Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
FOXN1O15353 ATP5G2P3-201ENST00000429083 425 ntBASIC30.95■■■□□ 2.55
FOXN1O15353 HES4-204ENST00000484667 667 ntTSL 3 BASIC30.94■■■□□ 2.54
FOXN1O15353 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC30.93■■■□□ 2.54
FOXN1O15353 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
FOXN1O15353 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
FOXN1O15353 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC30.92■■■□□ 2.54
FOXN1O15353 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
FOXN1O15353 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC30.91■■■□□ 2.54
FOXN1O15353 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC30.91■■■□□ 2.54
FOXN1O15353 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC30.9■■■□□ 2.54
FOXN1O15353 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
FOXN1O15353 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC30.9■■■□□ 2.54
FOXN1O15353 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
FOXN1O15353 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
FOXN1O15353 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
FOXN1O15353 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC30.88■■■□□ 2.53
FOXN1O15353 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
FOXN1O15353 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC30.88■■■□□ 2.53
FOXN1O15353 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
FOXN1O15353 KRT18P60-201ENST00000312876 1297 ntBASIC30.86■■■□□ 2.53
FOXN1O15353 TRIR-205ENST00000592273 783 ntTSL 3 BASIC30.86■■■□□ 2.53
FOXN1O15353 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC30.85■■■□□ 2.53
FOXN1O15353 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC30.84■■■□□ 2.53
FOXN1O15353 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC30.83■■■□□ 2.53
FOXN1O15353 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC30.83■■■□□ 2.53
FOXN1O15353 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC30.83■■■□□ 2.53
FOXN1O15353 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
FOXN1O15353 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
FOXN1O15353 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
FOXN1O15353 EI24-212ENST00000615917 1407 ntTSL 2 BASIC30.8■■■□□ 2.52
FOXN1O15353 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC30.79■■■□□ 2.52
FOXN1O15353 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC30.79■■■□□ 2.52
FOXN1O15353 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
FOXN1O15353 AL451085.2-201ENST00000605085 799 ntBASIC30.79■■■□□ 2.52
FOXN1O15353 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
FOXN1O15353 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC30.78■■■□□ 2.52
FOXN1O15353 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
FOXN1O15353 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC30.77■■■□□ 2.52
FOXN1O15353 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC30.76■■■□□ 2.51
FOXN1O15353 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
FOXN1O15353 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
FOXN1O15353 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
FOXN1O15353 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
FOXN1O15353 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
FOXN1O15353 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
FOXN1O15353 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
FOXN1O15353 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC30.73■■■□□ 2.51
FOXN1O15353 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC30.73■■■□□ 2.51
FOXN1O15353 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
FOXN1O15353 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC30.73■■■□□ 2.51
FOXN1O15353 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC30.72■■■□□ 2.51
FOXN1O15353 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
FOXN1O15353 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC30.71■■■□□ 2.51
FOXN1O15353 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC30.71■■■□□ 2.51
FOXN1O15353 AC131212.1-201ENST00000613771 668 ntBASIC30.71■■■□□ 2.51
FOXN1O15353 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
FOXN1O15353 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
FOXN1O15353 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
FOXN1O15353 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
FOXN1O15353 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC30.69■■■□□ 2.5
FOXN1O15353 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
FOXN1O15353 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC30.66■■■□□ 2.5
FOXN1O15353 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
FOXN1O15353 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
FOXN1O15353 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
FOXN1O15353 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC30.65■■■□□ 2.5
FOXN1O15353 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
FOXN1O15353 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
FOXN1O15353 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
FOXN1O15353 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC30.64■■■□□ 2.5
FOXN1O15353 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
FOXN1O15353 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC30.63■■■□□ 2.49
FOXN1O15353 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC30.63■■■□□ 2.49
FOXN1O15353 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC30.63■■■□□ 2.49
FOXN1O15353 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
FOXN1O15353 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC30.62■■■□□ 2.49
FOXN1O15353 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC30.62■■■□□ 2.49
FOXN1O15353 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
FOXN1O15353 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
FOXN1O15353 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
FOXN1O15353 ABCB10P1-201ENST00000614297 2181 ntBASIC30.59■■■□□ 2.49
FOXN1O15353 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC30.59■■■□□ 2.49
FOXN1O15353 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC30.59■■■□□ 2.49
FOXN1O15353 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC30.58■■■□□ 2.49
FOXN1O15353 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
FOXN1O15353 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC30.58■■■□□ 2.49
FOXN1O15353 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
FOXN1O15353 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
FOXN1O15353 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC30.57■■■□□ 2.48
FOXN1O15353 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC30.57■■■□□ 2.48
FOXN1O15353 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC30.57■■■□□ 2.48
FOXN1O15353 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC30.57■■■□□ 2.48
FOXN1O15353 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC30.57■■■□□ 2.48
FOXN1O15353 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
FOXN1O15353 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
FOXN1O15353 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
FOXN1O15353 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
FOXN1O15353 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC30.56■■■□□ 2.48
FOXN1O15353 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC30.56■■■□□ 2.48
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms