RNA–Protein interactions for RNA: ENST00000453310.5

RBM39-219, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 1,068 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-219ENST00000453310 NISCHQ9Y2I1 1504 aa37.56■■■■□ 3.6
RBM39-219ENST00000453310 CCDC180Q9P1Z9 1646 aa33.27■■■□□ 2.92
RBM39-219ENST00000453310 ABCC9O60706 1549 aa32.22■■■□□ 2.75
RBM39-219ENST00000453310 ZCCHC6Q5VYS8 1495 aaKnown RBP31.38■■■□□ 2.61
RBM39-219ENST00000453310 DCAF8L2P0C7V8 631 aa31.2■■■□□ 2.59
RBM39-219ENST00000453310 NACADO15069 1562 aa31.19■■■□□ 2.58
RBM39-219ENST00000453310 RB1CC1Q8TDY2 1594 aa31.15■■■□□ 2.58
RBM39-219ENST00000453310 MYO15BQ96JP2 1530 aa31.09■■■□□ 2.57
RBM39-219ENST00000453310 DCAF1Q9Y4B6 1507 aa31.09■■■□□ 2.57
RBM39-219ENST00000453310 UNC13AQ9UPW8 1703 aa30.47■■■□□ 2.47
RBM39-219ENST00000453310 SCRIBQ14160 1630 aa30.39■■■□□ 2.46
RBM39-219ENST00000453310 BICRAQ9NZM4 1560 aa30.2■■■□□ 2.42
RBM39-219ENST00000453310 PABPN1Q86U42 306 aaKnown RBP eCLIP30.14■■■□□ 2.42
RBM39-219ENST00000453310 SHROOM4Q9ULL8 1493 aa29.9■■■□□ 2.38
RBM39-219ENST00000453310 EIF4G1Q04637 1599 aaKnown RBP29.38■■■□□ 2.29
RBM39-219ENST00000453310 DNAJC5BQ9UF47 199 aa29.24■■■□□ 2.27
RBM39-219ENST00000453310 CECR2Q9BXF3 1484 aa29.22■■■□□ 2.27
RBM39-219ENST00000453310 CC2D2AQ9P2K1 1620 aa29.17■■■□□ 2.26
RBM39-219ENST00000453310 BAZ1AQ9NRL2 1556 aaPredicted RBP29.09■■■□□ 2.25
RBM39-219ENST00000453310 SMARCA4P51532 1647 aa29.09■■■□□ 2.25
RBM39-219ENST00000453310 MROH2BQ7Z745 1585 aa28.96■■■□□ 2.23
RBM39-219ENST00000453310 ATAD2BQ9ULI0 1458 aa28.84■■■□□ 2.21
RBM39-219ENST00000453310 SMARCA2P51531 1590 aa28.82■■■□□ 2.2
RBM39-219ENST00000453310 PEG3Q9GZU2 1588 aa28.79■■■□□ 2.2
RBM39-219ENST00000453310 NCAPD3P42695 1498 aa28.75■■■□□ 2.19
RBM39-219ENST00000453310 RSF1Q96T23 1441 aaPredicted RBP28.73■■■□□ 2.19
RBM39-219ENST00000453310 HMGXB3Q12766 1538 aa28.67■■■□□ 2.18
RBM39-219ENST00000453310 WIZO95785 1651 aa28.67■■■□□ 2.18
RBM39-219ENST00000453310 BAZ1BQ9UIG0 1483 aaKnown RBP28.62■■■□□ 2.17
RBM39-219ENST00000453310 TOP2AP11388 1531 aaKnown RBP28.38■■■□□ 2.13
RBM39-219ENST00000453310 SUPT5HO00267 1087 aaKnown RBP28.22■■■□□ 2.11
RBM39-219ENST00000453310 CCDC88BA6NC98 1476 aa28.03■■■□□ 2.08
RBM39-219ENST00000453310 NESP48681 1621 aa27.98■■■□□ 2.07
RBM39-219ENST00000453310 LAMC3Q9Y6N6 1575 aa27.97■■■□□ 2.07
RBM39-219ENST00000453310 CADPSQ9ULU8 1353 aa27.93■■■□□ 2.06
RBM39-219ENST00000453310 CFTRP13569 1480 aa27.85■■■□□ 2.05
RBM39-219ENST00000453310 ERCC6Q03468 1493 aa27.76■■■□□ 2.03
RBM39-219ENST00000453310 PDS5BQ9NTI5 1447 aa27.75■■■□□ 2.03
RBM39-219ENST00000453310 PRDM2Q13029 1718 aa27.71■■■□□ 2.03
RBM39-219ENST00000453310 KIF21AQ7Z4S6 1674 aa27.68■■■□□ 2.02
RBM39-219ENST00000453310 FANCD2Q9BXW9 1451 aa27.64■■■□□ 2.01
RBM39-219ENST00000453310 CEP164Q9UPV0 1460 aa27.57■■■□□ 2
RBM39-219ENST00000453310 THOC2Q8NI27 1593 aaKnown RBP27.52■■■□□ 2
RBM39-219ENST00000453310 MRC2Q9UBG0 1479 aa27.46■■□□□ 1.99
RBM39-219ENST00000453310 WDR62O43379 1518 aa27.37■■□□□ 1.97
RBM39-219ENST00000453310 CUX2O14529 1486 aa27.34■■□□□ 1.97
RBM39-219ENST00000453310 URB2Q14146 1524 aaKnown RBP27.34■■□□□ 1.97
RBM39-219ENST00000453310 ABCC8Q09428 1581 aa27.23■■□□□ 1.95
RBM39-219ENST00000453310 DNMBPQ6XZF7 1577 aa27.23■■□□□ 1.95
RBM39-219ENST00000453310 TOPBP1Q92547 1522 aa27.23■■□□□ 1.95
RBM39-219ENST00000453310 CUX1P39880 1505 aa27.16■■□□□ 1.94
RBM39-219ENST00000453310 WRNQ14191 1432 aaPredicted RBP eCLIP27.08■■□□□ 1.93
RBM39-219ENST00000453310 SYNJ1O43426 1573 aa27.02■■□□□ 1.92
RBM39-219ENST00000453310 POLA1P09884 1462 aaPredicted RBP27.02■■□□□ 1.92
RBM39-219ENST00000453310 TOP2BQ02880 1626 aa27.01■■□□□ 1.91
RBM39-219ENST00000453310 BIVM-ERCC5R4GMW8 1640 aa27.01■■□□□ 1.91
RBM39-219ENST00000453310 FGD5Q6ZNL6 1462 aa27■■□□□ 1.91
RBM39-219ENST00000453310 IFT140Q96RY7 1462 aa26.97■■□□□ 1.91
RBM39-219ENST00000453310 TARBP1Q13395 1621 aaKnown RBP26.91■■□□□ 1.9
RBM39-219ENST00000453310 SOGA1O94964 1423 aa26.9■■□□□ 1.9
RBM39-219ENST00000453310 RAD54L2Q9Y4B4 1467 aa26.89■■□□□ 1.9
RBM39-219ENST00000453310 ZNF608Q9ULD9 1512 aaPredicted RBP26.83■■□□□ 1.89
RBM39-219ENST00000453310 WDR97A6NE52 1622 aa26.79■■□□□ 1.88
RBM39-219ENST00000453310 EIF4G3O43432 1585 aaKnown RBP26.76■■□□□ 1.87
RBM39-219ENST00000453310 ABCA10Q8WWZ4 1543 aa26.75■■□□□ 1.87
RBM39-219ENST00000453310 AQRO60306 1485 aaKnown RBP eCLIP26.7■■□□□ 1.873e-11■■■■□ 23.7
RBM39-219ENST00000453310 TDRD9Q8NDG6 1382 aaKnown RBP26.7■■□□□ 1.86
RBM39-219ENST00000453310 ABCA5Q8WWZ7 1642 aa26.65■■□□□ 1.86
RBM39-219ENST00000453310 TRIM41Q8WV44 630 aa26.64■■□□□ 1.86
RBM39-219ENST00000453310 GAPVD1Q14C86 1478 aa26.61■■□□□ 1.85
RBM39-219ENST00000453310 PBRM1Q86U86 1689 aa26.57■■□□□ 1.84
RBM39-219ENST00000453310 GRIN2BQ13224 1484 aa26.55■■□□□ 1.84
RBM39-219ENST00000453310 CHIC1Q5VXU3 224 aa26.52■■□□□ 1.84
RBM39-219ENST00000453310 SNAPC4Q5SXM2 1469 aa26.49■■□□□ 1.83
RBM39-219ENST00000453310 KIF27Q86VH2 1401 aa26.49■■□□□ 1.83
RBM39-219ENST00000453310 MAGI1Q96QZ7 1491 aaPredicted RBP26.46■■□□□ 1.83
RBM39-219ENST00000453310 ERICH3Q5RHP9 1530 aa26.44■■□□□ 1.82
RBM39-219ENST00000453310 ADAMTS12P58397 1594 aa26.37■■□□□ 1.81
RBM39-219ENST00000453310 CHD1O14646 1710 aa26.36■■□□□ 1.81
RBM39-219ENST00000453310 RUSC2Q8N2Y8 1516 aa26.35■■□□□ 1.81
RBM39-219ENST00000453310 SYNJ2O15056 1496 aa26.35■■□□□ 1.81
RBM39-219ENST00000453310 IGF1RP08069 1367 aa26.33■■□□□ 1.8
RBM39-219ENST00000453310 FHAD1B1AJZ9 1412 aa26.31■■□□□ 1.8
RBM39-219ENST00000453310 FBLN2P98095 1184 aa26.3■■□□□ 1.8
RBM39-219ENST00000453310 CUL7Q14999 1698 aa26.28■■□□□ 1.8
RBM39-219ENST00000453310 CHMP7Q8WUX9 453 aaPredicted RBP26.28■■□□□ 1.8
RBM39-219ENST00000453310 GRIN2AQ12879 1464 aa26.23■■□□□ 1.79
RBM39-219ENST00000453310 OSCARQ8IYS5 282 aa26.22■■□□□ 1.79
RBM39-219ENST00000453310 EEA1Q15075 1411 aa26.2■■□□□ 1.78
RBM39-219ENST00000453310 CARMIL1Q5VZK9 1371 aa26.19■■□□□ 1.78
RBM39-219ENST00000453310 CEP170Q5SW79 1584 aa26.09■■□□□ 1.77
RBM39-219ENST00000453310 NUP160Q12769 1436 aa26.09■■□□□ 1.77
RBM39-219ENST00000453310 CSRNP3Q8WYN3 585 aa26.09■■□□□ 1.77
RBM39-219ENST00000453310 FAM9AQ8IZU1 332 aaPredicted RBP26.08■■□□□ 1.77
RBM39-219ENST00000453310 RAPGEF2Q9Y4G8 1499 aa26.08■■□□□ 1.77
RBM39-219ENST00000453310 CLASP1Q7Z460 1538 aa26.08■■□□□ 1.77
RBM39-219ENST00000453310 PRXQ9BXM0 1461 aa26.07■■□□□ 1.76
RBM39-219ENST00000453310 DNAJC5Q9H3Z4 198 aa26.07■■□□□ 1.76
RBM39-219ENST00000453310 KIF21BO75037 1637 aa25.93■■□□□ 1.74
RBM39-219ENST00000453310 KIAA0586Q9BVV6 1533 aa25.91■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms