52
PPP4CP60510 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
PPP4CP60510 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
PPP4CP60510 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
PPP4CP60510 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
PPP4CP60510 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
PPP4CP60510 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
PPP4CP60510 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC30.77■■■□□ 2.52
PPP4CP60510 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC30.77■■■□□ 2.52
PPP4CP60510 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC30.77■■■□□ 2.52
PPP4CP60510 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC30.76■■■□□ 2.51
PPP4CP60510 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC30.76■■■□□ 2.51
PPP4CP60510 MEST-211ENST00000437945 1455 ntTSL 5 BASIC30.76■■■□□ 2.51
PPP4CP60510 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
PPP4CP60510 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC30.75■■■□□ 2.51
PPP4CP60510 ABHD17AP3-201ENST00000503096 1137 ntBASIC30.75■■■□□ 2.51
PPP4CP60510 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC30.75■■■□□ 2.51
PPP4CP60510 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
PPP4CP60510 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC30.75■■■□□ 2.51
PPP4CP60510 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
PPP4CP60510 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC30.74■■■□□ 2.51
PPP4CP60510 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC30.74■■■□□ 2.51
PPP4CP60510 AC110285.7-201ENST00000624417 1536 ntBASIC30.73■■■□□ 2.51
PPP4CP60510 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC30.73■■■□□ 2.51
PPP4CP60510 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC30.73■■■□□ 2.51
PPP4CP60510 AC008813.1-201ENST00000536597 885 ntBASIC30.73■■■□□ 2.51
PPP4CP60510 AP004833.2-201ENST00000532228 1454 ntBASIC30.73■■■□□ 2.51
PPP4CP60510 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
PPP4CP60510 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
PPP4CP60510 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC30.72■■■□□ 2.51
PPP4CP60510 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC30.72■■■□□ 2.51
PPP4CP60510 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC30.72■■■□□ 2.51
PPP4CP60510 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC30.7■■■□□ 2.51
PPP4CP60510 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC30.7■■■□□ 2.51
PPP4CP60510 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
PPP4CP60510 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC30.69■■■□□ 2.5
PPP4CP60510 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC30.69■■■□□ 2.5
PPP4CP60510 PEX7-203ENST00000541292 945 ntTSL 5 BASIC30.68■■■□□ 2.5
PPP4CP60510 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
PPP4CP60510 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
PPP4CP60510 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC30.67■■■□□ 2.5
PPP4CP60510 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
PPP4CP60510 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC30.66■■■□□ 2.5
PPP4CP60510 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC30.66■■■□□ 2.5
PPP4CP60510 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
PPP4CP60510 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC30.66■■■□□ 2.5
PPP4CP60510 ST7-205ENST00000393446 2114 ntTSL 5 BASIC30.65■■■□□ 2.5
PPP4CP60510 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC30.65■■■□□ 2.5
PPP4CP60510 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
PPP4CP60510 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
PPP4CP60510 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
PPP4CP60510 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC30.64■■■□□ 2.5
PPP4CP60510 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC30.64■■■□□ 2.5
PPP4CP60510 RPS2-210ENST00000530225 765 ntTSL 2 BASIC30.63■■■□□ 2.49
PPP4CP60510 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC30.63■■■□□ 2.49
PPP4CP60510 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
PPP4CP60510 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC30.62■■■□□ 2.49
PPP4CP60510 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
PPP4CP60510 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC30.62■■■□□ 2.49
PPP4CP60510 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC30.61■■■□□ 2.49
PPP4CP60510 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC30.61■■■□□ 2.49
PPP4CP60510 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
PPP4CP60510 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC30.6■■■□□ 2.49
PPP4CP60510 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
PPP4CP60510 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC30.6■■■□□ 2.49
PPP4CP60510 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC30.6■■■□□ 2.49
PPP4CP60510 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC30.6■■■□□ 2.49
PPP4CP60510 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
PPP4CP60510 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
PPP4CP60510 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC30.59■■■□□ 2.49
PPP4CP60510 CHST11-203ENST00000547956 936 ntTSL 2 BASIC30.59■■■□□ 2.49
PPP4CP60510 BRD4-212ENST00000630599 726 ntTSL 2 BASIC30.59■■■□□ 2.49
PPP4CP60510 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
PPP4CP60510 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC30.59■■■□□ 2.49
PPP4CP60510 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
PPP4CP60510 AC148477.6-201ENST00000623746 465 ntBASIC30.58■■■□□ 2.49
PPP4CP60510 TPT1-202ENST00000379055 948 ntTSL 2 BASIC30.57■■■□□ 2.48
PPP4CP60510 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC30.57■■■□□ 2.48
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms