Protein–RNA interactions for Protein: P49588

AARS, Alanine--tRNA ligase, cytoplasmic, humanhuman

Known RBP eCLIP

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AARSP49588 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC34.06■■■■□ 3.048e-8■□□□□ 9.4
AARSP49588 EIF4G1-224ENST00000444861 2384 ntTSL 1 (best)25.23■■□□□ 1.638e-8■□□□□ 9.4
AARSP49588 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.328e-8■□□□□ 9.4
AARSP49588 XPO1-206ENST00000428210 6776 ntTSL 213.9□□□□□ -0.188e-8■□□□□ 9.4
AARSP49588 XPO1-203ENST00000406957 3479 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.978e-8■□□□□ 9.4
AARSP49588 PPP2CB-207ENST00000520500 603 ntTSL 46.62□□□□□ -1.358e-8■□□□□ 9.4
AARSP49588 XPO1-209ENST00000443240 565 ntTSL 45.05□□□□□ -1.68e-8■□□□□ 9.4
AARSP49588 PPP2CB-202ENST00000518243 577 ntTSL 34.7□□□□□ -1.668e-8■□□□□ 9.4
AARSP49588 XPO1-207ENST00000436018 318 ntTSL 44.41□□□□□ -1.78e-8■□□□□ 9.4
AARSP49588 SEMA4C-202ENST00000442264 817 ntTSL 322.15■■□□□ 1.148e-7■□□□□ 9.4
AARSP49588 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.278e-7■□□□□ 9.4
AARSP49588 SEMA4C-203ENST00000449330 839 ntTSL 315.81■□□□□ 0.128e-7■□□□□ 9.4
AARSP49588 CNOT2-206ENST00000547780 582 ntTSL 523.1■■□□□ 1.294e-6■□□□□ 9.4
AARSP49588 CNOT2-227ENST00000551043 2288 ntTSL 220.84■□□□□ 0.934e-6■□□□□ 9.4
AARSP49588 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.784e-6■□□□□ 9.4
AARSP49588 CNOT2-236ENST00000552231 1545 ntTSL 218.87■□□□□ 0.614e-6■□□□□ 9.4
AARSP49588 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.494e-6■□□□□ 9.4
AARSP49588 CNOT2-209ENST00000548159 2549 ntTSL 1 (best)17.74■□□□□ 0.434e-6■□□□□ 9.4
AARSP49588 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.424e-6■□□□□ 9.4
AARSP49588 RBM39-215ENST00000442447 644 ntTSL 217.55■□□□□ 0.44e-6■□□□□ 9.4
AARSP49588 RBM39-205ENST00000397370 612 ntTSL 2 BASIC17.41■□□□□ 0.384e-6■□□□□ 9.4
AARSP49588 RBM39-204ENST00000374038 1026 ntTSL 516.9■□□□□ 0.34e-6■□□□□ 9.4
AARSP49588 RBM39-219ENST00000453310 1068 ntTSL 216.9■□□□□ 0.34e-6■□□□□ 9.4
AARSP49588 RBM39-213ENST00000433027 611 ntTSL 516.47■□□□□ 0.234e-6■□□□□ 9.4
AARSP49588 RBM39-212ENST00000429968 2149 ntTSL 215.11■□□□□ 0.014e-6■□□□□ 9.4
AARSP49588 RBM39-207ENST00000412738 1018 ntTSL 314.91□□□□□ -0.024e-6■□□□□ 9.4
AARSP49588 CNOT2-220ENST00000549750 1085 ntTSL 514.9□□□□□ -0.024e-6■□□□□ 9.4
AARSP49588 RBM39-216ENST00000444878 2124 ntTSL 214.65□□□□□ -0.064e-6■□□□□ 9.4
AARSP49588 RBM39-243ENST00000528062 2421 ntTSL 1 (best) BASIC14.42□□□□□ -0.14e-6■□□□□ 9.4
AARSP49588 SLC39A7-204ENST00000463972 1410 ntTSL 214.2□□□□□ -0.144e-6■□□□□ 9.4
AARSP49588 RBM39-203ENST00000361162 2831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.24e-6■□□□□ 9.4
AARSP49588 RBM39-202ENST00000338163 2792 ntTSL 213.29□□□□□ -0.284e-6■□□□□ 9.4
AARSP49588 RBM39-206ENST00000403542 2883 ntTSL 213.26□□□□□ -0.294e-6■□□□□ 9.4
AARSP49588 CNOT2-202ENST00000418359 3152 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.324e-6■□□□□ 9.4
AARSP49588 RBM39-245ENST00000639702 5914 ntTSL 512.93□□□□□ -0.344e-6■□□□□ 9.4
AARSP49588 CNOT2-241ENST00000552915 1071 ntTSL 512.89□□□□□ -0.354e-6■□□□□ 9.4
AARSP49588 DDX5-224ENST00000583239 474 ntTSL 412.49□□□□□ -0.414e-6■□□□□ 9.4
AARSP49588 TUBA1C-209ENST00000552448 1800 ntTSL 312.46□□□□□ -0.424e-6■□□□□ 9.4
AARSP49588 CNOT2-223ENST00000550160 993 ntTSL 512.41□□□□□ -0.424e-6■□□□□ 9.4
AARSP49588 RBM39-223ENST00000463004 4580 ntTSL 512.11□□□□□ -0.474e-6■□□□□ 9.4
AARSP49588 CNOT2-201ENST00000229195 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.514e-6■□□□□ 9.4
AARSP49588 CNOT2-239ENST00000552483 895 ntTSL 511.76□□□□□ -0.534e-6■□□□□ 9.4
AARSP49588 TUBA1C-202ENST00000541364 1695 ntTSL 2 BASIC11.64□□□□□ -0.554e-6■□□□□ 9.4
AARSP49588 CNOT2-205ENST00000547321 577 ntTSL 210.94□□□□□ -0.664e-6■□□□□ 9.4
AARSP49588 CNOT2-228ENST00000551132 618 ntTSL 310.94□□□□□ -0.664e-6■□□□□ 9.4
AARSP49588 CNOT2-242ENST00000553020 576 ntTSL 510.94□□□□□ -0.664e-6■□□□□ 9.4
AARSP49588 CNOT2-243ENST00000553078 440 ntTSL 310.94□□□□□ -0.664e-6■□□□□ 9.4
AARSP49588 RBM39-214ENST00000434927 716 ntTSL 510.16□□□□□ -0.784e-6■□□□□ 9.4
AARSP49588 TUBA1C-210ENST00000639419 1075 ntTSL 5 BASIC10.08□□□□□ -0.84e-6■□□□□ 9.4
AARSP49588 CNOT2-232ENST00000551661 571 ntTSL 49.84□□□□□ -0.834e-6■□□□□ 9.4
AARSP49588 CNOT2-207ENST00000547867 571 ntTSL 49.64□□□□□ -0.874e-6■□□□□ 9.4
AARSP49588 CNOT2-208ENST00000548021 724 ntTSL 29.08□□□□□ -0.964e-6■□□□□ 9.4
AARSP49588 CNOT2-214ENST00000548741 536 ntTSL 49.08□□□□□ -0.964e-6■□□□□ 9.4
AARSP49588 CNOT2-225ENST00000550641 964 ntTSL 59.08□□□□□ -0.964e-6■□□□□ 9.4
AARSP49588 RBM39-208ENST00000416108 577 ntTSL 48.95□□□□□ -0.984e-6■□□□□ 9.4
AARSP49588 RBM39-209ENST00000416529 594 ntTSL 38.28□□□□□ -1.084e-6■□□□□ 9.4
AARSP49588 DDX5-206ENST00000578190 582 ntTSL 38.06□□□□□ -1.124e-6■□□□□ 9.4
AARSP49588 RBM39-218ENST00000449489 432 ntTSL 57.96□□□□□ -1.144e-6■□□□□ 9.4
AARSP49588 CNOT2-217ENST00000549443 457 ntTSL 47.93□□□□□ -1.144e-6■□□□□ 9.4
AARSP49588 CNOT2-237ENST00000552319 783 ntTSL 57.93□□□□□ -1.144e-6■□□□□ 9.4
AARSP49588 CNOT2-212ENST00000548599 643 ntTSL 57.79□□□□□ -1.164e-6■□□□□ 9.4
AARSP49588 CNOT2-238ENST00000552422 443 ntTSL 37.17□□□□□ -1.264e-6■□□□□ 9.4
AARSP49588 DDX5-211ENST00000579091 531 ntTSL 47.12□□□□□ -1.274e-6■□□□□ 9.4
AARSP49588 CNOT2-224ENST00000550194 747 ntTSL 56.79□□□□□ -1.324e-6■□□□□ 9.4
AARSP49588 CNOT2-234ENST00000551873 677 ntTSL 56.79□□□□□ -1.324e-6■□□□□ 9.4
AARSP49588 RBM39-232ENST00000481037 687 ntTSL 35.64□□□□□ -1.514e-6■□□□□ 9.4
AARSP49588 DDX5-223ENST00000583212 543 ntTSL 45.55□□□□□ -1.524e-6■□□□□ 9.4
AARSP49588 RBM39-211ENST00000426951 840 ntTSL 1 (best)4.77□□□□□ -1.654e-6■□□□□ 9.4
AARSP49588 RBM39-231ENST00000477334 949 ntTSL 24.77□□□□□ -1.654e-6■□□□□ 9.4
AARSP49588 RBM39-210ENST00000425184 526 ntTSL 34.07□□□□□ -1.764e-6■□□□□ 9.4
AARSP49588 RBM39-220ENST00000455343 441 ntTSL 54□□□□□ -1.774e-6■□□□□ 9.4
AARSP49588 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.79□□□□□ -1.84e-6■□□□□ 9.4
AARSP49588 RBM39-234ENST00000487604 370 ntTSL 33.68□□□□□ -1.824e-6■□□□□ 9.4
AARSP49588 RBM39-221ENST00000461283 2415 ntTSL 53.48□□□□□ -1.854e-6■□□□□ 9.4
AARSP49588 SPN-204ENST00000561857 2077 nt11.63□□□□□ -0.553e-8■□□□□ 9.4
AARSP49588 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.741e-8■□□□□ 9.3
AARSP49588 PFDN2-202ENST00000468311 408 ntTSL 225.02■■□□□ 1.61e-8■□□□□ 9.3
AARSP49588 ATP5B-203ENST00000547808 705 ntTSL 520.66■□□□□ 0.91e-8■□□□□ 9.3
AARSP49588 ATP5B-207ENST00000551020 856 ntTSL 320.53■□□□□ 0.881e-8■□□□□ 9.3
AARSP49588 ATP5B-211ENST00000553007 814 ntTSL 520.53■□□□□ 0.881e-8■□□□□ 9.3
AARSP49588 ATP5B-210ENST00000552959 1085 ntTSL 320.34■□□□□ 0.851e-8■□□□□ 9.3
AARSP49588 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.371e-8■□□□□ 9.3
AARSP49588 ATP5B-205ENST00000548647 682 ntTSL 517.33■□□□□ 0.361e-8■□□□□ 9.3
AARSP49588 SMARCA4-210ENST00000586892 559 ntTSL 414.4□□□□□ -0.11e-8■□□□□ 9.3
AARSP49588 HIST1H4H-204ENST00000635491 1034 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.651e-8■□□□□ 9.3
AARSP49588 HIST1H4H-202ENST00000634560 1034 ntTSL 1 (best)10.99□□□□□ -0.651e-8■□□□□ 9.3
AARSP49588 HIST1H4H-201ENST00000377727 397 ntAPPRIS P1 BASIC10.36□□□□□ -0.751e-8■□□□□ 9.3
AARSP49588 CHD2-216ENST00000629104 649 ntTSL 59.59□□□□□ -0.871e-8■□□□□ 9.3
AARSP49588 HIST1H4H-203ENST00000634956 2163 ntTSL 58.45□□□□□ -1.061e-8■□□□□ 9.3
AARSP49588 ATP5B-204ENST00000548474 449 ntTSL 36.83□□□□□ -1.321e-8■□□□□ 9.3
AARSP49588 OAZ1-203ENST00000586054 2832 nt23.79■■□□□ 1.41e-8■□□□□ 9.2
AARSP49588 HMGN2-202ENST00000460563 1045 ntTSL 511.75□□□□□ -0.531e-29■□□□□ 9.2
AARSP49588 HMGN2-204ENST00000464888 565 ntTSL 211.48□□□□□ -0.571e-29■□□□□ 9.2
AARSP49588 HMGN2-203ENST00000463817 853 ntTSL 29.31□□□□□ -0.921e-29■□□□□ 9.2
AARSP49588 HMGN2-208ENST00000479815 1030 ntTSL 59.31□□□□□ -0.921e-29■□□□□ 9.2
AARSP49588 HMGN2-206ENST00000467700 932 ntTSL 28.08□□□□□ -1.121e-29■□□□□ 9.2
AARSP49588 HMGN2-201ENST00000361427 1191 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.21e-29■□□□□ 9.2
AARSP49588 HMGN2-207ENST00000468388 320 ntTSL 37.54□□□□□ -1.21e-29■□□□□ 9.2
AARSP49588 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.421e-29■□□□□ 9.2
AARSP49588 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC22.19■■□□□ 1.147e-6■□□□□ 9.2
Retrieved 100 of 8,200 protein–RNA pairs in 35.8 ms