Protein–RNA interactions for Protein: P14780

MMP9, Matrix metalloproteinase-9, humanhuman

Predictions only

Length 707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP9P14780 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC21.53■■□□□ 1.04
MMP9P14780 AC010864.1-201ENST00000609407 1511 ntBASIC21.53■■□□□ 1.04
MMP9P14780 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
MMP9P14780 AL135925.1-201ENST00000605920 1701 ntBASIC21.52■■□□□ 1.04
MMP9P14780 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC21.52■■□□□ 1.04
MMP9P14780 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC21.52■■□□□ 1.04
MMP9P14780 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
MMP9P14780 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
MMP9P14780 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
MMP9P14780 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
MMP9P14780 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
MMP9P14780 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
MMP9P14780 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
MMP9P14780 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
MMP9P14780 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
MMP9P14780 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
MMP9P14780 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
MMP9P14780 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
MMP9P14780 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
MMP9P14780 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
MMP9P14780 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC21.47■■□□□ 1.03
MMP9P14780 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
MMP9P14780 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
MMP9P14780 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC21.47■■□□□ 1.03
MMP9P14780 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC21.47■■□□□ 1.03
MMP9P14780 PVT1-219ENST00000523427 938 ntTSL 3 BASIC21.47■■□□□ 1.03
MMP9P14780 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
MMP9P14780 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
MMP9P14780 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
MMP9P14780 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
MMP9P14780 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
MMP9P14780 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
MMP9P14780 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
MMP9P14780 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC21.45■■□□□ 1.02
MMP9P14780 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
MMP9P14780 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
MMP9P14780 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
MMP9P14780 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC21.45■■□□□ 1.02
MMP9P14780 EI24-212ENST00000615917 1407 ntTSL 2 BASIC21.45■■□□□ 1.02
MMP9P14780 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
MMP9P14780 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
MMP9P14780 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC21.43■■□□□ 1.02
MMP9P14780 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
MMP9P14780 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
MMP9P14780 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
MMP9P14780 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
MMP9P14780 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
MMP9P14780 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
MMP9P14780 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
MMP9P14780 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
MMP9P14780 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC21.4■■□□□ 1.02
MMP9P14780 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
MMP9P14780 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
MMP9P14780 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
MMP9P14780 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC21.39■■□□□ 1.01
MMP9P14780 LINC01971-201ENST00000617888 1048 ntBASIC21.39■■□□□ 1.01
MMP9P14780 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
MMP9P14780 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
MMP9P14780 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
MMP9P14780 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC21.38■■□□□ 1.01
MMP9P14780 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
MMP9P14780 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
MMP9P14780 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC21.37■■□□□ 1.01
MMP9P14780 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
MMP9P14780 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
MMP9P14780 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
MMP9P14780 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC21.36■■□□□ 1.01
MMP9P14780 CREM-210ENST00000374721 2020 ntTSL 5 BASIC21.35■■□□□ 1.01
MMP9P14780 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
MMP9P14780 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
MMP9P14780 CALM3-209ENST00000597743 577 ntTSL 4 BASIC21.34■■□□□ 1.01
MMP9P14780 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
MMP9P14780 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
MMP9P14780 MACF1-219ENST00000484793 834 ntTSL 2 BASIC21.33■■□□□ 1.01
MMP9P14780 DUX4L11-201ENST00000611504 1267 ntBASIC21.33■■□□□ 1.01
MMP9P14780 DUX4L12-201ENST00000614593 1267 ntBASIC21.33■■□□□ 1.01
MMP9P14780 DUX4L14-201ENST00000621227 1267 ntBASIC21.33■■□□□ 1.01
MMP9P14780 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
MMP9P14780 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC21.32■■□□□ 1
MMP9P14780 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC21.32■■□□□ 1
MMP9P14780 RNF166-209ENST00000567844 633 ntTSL 5 BASIC21.32■■□□□ 1
MMP9P14780 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
MMP9P14780 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC21.32■■□□□ 1
MMP9P14780 AL139393.2-201ENST00000608721 2025 ntBASIC21.31■■□□□ 1
MMP9P14780 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
MMP9P14780 HLA-V-202ENST00000446817 847 ntBASIC21.31■■□□□ 1
MMP9P14780 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC21.31■■□□□ 1
MMP9P14780 MBP-237ENST00000579129 1052 ntTSL 5 BASIC21.31■■□□□ 1
MMP9P14780 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
MMP9P14780 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
MMP9P14780 DRD5P2-201ENST00000421395 2012 ntBASIC21.31■■□□□ 1
MMP9P14780 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC21.31■■□□□ 1
MMP9P14780 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
MMP9P14780 AL121749.1-202ENST00000609313 2153 ntBASIC21.3■■□□□ 1
MMP9P14780 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
MMP9P14780 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC21.3■■□□□ 1
MMP9P14780 LINC00273-201ENST00000539813 1452 ntBASIC21.3■■□□□ 1
MMP9P14780 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
MMP9P14780 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
MMP9P14780 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC21.28■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms